EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000015353 (Gene tree)
Gene ID: 113018170
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 831 bases
Position: chr3:6910872-6911702
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000022618	zf-CCCH	PF00642.24	6.4e-30	1	4
ENSACLP00000022618	zf-CCCH	PF00642.24	6.4e-30	2	4
ENSACLP00000022618	zf-CCCH	PF00642.24	6.4e-30	3	4
ENSACLP00000022618	zf-CCCH	PF00642.24	6.4e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000023150	-	831	-	ENSACLP00000022618	277 (aa)	-	-

Gene Model

Click here to download ENSACLG00000015353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000015353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000015353	cth1	95	66.176	ENSAPOG00000012552	cth1	95	66.300	Acanthochromis_polyacanthus
ENSACLG00000015353	cth1	84	73.577	ENSACIG00000016026	cth1	90	72.792	Amphilophus_citrinellus
ENSACLG00000015353	cth1	95	66.308	ENSAOCG00000001644	cth1	90	65.591	Amphiprion_ocellaris
ENSACLG00000015353	cth1	95	66.308	ENSAPEG00000008930	cth1	90	65.591	Amphiprion_percula
ENSACLG00000015353	cth1	95	62.542	ENSATEG00000002281	cth1	88	62.799	Anabas_testudineus
ENSACLG00000015353	cth1	100	55.519	ENSAMXG00000025717	cth1	67	63.594	Astyanax_mexicanus
ENSACLG00000015353	cth1	95	61.592	ENSCSEG00000014617	cth1	90	60.900	Cynoglossus_semilaevis
ENSACLG00000015353	cth1	95	55.235	ENSCVAG00000001680	cth1	58	56.250	Cyprinodon_variegatus
ENSACLG00000015353	cth1	95	58.621	ENSDARG00000057328	cth1	67	66.820	Danio_rerio
ENSACLG00000015353	cth1	89	59.643	ENSELUG00000012738	cth1	60	65.517	Esox_lucius
ENSACLG00000015353	cth1	94	57.143	ENSFHEG00000022665	cth1	89	57.401	Fundulus_heteroclitus
ENSACLG00000015353	cth1	95	59.857	ENSGMOG00000007360	cth1	88	58.484	Gadus_morhua
ENSACLG00000015353	cth1	100	55.556	ENSGAFG00000019288	cth1	90	54.704	Gambusia_affinis
ENSACLG00000015353	cth1	100	62.500	ENSGACG00000000802	cth1	89	61.765	Gasterosteus_aculeatus
ENSACLG00000015353	cth1	100	98.917	ENSHBUG00000014400	cth1	94	98.917	Haplochromis_burtoni
ENSACLG00000015353	cth1	95	52.632	ENSHCOG00000010276	cth1	88	51.880	Hippocampus_comes
ENSACLG00000015353	cth1	100	57.516	ENSIPUG00000018040	cth1	66	66.055	Ictalurus_punctatus
ENSACLG00000015353	cth1	95	60.000	ENSKMAG00000005944	cth1	89	60.000	Kryptolebias_marmoratus
ENSACLG00000015353	cth1	95	63.668	ENSLBEG00000019253	cth1	90	63.194	Labrus_bergylta
ENSACLG00000015353	cth1	83	51.208	ENSLOCG00000002047	cth1	97	51.691	Lepisosteus_oculatus
ENSACLG00000015353	cth1	84	60.000	ENSMAMG00000001525	cth1	65	60.000	Mastacembelus_armatus
ENSACLG00000015353	cth1	100	99.639	ENSMZEG00005022335	cth1	94	99.639	Maylandia_zebra
ENSACLG00000015353	cth1	91	63.636	ENSMMOG00000020518	cth1	90	62.409	Mola_mola
ENSACLG00000015353	cth1	75	65.581	ENSMALG00000020738	cth1	57	66.512	Monopterus_albus
ENSACLG00000015353	cth1	89	84.959	ENSNBRG00000022789	cth1	82	84.959	Neolamprologus_brichardi
ENSACLG00000015353	cth1	95	88.848	ENSONIG00000021318	cth1	89	88.848	Oreochromis_niloticus
ENSACLG00000015353	cth1	94	58.271	ENSORLG00000022847	cth1	84	58.730	Oryzias_latipes
ENSACLG00000015353	cth1	94	59.108	ENSORLG00020011979	cth1	84	59.289	Oryzias_latipes_hni
ENSACLG00000015353	cth1	94	58.271	ENSORLG00015013084	cth1	84	58.730	Oryzias_latipes_hsok
ENSACLG00000015353	cth1	91	60.870	ENSOMEG00000005809	cth1	71	60.246	Oryzias_melastigma
ENSACLG00000015353	cth1	99	50.804	ENSPKIG00000015883	cth1	70	56.303	Paramormyrops_kingsleyae
ENSACLG00000015353	cth1	95	59.727	ENSPMGG00000004275	cth1	91	58.362	Periophthalmus_magnuspinnatus
ENSACLG00000015353	cth1	100	55.892	ENSPFOG00000013583	cth1	84	56.940	Poecilia_formosa
ENSACLG00000015353	cth1	100	56.522	ENSPLAG00000018158	cth1	84	57.092	Poecilia_latipinna
ENSACLG00000015353	cth1	100	56.333	ENSPMEG00000005744	cth1	89	57.092	Poecilia_mexicana
ENSACLG00000015353	cth1	100	56.997	ENSPREG00000004099	cth1	90	56.940	Poecilia_reticulata
ENSACLG00000015353	cth1	94	89.655	ENSPNYG00000016705	cth1	91	89.655	Pundamilia_nyererei
ENSACLG00000015353	cth1	88	59.567	ENSPNAG00000013147	cth1	80	57.854	Pygocentrus_nattereri
ENSACLG00000015353	cth1	90	55.556	ENSSFOG00015017190	cth1	62	62.437	Scleropages_formosus
ENSACLG00000015353	cth1	95	59.516	ENSSMAG00000007977	cth1	90	63.668	Scophthalmus_maximus
ENSACLG00000015353	cth1	95	61.873	ENSSDUG00000004321	cth1	90	61.486	Seriola_dumerili
ENSACLG00000015353	cth1	95	62.333	ENSSLDG00000004516	-	90	62.963	Seriola_lalandi_dorsalis
ENSACLG00000015353	cth1	95	62.333	ENSSLDG00000012760	cth1	90	62.963	Seriola_lalandi_dorsalis
ENSACLG00000015353	cth1	95	62.333	ENSSLDG00000010023	-	91	62.963	Seriola_lalandi_dorsalis
ENSACLG00000015353	cth1	95	64.184	ENSSPAG00000018659	cth1	90	62.766	Stegastes_partitus
ENSACLG00000015353	cth1	95	58.333	ENSTRUG00000012770	cth1	90	60.764	Takifugu_rubripes
ENSACLG00000015353	cth1	95	59.375	ENSTNIG00000000740	cth1	90	58.333	Tetraodon_nigroviridis
ENSACLG00000015353	cth1	87	59.917	ENSXCOG00000003710	cth1	82	57.642	Xiphophorus_couchianus
ENSACLG00000015353	cth1	100	56.271	ENSXMAG00000023885	cth1	90	54.448	Xiphophorus_maculatus