EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000014771 (Gene tree)
Gene ID: 113018943
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 12240 bases
Position: chr3:22136566-22148805
Accession: 113018943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000021935	DUF382	PF04037.13	2.4e-58	1	1
ENSACLP00000021849	DUF382	PF04037.13	2.4e-58	1	1
ENSACLP00000021811	DUF382	PF04037.13	2.5e-58	1	1
ENSACLP00000021935	SAP	PF02037.27	8.7e-09	1	1
ENSACLP00000021849	SAP	PF02037.27	9.5e-09	1	1
ENSACLP00000021811	SAP	PF02037.27	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000022446	-	2478	-	ENSACLP00000021935	825 (aa)	-	-
ENSACLT00000022317	-	4711	-	ENSACLP00000021811	859 (aa)	XP_026018178	UPI000329CBCC
ENSACLT00000022358	-	4663	-	ENSACLP00000021849	843 (aa)	-	UPI0006491C0D

Gene Model

Click here to download ENSACLG00000014771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000014771's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000014771	sf3b2	87	74.708	ENSG00000087365	SF3B2	99	90.536	Homo_sapiens
ENSACLG00000014771	sf3b2	97	90.566	ENSAPOG00000001974	sf3b2	96	90.629	Acanthochromis_polyacanthus
ENSACLG00000014771	sf3b2	87	74.771	ENSAMEG00000017206	SF3B2	85	73.609	Ailuropoda_melanoleuca
ENSACLG00000014771	sf3b2	100	89.015	ENSACIG00000000624	sf3b2	100	88.788	Amphilophus_citrinellus
ENSACLG00000014771	sf3b2	100	87.126	ENSAOCG00000009207	sf3b2	100	89.323	Amphiprion_ocellaris
ENSACLG00000014771	sf3b2	100	89.782	ENSAPEG00000002762	sf3b2	97	89.667	Amphiprion_percula
ENSACLG00000014771	sf3b2	97	57.287	ENSACAG00000008615	SF3B2	85	60.131	Anolis_carolinensis
ENSACLG00000014771	sf3b2	87	74.708	ENSANAG00000029120	SF3B2	86	73.032	Aotus_nancymaae
ENSACLG00000014771	sf3b2	100	73.667	ENSAMXG00000007929	sf3b2	100	76.027	Astyanax_mexicanus
ENSACLG00000014771	sf3b2	87	75.131	ENSBTAG00000002778	SF3B2	85	73.834	Bos_taurus
ENSACLG00000014771	sf3b2	65	48.084	WBGene00021004	sftb-2	95	47.423	Caenorhabditis_elegans
ENSACLG00000014771	sf3b2	87	74.838	ENSCJAG00000001656	SF3B2	86	73.161	Callithrix_jacchus
ENSACLG00000014771	sf3b2	87	74.738	ENSCAFG00000013033	SF3B2	85	73.575	Canis_familiaris
ENSACLG00000014771	sf3b2	87	74.738	ENSCAFG00020015382	SF3B2	85	73.575	Canis_lupus_dingo
ENSACLG00000014771	sf3b2	87	75.000	ENSCHIG00000011211	SF3B2	85	73.834	Capra_hircus
ENSACLG00000014771	sf3b2	97	68.828	ENSTSYG00000000959	SF3B2	97	66.743	Carlito_syrichta
ENSACLG00000014771	sf3b2	50	61.628	ENSCAPG00000006065	SF3B2	79	89.831	Cavia_aperea
ENSACLG00000014771	sf3b2	77	71.095	ENSCPOG00000008294	SF3B2	84	68.795	Cavia_porcellus
ENSACLG00000014771	sf3b2	87	74.838	ENSCCAG00000035256	SF3B2	86	73.161	Cebus_capucinus
ENSACLG00000014771	sf3b2	87	74.708	ENSCATG00000042240	SF3B2	88	73.032	Cercocebus_atys
ENSACLG00000014771	sf3b2	87	73.595	ENSCLAG00000016852	SF3B2	86	71.613	Chinchilla_lanigera
ENSACLG00000014771	sf3b2	87	74.708	ENSCSAG00000008121	SF3B2	86	73.032	Chlorocebus_sabaeus
ENSACLG00000014771	sf3b2	89	88.265	ENSCHOG00000001476	SF3B2	78	80.612	Choloepus_hoffmanni
ENSACLG00000014771	sf3b2	98	66.330	ENSCPBG00000022465	SF3B2	87	80.408	Chrysemys_picta_bellii
ENSACLG00000014771	sf3b2	62	67.871	ENSCING00000005665	-	100	58.589	Ciona_intestinalis
ENSACLG00000014771	sf3b2	74	60.577	ENSCSAVG00000002029	-	99	58.786	Ciona_savignyi
ENSACLG00000014771	sf3b2	87	74.708	ENSCANG00000039680	SF3B2	86	73.032	Colobus_angolensis_palliatus
ENSACLG00000014771	sf3b2	97	68.445	ENSCGRG00001015741	Sf3b2	86	71.871	Cricetulus_griseus_chok1gshd
ENSACLG00000014771	sf3b2	97	68.445	ENSCGRG00000018110	Sf3b2	88	71.871	Cricetulus_griseus_crigri
ENSACLG00000014771	sf3b2	88	80.485	ENSCSEG00000000230	sf3b2	100	75.793	Cynoglossus_semilaevis
ENSACLG00000014771	sf3b2	100	84.713	ENSCVAG00000003357	sf3b2	100	83.908	Cyprinodon_variegatus
ENSACLG00000014771	sf3b2	97	72.203	ENSDARG00000018049	sf3b2	99	73.113	Danio_rerio
ENSACLG00000014771	sf3b2	97	68.927	ENSDNOG00000009484	SF3B2	94	73.446	Dasypus_novemcinctus
ENSACLG00000014771	sf3b2	85	73.896	ENSDORG00000002495	Sf3b2	85	71.742	Dipodomys_ordii
ENSACLG00000014771	sf3b2	74	81.567	ENSETEG00000020284	SF3B2	70	81.352	Echinops_telfairi
ENSACLG00000014771	sf3b2	99	55.328	ENSEBUG00000013703	sf3b2	99	56.142	Eptatretus_burgeri
ENSACLG00000014771	sf3b2	87	74.641	ENSEASG00005004508	SF3B2	85	73.196	Equus_asinus_asinus
ENSACLG00000014771	sf3b2	87	74.641	ENSECAG00000024461	SF3B2	85	73.196	Equus_caballus
ENSACLG00000014771	sf3b2	58	85.833	ENSEEUG00000014278	-	53	85.833	Erinaceus_europaeus
ENSACLG00000014771	sf3b2	100	78.564	ENSELUG00000005586	sf3b2	100	78.672	Esox_lucius
ENSACLG00000014771	sf3b2	87	74.869	ENSFCAG00000013289	SF3B2	85	73.705	Felis_catus
ENSACLG00000014771	sf3b2	79	66.815	ENSFALG00000014653	SF3B2	93	64.688	Ficedula_albicollis
ENSACLG00000014771	sf3b2	97	68.284	ENSFDAG00000019806	SF3B2	86	72.506	Fukomys_damarensis
ENSACLG00000014771	sf3b2	100	83.827	ENSFHEG00000020968	sf3b2	100	83.371	Fundulus_heteroclitus
ENSACLG00000014771	sf3b2	78	87.234	ENSGMOG00000012131	sf3b2	100	86.970	Gadus_morhua
ENSACLG00000014771	sf3b2	100	84.114	ENSGAFG00000001675	sf3b2	100	84.000	Gambusia_affinis
ENSACLG00000014771	sf3b2	78	88.754	ENSGACG00000019012	sf3b2	100	88.754	Gasterosteus_aculeatus
ENSACLG00000014771	sf3b2	98	68.259	ENSGAGG00000023916	SF3B2	86	74.215	Gopherus_agassizii
ENSACLG00000014771	sf3b2	79	90.141	ENSGGOG00000028448	SF3B2	84	90.141	Gorilla_gorilla
ENSACLG00000014771	sf3b2	100	99.534	ENSHBUG00000017349	sf3b2	100	99.534	Haplochromis_burtoni
ENSACLG00000014771	sf3b2	97	68.088	ENSHGLG00000010807	SF3B2	86	71.613	Heterocephalus_glaber_female
ENSACLG00000014771	sf3b2	97	68.701	ENSHGLG00100006361	SF3B2	86	72.903	Heterocephalus_glaber_male
ENSACLG00000014771	sf3b2	100	79.791	ENSHCOG00000016203	sf3b2	100	79.556	Hippocampus_comes
ENSACLG00000014771	sf3b2	100	72.848	ENSIPUG00000009383	sf3b2	100	72.626	Ictalurus_punctatus
ENSACLG00000014771	sf3b2	97	68.588	ENSSTOG00000028892	SF3B2	86	72.903	Ictidomys_tridecemlineatus
ENSACLG00000014771	sf3b2	97	67.775	ENSJJAG00000018193	Sf3b2	86	71.502	Jaculus_jaculus
ENSACLG00000014771	sf3b2	96	88.636	ENSKMAG00000020181	sf3b2	100	83.087	Kryptolebias_marmoratus
ENSACLG00000014771	sf3b2	100	88.927	ENSLBEG00000027739	sf3b2	100	89.041	Labrus_bergylta
ENSACLG00000014771	sf3b2	84	80.251	ENSLACG00000010429	SF3B2	100	65.604	Latimeria_chalumnae
ENSACLG00000014771	sf3b2	85	74.000	ENSLAFG00000002128	SF3B2	97	65.896	Loxodonta_africana
ENSACLG00000014771	sf3b2	87	74.611	ENSMFAG00000003064	SF3B2	88	72.938	Macaca_fascicularis
ENSACLG00000014771	sf3b2	87	70.665	ENSMMUG00000011743	SF3B2	86	69.301	Macaca_mulatta
ENSACLG00000014771	sf3b2	87	74.708	ENSMNEG00000034437	SF3B2	88	73.032	Macaca_nemestrina
ENSACLG00000014771	sf3b2	87	74.708	ENSMLEG00000029373	SF3B2	88	73.032	Mandrillus_leucophaeus
ENSACLG00000014771	sf3b2	100	88.952	ENSMAMG00000014103	sf3b2	100	89.522	Mastacembelus_armatus
ENSACLG00000014771	sf3b2	100	100.000	ENSMZEG00005020789	sf3b2	100	100.000	Maylandia_zebra
ENSACLG00000014771	sf3b2	97	68.927	ENSMICG00000008565	-	86	73.325	Microcebus_murinus
ENSACLG00000014771	sf3b2	97	67.720	ENSMICG00000016942	-	97	66.667	Microcebus_murinus
ENSACLG00000014771	sf3b2	97	67.684	ENSMOCG00000003136	Sf3b2	86	71.613	Microtus_ochrogaster
ENSACLG00000014771	sf3b2	100	82.910	ENSMMOG00000012928	sf3b2	100	81.062	Mola_mola
ENSACLG00000014771	sf3b2	87	73.788	ENSMODG00000008490	-	93	72.809	Monodelphis_domestica
ENSACLG00000014771	sf3b2	74	74.525	ENSMODG00000025020	-	99	72.118	Monodelphis_domestica
ENSACLG00000014771	sf3b2	100	83.562	ENSMALG00000015137	sf3b2	100	76.940	Monopterus_albus
ENSACLG00000014771	sf3b2	85	74.163	MGP_CAROLIEiJ_G0022539	Sf3b2	86	71.613	Mus_caroli
ENSACLG00000014771	sf3b2	97	67.972	ENSMUSG00000024853	Sf3b2	86	71.742	Mus_musculus
ENSACLG00000014771	sf3b2	97	67.742	MGP_PahariEiJ_G0014036	Sf3b2	86	71.613	Mus_pahari
ENSACLG00000014771	sf3b2	97	67.857	MGP_SPRETEiJ_G0023453	Sf3b2	86	72.000	Mus_spretus
ENSACLG00000014771	sf3b2	87	74.869	ENSMPUG00000011349	SF3B2	85	73.575	Mustela_putorius_furo
ENSACLG00000014771	sf3b2	87	74.607	ENSMLUG00000011136	SF3B2	85	73.575	Myotis_lucifugus
ENSACLG00000014771	sf3b2	85	73.572	ENSNGAG00000012103	Sf3b2	86	72.000	Nannospalax_galili
ENSACLG00000014771	sf3b2	87	71.373	ENSNLEG00000006007	SF3B2	86	71.026	Nomascus_leucogenys
ENSACLG00000014771	sf3b2	78	84.746	ENSMEUG00000000019	SF3B2	81	84.746	Notamacropus_eugenii
ENSACLG00000014771	sf3b2	100	63.676	ENSODEG00000017764	SF3B2	84	68.277	Octodon_degus
ENSACLG00000014771	sf3b2	100	96.211	ENSONIG00000013068	sf3b2	100	96.211	Oreochromis_niloticus
ENSACLG00000014771	sf3b2	78	86.607	ENSOANG00000012482	SF3B2	87	81.854	Ornithorhynchus_anatinus
ENSACLG00000014771	sf3b2	97	71.580	ENSOCUG00000015722	-	97	69.222	Oryctolagus_cuniculus
ENSACLG00000014771	sf3b2	58	50.097	ENSOCUG00000024154	-	100	43.273	Oryctolagus_cuniculus
ENSACLG00000014771	sf3b2	100	87.441	ENSORLG00000008235	sf3b2	97	87.192	Oryzias_latipes
ENSACLG00000014771	sf3b2	100	87.618	ENSORLG00020005357	sf3b2	100	87.192	Oryzias_latipes_hni
ENSACLG00000014771	sf3b2	100	87.854	ENSORLG00015022454	sf3b2	88	87.427	Oryzias_latipes_hsok
ENSACLG00000014771	sf3b2	100	86.423	ENSOMEG00000017480	sf3b2	100	86.659	Oryzias_melastigma
ENSACLG00000014771	sf3b2	100	63.867	ENSOGAG00000005799	SF3B2	86	69.744	Otolemur_garnettii
ENSACLG00000014771	sf3b2	97	67.701	ENSOARG00000002125	SF3B2	100	75.337	Ovis_aries
ENSACLG00000014771	sf3b2	97	68.403	ENSPPAG00000007359	SF3B2	88	71.950	Pan_paniscus
ENSACLG00000014771	sf3b2	87	74.869	ENSPPRG00000013334	SF3B2	85	73.705	Panthera_pardus
ENSACLG00000014771	sf3b2	87	74.869	ENSPTIG00000015022	SF3B2	85	73.705	Panthera_tigris_altaica
ENSACLG00000014771	sf3b2	97	68.131	ENSPTRG00000003912	SF3B2	88	71.950	Pan_troglodytes
ENSACLG00000014771	sf3b2	87	74.708	ENSPANG00000008593	SF3B2	88	73.032	Papio_anubis
ENSACLG00000014771	sf3b2	100	76.207	ENSPKIG00000016576	sf3b2	100	76.517	Paramormyrops_kingsleyae
ENSACLG00000014771	sf3b2	87	74.574	ENSPSIG00000003158	SF3B2	97	75.393	Pelodiscus_sinensis
ENSACLG00000014771	sf3b2	87	80.108	ENSPMGG00000000819	sf3b2	100	75.231	Periophthalmus_magnuspinnatus
ENSACLG00000014771	sf3b2	88	66.093	ENSPEMG00000015451	-	90	67.945	Peromyscus_maniculatus_bairdii
ENSACLG00000014771	sf3b2	97	68.088	ENSPEMG00000015437	Sf3b2	86	71.742	Peromyscus_maniculatus_bairdii
ENSACLG00000014771	sf3b2	87	73.622	ENSPCIG00000008381	SF3B2	99	68.735	Phascolarctos_cinereus
ENSACLG00000014771	sf3b2	100	84.589	ENSPFOG00000002552	sf3b2	100	84.211	Poecilia_formosa
ENSACLG00000014771	sf3b2	100	84.439	ENSPLAG00000001471	sf3b2	100	84.325	Poecilia_latipinna
ENSACLG00000014771	sf3b2	100	84.343	ENSPMEG00000013180	sf3b2	100	83.849	Poecilia_mexicana
ENSACLG00000014771	sf3b2	100	81.943	ENSPREG00000002665	sf3b2	100	83.314	Poecilia_reticulata
ENSACLG00000014771	sf3b2	59	69.043	ENSPPYG00000003034	-	79	66.667	Pongo_abelii
ENSACLG00000014771	sf3b2	87	75.130	ENSPCAG00000005129	SF3B2	97	65.795	Procavia_capensis
ENSACLG00000014771	sf3b2	97	68.475	ENSPCOG00000025375	SF3B2	86	73.067	Propithecus_coquereli
ENSACLG00000014771	sf3b2	57	93.421	ENSPVAG00000005466	-	81	93.421	Pteropus_vampyrus
ENSACLG00000014771	sf3b2	92	96.567	ENSPNYG00000023594	sf3b2	100	98.305	Pundamilia_nyererei
ENSACLG00000014771	sf3b2	100	75.196	ENSPNAG00000001891	sf3b2	100	75.224	Pygocentrus_nattereri
ENSACLG00000014771	sf3b2	85	73.838	ENSRNOG00000020412	Sf3b2	86	71.613	Rattus_norvegicus
ENSACLG00000014771	sf3b2	87	75.033	ENSRBIG00000034065	SF3B2	86	73.032	Rhinopithecus_bieti
ENSACLG00000014771	sf3b2	87	75.033	ENSRROG00000034496	SF3B2	86	73.032	Rhinopithecus_roxellana
ENSACLG00000014771	sf3b2	97	69.309	ENSSBOG00000026337	SF3B2	97	67.857	Saimiri_boliviensis_boliviensis
ENSACLG00000014771	sf3b2	96	57.845	ENSSHAG00000018043	-	88	62.169	Sarcophilus_harrisii
ENSACLG00000014771	sf3b2	87	70.619	ENSSHAG00000010933	-	97	63.265	Sarcophilus_harrisii
ENSACLG00000014771	sf3b2	100	75.610	ENSSFOG00015021125	sf3b2	100	74.503	Scleropages_formosus
ENSACLG00000014771	sf3b2	100	88.295	ENSSMAG00000004079	sf3b2	100	86.030	Scophthalmus_maximus
ENSACLG00000014771	sf3b2	59	90.996	ENSSDUG00000008499	sf3b2	100	82.766	Seriola_dumerili
ENSACLG00000014771	sf3b2	100	87.923	ENSSLDG00000006838	sf3b2	100	89.278	Seriola_lalandi_dorsalis
ENSACLG00000014771	sf3b2	97	66.135	ENSSPUG00000009198	SF3B2	84	73.907	Sphenodon_punctatus
ENSACLG00000014771	sf3b2	100	87.906	ENSSPAG00000004406	sf3b2	100	88.578	Stegastes_partitus
ENSACLG00000014771	sf3b2	87	75.591	ENSSSCG00000012957	SF3B2	85	73.773	Sus_scrofa
ENSACLG00000014771	sf3b2	91	80.645	ENSTRUG00000007611	sf3b2	99	80.645	Takifugu_rubripes
ENSACLG00000014771	sf3b2	97	79.318	ENSTNIG00000007441	sf3b2	100	79.788	Tetraodon_nigroviridis
ENSACLG00000014771	sf3b2	86	67.313	ENSTBEG00000004258	SF3B2	84	66.759	Tupaia_belangeri
ENSACLG00000014771	sf3b2	87	75.131	ENSTTRG00000014339	SF3B2	85	73.964	Tursiops_truncatus
ENSACLG00000014771	sf3b2	85	74.359	ENSUAMG00000020754	SF3B2	96	61.863	Ursus_americanus
ENSACLG00000014771	sf3b2	87	74.869	ENSUMAG00000010994	SF3B2	85	73.705	Ursus_maritimus
ENSACLG00000014771	sf3b2	60	85.000	ENSVPAG00000008695	SF3B2	64	85.000	Vicugna_pacos
ENSACLG00000014771	sf3b2	87	74.738	ENSVVUG00000027029	SF3B2	85	73.575	Vulpes_vulpes
ENSACLG00000014771	sf3b2	91	66.285	ENSXETG00000008422	sf3b2	94	68.200	Xenopus_tropicalis
ENSACLG00000014771	sf3b2	88	76.975	ENSXCOG00000008943	sf3b2	93	76.070	Xiphophorus_couchianus
ENSACLG00000014771	sf3b2	100	83.618	ENSXMAG00000008467	sf3b2	100	83.504	Xiphophorus_maculatus