EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000015990 (Gene tree)
Gene ID: 113008436
Gene Symbol: SMARCAL1
Alias: im:7145331|si:ch211-239d11.1
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a like 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 11165 bases
Position: chr16:21677071-21688235
Accession: 113008436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000023564	ResIII	PF04851.15	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000024130	SMARCAL1-201	2700	-	ENSACLP00000023564	899 (aa)	XP_026001624	UPI0003296F5C

Gene Model

Click here to download ENSACLG00000015990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000015990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000015990	SMARCAL1	97	51.217	ENSG00000138375	SMARCAL1	99	67.702	Homo_sapiens
ENSACLG00000015990	SMARCAL1	99	82.503	ENSAPOG00000020156	SMARCAL1	99	82.503	Acanthochromis_polyacanthus
ENSACLG00000015990	SMARCAL1	93	93.372	ENSACIG00000001500	smarcal1	96	93.704	Amphilophus_citrinellus
ENSACLG00000015990	SMARCAL1	99	82.373	ENSAOCG00000014266	SMARCAL1	100	82.262	Amphiprion_ocellaris
ENSACLG00000015990	SMARCAL1	99	82.281	ENSAPEG00000015861	SMARCAL1	98	88.136	Amphiprion_percula
ENSACLG00000015990	SMARCAL1	99	79.231	ENSATEG00000020624	SMARCAL1	99	79.121	Anabas_testudineus
ENSACLG00000015990	SMARCAL1	79	63.534	ENSAPLG00000009864	SMARCAL1	75	63.251	Anas_platyrhynchos
ENSACLG00000015990	SMARCAL1	78	65.483	ENSACAG00000004612	SMARCAL1	71	65.483	Anolis_carolinensis
ENSACLG00000015990	SMARCAL1	99	66.556	ENSAMXG00000003350	smarcal1	99	66.118	Astyanax_mexicanus
ENSACLG00000015990	SMARCAL1	94	65.615	ENSCPBG00000013599	SMARCAL1	70	66.667	Chrysemys_picta_bellii
ENSACLG00000015990	SMARCAL1	71	48.125	ENSCING00000009308	-	100	48.125	Ciona_intestinalis
ENSACLG00000015990	SMARCAL1	98	72.768	ENSCSEG00000010785	SMARCAL1	99	72.768	Cynoglossus_semilaevis
ENSACLG00000015990	SMARCAL1	98	75.000	ENSCVAG00000018780	SMARCAL1	97	75.000	Cyprinodon_variegatus
ENSACLG00000015990	SMARCAL1	79	46.483	ENSEBUG00000011906	SMARCAL1	72	55.258	Eptatretus_burgeri
ENSACLG00000015990	SMARCAL1	79	76.017	ENSELUG00000010440	-	69	75.208	Esox_lucius
ENSACLG00000015990	SMARCAL1	80	63.296	ENSFALG00000003981	SMARCAL1	71	64.971	Ficedula_albicollis
ENSACLG00000015990	SMARCAL1	99	74.667	ENSFHEG00000008380	SMARCAL1	99	74.667	Fundulus_heteroclitus
ENSACLG00000015990	SMARCAL1	61	75.177	ENSGMOG00000010034	smarcal1	87	75.177	Gadus_morhua
ENSACLG00000015990	SMARCAL1	80	62.742	ENSGALG00000011475	RPL37A	73	63.380	Gallus_gallus
ENSACLG00000015990	SMARCAL1	88	83.738	ENSGACG00000006073	SMARCAL1	100	85.475	Gasterosteus_aculeatus
ENSACLG00000015990	SMARCAL1	93	55.087	ENSGAGG00000015660	SMARCAL1	71	67.786	Gopherus_agassizii
ENSACLG00000015990	SMARCAL1	100	98.888	ENSHBUG00000002973	smarcal1	100	98.888	Haplochromis_burtoni
ENSACLG00000015990	SMARCAL1	96	71.561	ENSHCOG00000017921	smarcal1	98	71.445	Hippocampus_comes
ENSACLG00000015990	SMARCAL1	97	75.764	ENSKMAG00000012023	SMARCAL1	99	75.538	Kryptolebias_marmoratus
ENSACLG00000015990	SMARCAL1	93	82.361	ENSLBEG00000022915	smarcal1	100	82.249	Labrus_bergylta
ENSACLG00000015990	SMARCAL1	91	78.220	ENSLBEG00000003493	smarcal1	100	78.220	Labrus_bergylta
ENSACLG00000015990	SMARCAL1	99	52.114	ENSLACG00000010974	SMARCAL1	74	61.041	Latimeria_chalumnae
ENSACLG00000015990	SMARCAL1	93	65.845	ENSLOCG00000009637	smarcal1	99	65.728	Lepisosteus_oculatus
ENSACLG00000015990	SMARCAL1	98	79.551	ENSMAMG00000000828	SMARCAL1	99	79.551	Mastacembelus_armatus
ENSACLG00000015990	SMARCAL1	100	99.889	ENSMZEG00005007660	SMARCAL1	100	99.889	Maylandia_zebra
ENSACLG00000015990	SMARCAL1	97	55.531	ENSMGAG00000011658	SMARCAL1	96	55.373	Meleagris_gallopavo
ENSACLG00000015990	SMARCAL1	93	75.326	ENSMMOG00000003842	smarcal1	94	76.330	Mola_mola
ENSACLG00000015990	SMARCAL1	97	51.429	ENSMODG00000015544	SMARCAL1	71	61.974	Monodelphis_domestica
ENSACLG00000015990	SMARCAL1	93	98.703	ENSNBRG00000016273	smarcal1	96	98.975	Neolamprologus_brichardi
ENSACLG00000015990	SMARCAL1	93	51.585	ENSMEUG00000004395	SMARCAL1	74	63.206	Notamacropus_eugenii
ENSACLG00000015990	SMARCAL1	100	97.333	ENSONIG00000009036	smarcal1	100	97.333	Oreochromis_niloticus
ENSACLG00000015990	SMARCAL1	99	72.928	ENSORLG00000016455	SMARCAL1	99	72.235	Oryzias_latipes
ENSACLG00000015990	SMARCAL1	99	72.788	ENSORLG00020001610	SMARCAL1	99	72.013	Oryzias_latipes_hni
ENSACLG00000015990	SMARCAL1	99	72.898	ENSORLG00015001865	SMARCAL1	99	72.235	Oryzias_latipes_hsok
ENSACLG00000015990	SMARCAL1	99	74.860	ENSOMEG00000001845	smarcal1	98	74.413	Oryzias_melastigma
ENSACLG00000015990	SMARCAL1	99	74.273	ENSPMGG00000019092	SMARCAL1	98	74.273	Periophthalmus_magnuspinnatus
ENSACLG00000015990	SMARCAL1	77	61.239	ENSPCIG00000022514	SMARCAL1	73	62.006	Phascolarctos_cinereus
ENSACLG00000015990	SMARCAL1	99	75.526	ENSPFOG00000000560	SMARCAL1	99	76.080	Poecilia_formosa
ENSACLG00000015990	SMARCAL1	99	75.526	ENSPMEG00000018146	SMARCAL1	99	76.080	Poecilia_mexicana
ENSACLG00000015990	SMARCAL1	60	86.111	ENSPREG00000009591	SMARCAL1	97	86.111	Poecilia_reticulata
ENSACLG00000015990	SMARCAL1	97	67.574	ENSPNAG00000014900	smarcal1	91	68.141	Pygocentrus_nattereri
ENSACLG00000015990	SMARCAL1	97	50.054	ENSSHAG00000013538	SMARCAL1	96	51.163	Sarcophilus_harrisii
ENSACLG00000015990	SMARCAL1	99	79.626	ENSSMAG00000010427	SMARCAL1	98	79.341	Scophthalmus_maximus
ENSACLG00000015990	SMARCAL1	98	82.438	ENSSDUG00000017470	SMARCAL1	95	82.735	Seriola_dumerili
ENSACLG00000015990	SMARCAL1	99	81.510	ENSSLDG00000007224	SMARCAL1	99	81.619	Seriola_lalandi_dorsalis
ENSACLG00000015990	SMARCAL1	76	67.442	ENSSPUG00000015369	SMARCAL1	69	67.442	Sphenodon_punctatus
ENSACLG00000015990	SMARCAL1	93	88.714	ENSSPAG00000003742	smarcal1	99	77.844	Stegastes_partitus
ENSACLG00000015990	SMARCAL1	91	52.644	ENSSSCG00000035501	SMARCAL1	76	59.222	Sus_scrofa
ENSACLG00000015990	SMARCAL1	76	63.583	ENSTGUG00000005079	SMARCAL1	99	63.583	Taeniopygia_guttata
ENSACLG00000015990	SMARCAL1	98	64.318	ENSTRUG00000010701	SMARCAL1	99	64.166	Takifugu_rubripes
ENSACLG00000015990	SMARCAL1	97	45.366	ENSTTRG00000009001	SMARCAL1	96	44.813	Tursiops_truncatus
ENSACLG00000015990	SMARCAL1	97	57.746	ENSXETG00000000465	smarcal1	74	69.198	Xenopus_tropicalis