EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000016132 (Gene tree)
Gene ID: 113014126
Gene Symbol: tdp2b (1 of many)
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 2814 bases
Position: chr22:16120664-16123477
Accession: 113014126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000023704	Exo_endo_phos	PF03372.23	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000024273	-	1784	-	ENSACLP00000023704	296 (aa)	XP_026011224	UPI000E42AE73

Gene Model

Click here to download ENSACLG00000016132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000016132's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000016132	tdp2b	90	81.648	ENSACLG00000016148	tdp2b	95	81.648
ENSACLG00000016132	tdp2b	100	96.959	ENSACLG00000016174	tdp2b	100	96.959

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000016132	tdp2b	95	48.582	ENSG00000111802	TDP2	92	48.582	Homo_sapiens
ENSACLG00000016132	tdp2b	87	64.479	ENSAPOG00000018379	-	91	64.479	Acanthochromis_polyacanthus
ENSACLG00000016132	tdp2b	93	48.188	ENSAMEG00000010230	TDP2	98	48.188	Ailuropoda_melanoleuca
ENSACLG00000016132	tdp2b	66	56.853	ENSAOCG00000010081	-	86	56.853	Amphiprion_ocellaris
ENSACLG00000016132	tdp2b	88	62.595	ENSAPEG00000004208	-	94	62.595	Amphiprion_percula
ENSACLG00000016132	tdp2b	99	57.770	ENSATEG00000010663	-	96	57.770	Anabas_testudineus
ENSACLG00000016132	tdp2b	95	49.653	ENSACAG00000002332	TDP2	78	49.653	Anolis_carolinensis
ENSACLG00000016132	tdp2b	94	48.571	ENSANAG00000020033	TDP2	77	48.571	Aotus_nancymaae
ENSACLG00000016132	tdp2b	96	59.859	ENSAMXG00000011775	tdp2b	74	59.859	Astyanax_mexicanus
ENSACLG00000016132	tdp2b	91	49.817	ENSAMXG00000036549	tdp2a	87	49.817	Astyanax_mexicanus
ENSACLG00000016132	tdp2b	99	46.102	ENSBTAG00000000365	TDP2	80	46.102	Bos_taurus
ENSACLG00000016132	tdp2b	84	30.739	WBGene00013405	tdpt-1	74	30.605	Caenorhabditis_elegans
ENSACLG00000016132	tdp2b	98	47.782	ENSCJAG00000021963	-	80	47.782	Callithrix_jacchus
ENSACLG00000016132	tdp2b	94	49.462	ENSCJAG00000006074	TDP2	91	49.462	Callithrix_jacchus
ENSACLG00000016132	tdp2b	93	48.188	ENSCAFG00000010428	TDP2	94	48.188	Canis_familiaris
ENSACLG00000016132	tdp2b	93	48.188	ENSCAFG00020009994	TDP2	94	48.188	Canis_lupus_dingo
ENSACLG00000016132	tdp2b	91	48.529	ENSCHIG00000015294	-	91	48.529	Capra_hircus
ENSACLG00000016132	tdp2b	99	46.758	ENSTSYG00000037199	TDP2	94	46.758	Carlito_syrichta
ENSACLG00000016132	tdp2b	96	48.070	ENSCPOG00000006390	TDP2	79	48.070	Cavia_porcellus
ENSACLG00000016132	tdp2b	94	48.571	ENSCCAG00000022734	TDP2	91	48.387	Cebus_capucinus
ENSACLG00000016132	tdp2b	95	48.227	ENSCATG00000022076	TDP2	90	48.913	Cercocebus_atys
ENSACLG00000016132	tdp2b	97	47.917	ENSCLAG00000002072	TDP2	80	47.917	Chinchilla_lanigera
ENSACLG00000016132	tdp2b	95	48.227	ENSCSAG00000007769	TDP2	78	48.227	Chlorocebus_sabaeus
ENSACLG00000016132	tdp2b	93	50.362	ENSCPBG00000006551	TDP2	70	50.362	Chrysemys_picta_bellii
ENSACLG00000016132	tdp2b	95	47.872	ENSCANG00000040122	TDP2	92	47.687	Colobus_angolensis_palliatus
ENSACLG00000016132	tdp2b	86	51.172	ENSCGRG00001000384	Tdp2	68	51.172	Cricetulus_griseus_chok1gshd
ENSACLG00000016132	tdp2b	86	50.973	ENSCGRG00000010250	Tdp2	72	51.172	Cricetulus_griseus_crigri
ENSACLG00000016132	tdp2b	95	69.504	ENSCVAG00000003114	tdp2b	81	67.450	Cyprinodon_variegatus
ENSACLG00000016132	tdp2b	83	50.607	ENSDARG00000069941	tdp2a	55	50.607	Danio_rerio
ENSACLG00000016132	tdp2b	94	61.268	ENSDARG00000035954	tdp2b	74	61.268	Danio_rerio
ENSACLG00000016132	tdp2b	94	48.929	ENSDNOG00000044082	TDP2	76	48.929	Dasypus_novemcinctus
ENSACLG00000016132	tdp2b	93	49.275	ENSETEG00000019096	TDP2	99	49.275	Echinops_telfairi
ENSACLG00000016132	tdp2b	87	44.015	ENSEBUG00000006535	tdp2a	60	44.015	Eptatretus_burgeri
ENSACLG00000016132	tdp2b	99	46.599	ENSEASG00005007656	TDP2	80	46.599	Equus_asinus_asinus
ENSACLG00000016132	tdp2b	99	46.599	ENSECAG00000014264	TDP2	80	46.599	Equus_caballus
ENSACLG00000016132	tdp2b	92	46.316	ENSEEUG00000010776	TDP2	79	46.316	Erinaceus_europaeus
ENSACLG00000016132	tdp2b	92	63.971	ENSELUG00000016449	tdp2b	71	63.971	Esox_lucius
ENSACLG00000016132	tdp2b	98	47.000	ENSELUG00000009321	tdp2a	83	47.778	Esox_lucius
ENSACLG00000016132	tdp2b	99	46.939	ENSFCAG00000025612	TDP2	80	46.939	Felis_catus
ENSACLG00000016132	tdp2b	93	51.812	ENSFALG00000004710	TDP2	76	51.812	Ficedula_albicollis
ENSACLG00000016132	tdp2b	93	49.638	ENSFDAG00000006512	TDP2	94	49.638	Fukomys_damarensis
ENSACLG00000016132	tdp2b	94	56.786	ENSFHEG00000013560	-	96	56.786	Fundulus_heteroclitus
ENSACLG00000016132	tdp2b	93	50.725	ENSGALG00000013637	TDP2	78	48.464	Gallus_gallus
ENSACLG00000016132	tdp2b	93	50.000	ENSGAGG00000002853	TDP2	70	50.000	Gopherus_agassizii
ENSACLG00000016132	tdp2b	95	48.410	ENSGGOG00000014237	TDP2	92	48.399	Gorilla_gorilla
ENSACLG00000016132	tdp2b	96	79.239	ENSHBUG00000002714	tdp2b	80	79.239	Haplochromis_burtoni
ENSACLG00000016132	tdp2b	72	81.690	ENSHBUG00000005421	-	100	75.732	Haplochromis_burtoni
ENSACLG00000016132	tdp2b	94	49.286	ENSHGLG00000008655	TDP2	77	49.286	Heterocephalus_glaber_female
ENSACLG00000016132	tdp2b	94	49.286	ENSHGLG00100019087	TDP2	77	49.286	Heterocephalus_glaber_male
ENSACLG00000016132	tdp2b	96	58.596	ENSIPUG00000013691	tdp2b	74	58.596	Ictalurus_punctatus
ENSACLG00000016132	tdp2b	82	50.612	ENSJJAG00000021685	Tdp2	70	50.612	Jaculus_jaculus
ENSACLG00000016132	tdp2b	94	57.857	ENSKMAG00000015485	-	90	57.857	Kryptolebias_marmoratus
ENSACLG00000016132	tdp2b	99	48.123	ENSLACG00000008852	TDP2	79	48.123	Latimeria_chalumnae
ENSACLG00000016132	tdp2b	94	53.047	ENSLOCG00000005817	tdp2b	99	53.047	Lepisosteus_oculatus
ENSACLG00000016132	tdp2b	99	49.320	ENSLAFG00000002567	TDP2	82	49.320	Loxodonta_africana
ENSACLG00000016132	tdp2b	95	48.227	ENSMFAG00000045296	TDP2	92	48.043	Macaca_fascicularis
ENSACLG00000016132	tdp2b	95	48.227	ENSMMUG00000009803	TDP2	78	48.227	Macaca_mulatta
ENSACLG00000016132	tdp2b	95	48.227	ENSMNEG00000038003	TDP2	92	48.043	Macaca_nemestrina
ENSACLG00000016132	tdp2b	95	48.227	ENSMLEG00000028883	TDP2	92	48.043	Mandrillus_leucophaeus
ENSACLG00000016132	tdp2b	98	67.586	ENSMAMG00000013654	tdp2b	78	67.586	Mastacembelus_armatus
ENSACLG00000016132	tdp2b	93	79.348	ENSMZEG00005004153	tdp2b	98	79.348	Maylandia_zebra
ENSACLG00000016132	tdp2b	85	97.233	ENSMZEG00005004055	tdp2b	84	97.233	Maylandia_zebra
ENSACLG00000016132	tdp2b	86	94.922	ENSMZEG00005003980	-	83	94.922	Maylandia_zebra
ENSACLG00000016132	tdp2b	100	96.284	ENSMZEG00005004126	tdp2b	100	96.284	Maylandia_zebra
ENSACLG00000016132	tdp2b	96	79.931	ENSMZEG00005003950	tdp2b	80	79.931	Maylandia_zebra
ENSACLG00000016132	tdp2b	94	77.551	ENSMZEG00005004077	tdp2b	100	77.551	Maylandia_zebra
ENSACLG00000016132	tdp2b	90	91.386	ENSMZEG00005004103	tdp2b	90	91.386	Maylandia_zebra
ENSACLG00000016132	tdp2b	96	50.175	ENSMGAG00000008014	TDP2	76	50.175	Meleagris_gallopavo
ENSACLG00000016132	tdp2b	98	47.260	ENSMAUG00000014451	Tdp2	75	47.260	Mesocricetus_auratus
ENSACLG00000016132	tdp2b	98	47.440	ENSMICG00000000039	TDP2	93	48.551	Microcebus_murinus
ENSACLG00000016132	tdp2b	94	48.921	ENSMOCG00000002823	Tdp2	74	48.921	Microtus_ochrogaster
ENSACLG00000016132	tdp2b	74	53.425	ENSMODG00000011653	TDP2	66	53.704	Monodelphis_domestica
ENSACLG00000016132	tdp2b	84	62.249	ENSMALG00000005368	-	84	62.249	Monopterus_albus
ENSACLG00000016132	tdp2b	94	50.360	MGP_CAROLIEiJ_G0018354	Tdp2	67	54.150	Mus_caroli
ENSACLG00000016132	tdp2b	98	49.315	ENSMUSG00000035958	Tdp2	75	49.315	Mus_musculus
ENSACLG00000016132	tdp2b	98	47.945	MGP_PahariEiJ_G0019417	Tdp2	75	47.945	Mus_pahari
ENSACLG00000016132	tdp2b	98	49.658	MGP_SPRETEiJ_G0019220	Tdp2	74	49.658	Mus_spretus
ENSACLG00000016132	tdp2b	93	48.551	ENSMPUG00000004516	TDP2	76	48.551	Mustela_putorius_furo
ENSACLG00000016132	tdp2b	91	49.265	ENSMLUG00000013506	TDP2	78	48.410	Myotis_lucifugus
ENSACLG00000016132	tdp2b	83	50.607	ENSNGAG00000001375	Tdp2	66	50.607	Nannospalax_galili
ENSACLG00000016132	tdp2b	95	48.582	ENSNLEG00000002447	TDP2	89	48.399	Nomascus_leucogenys
ENSACLG00000016132	tdp2b	98	47.766	ENSOPRG00000016299	TDP2	83	47.766	Ochotona_princeps
ENSACLG00000016132	tdp2b	93	48.551	ENSODEG00000014018	TDP2	93	48.551	Octodon_degus
ENSACLG00000016132	tdp2b	95	46.809	ENSOCUG00000013773	TDP2	78	46.809	Oryctolagus_cuniculus
ENSACLG00000016132	tdp2b	91	57.407	ENSORLG00000001661	-	99	57.407	Oryzias_latipes
ENSACLG00000016132	tdp2b	91	57.407	ENSORLG00020004634	-	99	57.407	Oryzias_latipes_hni
ENSACLG00000016132	tdp2b	90	49.064	ENSORLG00015008190	-	97	49.064	Oryzias_latipes_hsok
ENSACLG00000016132	tdp2b	92	55.678	ENSOMEG00000015899	-	93	57.540	Oryzias_melastigma
ENSACLG00000016132	tdp2b	95	47.872	ENSOGAG00000025303	TDP2	76	47.872	Otolemur_garnettii
ENSACLG00000016132	tdp2b	95	48.227	ENSPPAG00000029023	TDP2	92	48.043	Pan_paniscus
ENSACLG00000016132	tdp2b	99	46.259	ENSPPRG00000015398	TDP2	80	46.259	Panthera_pardus
ENSACLG00000016132	tdp2b	93	47.464	ENSPTIG00000018574	TDP2	94	47.464	Panthera_tigris_altaica
ENSACLG00000016132	tdp2b	95	48.227	ENSPTRG00000017778	TDP2	92	48.043	Pan_troglodytes
ENSACLG00000016132	tdp2b	95	48.582	ENSPANG00000017590	TDP2	90	49.275	Papio_anubis
ENSACLG00000016132	tdp2b	94	63.571	ENSPKIG00000006483	tdp2b	76	63.571	Paramormyrops_kingsleyae
ENSACLG00000016132	tdp2b	93	50.725	ENSPSIG00000004948	TDP2	94	50.725	Pelodiscus_sinensis
ENSACLG00000016132	tdp2b	88	51.724	ENSPEMG00000001788	Tdp2	69	51.724	Peromyscus_maniculatus_bairdii
ENSACLG00000016132	tdp2b	85	42.279	ENSPMAG00000001570	tdp2b	97	42.164	Petromyzon_marinus
ENSACLG00000016132	tdp2b	85	51.779	ENSPCIG00000007316	TDP2	66	51.779	Phascolarctos_cinereus
ENSACLG00000016132	tdp2b	90	54.104	ENSPFOG00000017990	-	96	54.104	Poecilia_formosa
ENSACLG00000016132	tdp2b	89	54.545	ENSPLAG00000019439	-	84	54.545	Poecilia_latipinna
ENSACLG00000016132	tdp2b	90	55.056	ENSPMEG00000010824	-	89	55.056	Poecilia_mexicana
ENSACLG00000016132	tdp2b	95	48.582	ENSPPYG00000016282	TDP2	71	48.582	Pongo_abelii
ENSACLG00000016132	tdp2b	98	47.440	ENSPCOG00000021415	TDP2	96	48.375	Propithecus_coquereli
ENSACLG00000016132	tdp2b	94	73.203	ENSPNYG00000011504	tdp2b	100	73.203	Pundamilia_nyererei
ENSACLG00000016132	tdp2b	62	92.935	ENSPNYG00000001944	-	72	94.220	Pundamilia_nyererei
ENSACLG00000016132	tdp2b	96	76.125	ENSPNYG00000011532	tdp2b	80	76.125	Pundamilia_nyererei
ENSACLG00000016132	tdp2b	84	57.028	ENSPNAG00000022162	tdp2a	63	57.028	Pygocentrus_nattereri
ENSACLG00000016132	tdp2b	99	47.119	ENSRNOG00000018246	Tdp2	77	47.119	Rattus_norvegicus
ENSACLG00000016132	tdp2b	95	47.872	ENSRBIG00000037119	TDP2	92	47.687	Rhinopithecus_bieti
ENSACLG00000016132	tdp2b	95	48.227	ENSRROG00000005025	TDP2	92	48.043	Rhinopithecus_roxellana
ENSACLG00000016132	tdp2b	94	48.571	ENSSBOG00000028734	TDP2	90	48.913	Saimiri_boliviensis_boliviensis
ENSACLG00000016132	tdp2b	85	52.964	ENSSHAG00000002506	TDP2	67	52.964	Sarcophilus_harrisii
ENSACLG00000016132	tdp2b	92	51.575	ENSSFOG00015011322	-	72	51.575	Scleropages_formosus
ENSACLG00000016132	tdp2b	93	46.931	ENSSARG00000013547	TDP2	99	46.931	Sorex_araneus
ENSACLG00000016132	tdp2b	94	45.675	ENSSPUG00000008288	TDP2	78	45.675	Sphenodon_punctatus
ENSACLG00000016132	tdp2b	94	47.500	ENSSSCG00000001092	TDP2	77	47.500	Sus_scrofa
ENSACLG00000016132	tdp2b	86	53.333	ENSTGUG00000009035	TDP2	97	53.333	Taeniopygia_guttata
ENSACLG00000016132	tdp2b	84	60.159	ENSTRUG00000012218	-	87	60.159	Takifugu_rubripes
ENSACLG00000016132	tdp2b	89	72.137	ENSTRUG00000014347	tdp2b	73	72.137	Takifugu_rubripes
ENSACLG00000016132	tdp2b	89	72.624	ENSTNIG00000017792	tdp2b	73	72.624	Tetraodon_nigroviridis
ENSACLG00000016132	tdp2b	87	61.686	ENSTNIG00000010260	TDP2	99	61.686	Tetraodon_nigroviridis
ENSACLG00000016132	tdp2b	99	47.782	ENSTTRG00000016376	TDP2	80	47.782	Tursiops_truncatus
ENSACLG00000016132	tdp2b	93	48.188	ENSUAMG00000025939	TDP2	79	48.188	Ursus_americanus
ENSACLG00000016132	tdp2b	93	48.188	ENSUMAG00000020111	TDP2	91	48.188	Ursus_maritimus
ENSACLG00000016132	tdp2b	98	51.020	ENSXETG00000014826	tdp2	77	51.020	Xenopus_tropicalis
ENSACLG00000016132	tdp2b	95	54.196	ENSXCOG00000010778	-	79	54.196	Xiphophorus_couchianus
ENSACLG00000016132	tdp2b	84	58.167	ENSXMAG00000022252	-	73	58.167	Xiphophorus_maculatus