EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000016148 (Gene tree)
Gene ID: -
Gene Symbol: tdp2b (1 of many)
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2b
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 6441 bases
Position: chr22:16125268-16131708
Accession: ZDB-GENE-050816-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000023744	Exo_endo_phos	PF03372.23	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000024314	-	840	-	ENSACLP00000023744	279 (aa)	-	-

Gene Model

Click here to download ENSACLG00000016148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000016148's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000016148	tdp2b	95	81.887	ENSACLG00000016174	tdp2b	90	81.887
ENSACLG00000016148	tdp2b	95	81.648	ENSACLG00000016132	tdp2b	90	81.648

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000016148	tdp2b	95	53.333	ENSG00000111802	TDP2	88	53.333	Homo_sapiens
ENSACLG00000016148	tdp2b	91	64.591	ENSAPOG00000018379	-	90	64.591	Acanthochromis_polyacanthus
ENSACLG00000016148	tdp2b	95	55.556	ENSAMEG00000010230	TDP2	96	55.556	Ailuropoda_melanoleuca
ENSACLG00000016148	tdp2b	63	61.326	ENSAOCG00000010081	-	79	61.326	Amphiprion_ocellaris
ENSACLG00000016148	tdp2b	93	61.832	ENSAPEG00000004208	-	94	61.832	Amphiprion_percula
ENSACLG00000016148	tdp2b	92	63.846	ENSATEG00000010663	-	84	63.846	Anabas_testudineus
ENSACLG00000016148	tdp2b	94	54.340	ENSACAG00000002332	TDP2	72	54.340	Anolis_carolinensis
ENSACLG00000016148	tdp2b	95	53.704	ENSANAG00000020033	TDP2	74	53.704	Aotus_nancymaae
ENSACLG00000016148	tdp2b	94	50.758	ENSAMXG00000036549	tdp2a	85	50.758	Astyanax_mexicanus
ENSACLG00000016148	tdp2b	94	65.185	ENSAMXG00000011775	tdp2b	71	65.185	Astyanax_mexicanus
ENSACLG00000016148	tdp2b	95	54.044	ENSBTAG00000000365	TDP2	67	56.680	Bos_taurus
ENSACLG00000016148	tdp2b	95	54.444	ENSCJAG00000006074	TDP2	88	54.444	Callithrix_jacchus
ENSACLG00000016148	tdp2b	95	53.731	ENSCJAG00000021963	-	73	53.731	Callithrix_jacchus
ENSACLG00000016148	tdp2b	95	55.926	ENSCAFG00000010428	TDP2	92	55.926	Canis_familiaris
ENSACLG00000016148	tdp2b	95	55.926	ENSCAFG00020009994	TDP2	92	55.926	Canis_lupus_dingo
ENSACLG00000016148	tdp2b	94	53.962	ENSCHIG00000015294	-	89	53.962	Capra_hircus
ENSACLG00000016148	tdp2b	91	54.475	ENSTSYG00000037199	TDP2	86	53.358	Carlito_syrichta
ENSACLG00000016148	tdp2b	95	54.074	ENSCPOG00000006390	TDP2	75	54.074	Cavia_porcellus
ENSACLG00000016148	tdp2b	95	53.704	ENSCCAG00000022734	TDP2	88	53.704	Cebus_capucinus
ENSACLG00000016148	tdp2b	95	53.333	ENSCATG00000022076	TDP2	88	53.333	Cercocebus_atys
ENSACLG00000016148	tdp2b	95	54.074	ENSCLAG00000002072	TDP2	75	54.074	Chinchilla_lanigera
ENSACLG00000016148	tdp2b	95	53.333	ENSCSAG00000007769	TDP2	75	53.333	Chlorocebus_sabaeus
ENSACLG00000016148	tdp2b	90	56.917	ENSCPBG00000006551	TDP2	64	56.917	Chrysemys_picta_bellii
ENSACLG00000016148	tdp2b	95	52.963	ENSCANG00000040122	TDP2	88	52.963	Colobus_angolensis_palliatus
ENSACLG00000016148	tdp2b	91	53.125	ENSCGRG00001000384	Tdp2	68	53.125	Cricetulus_griseus_chok1gshd
ENSACLG00000016148	tdp2b	91	53.125	ENSCGRG00000010250	Tdp2	72	53.125	Cricetulus_griseus_crigri
ENSACLG00000016148	tdp2b	96	70.741	ENSCVAG00000003114	tdp2b	75	70.741	Cyprinodon_variegatus
ENSACLG00000016148	tdp2b	87	52.419	ENSDARG00000069941	tdp2a	55	52.419	Danio_rerio
ENSACLG00000016148	tdp2b	90	67.323	ENSDARG00000035954	tdp2b	66	67.323	Danio_rerio
ENSACLG00000016148	tdp2b	95	53.731	ENSDNOG00000044082	TDP2	72	53.731	Dasypus_novemcinctus
ENSACLG00000016148	tdp2b	95	54.074	ENSETEG00000019096	TDP2	96	54.074	Echinops_telfairi
ENSACLG00000016148	tdp2b	93	46.388	ENSEBUG00000006535	tdp2a	60	46.388	Eptatretus_burgeri
ENSACLG00000016148	tdp2b	95	52.593	ENSEASG00005007656	TDP2	71	54.440	Equus_asinus_asinus
ENSACLG00000016148	tdp2b	95	52.963	ENSECAG00000014264	TDP2	74	52.963	Equus_caballus
ENSACLG00000016148	tdp2b	96	52.222	ENSEEUG00000010776	TDP2	75	52.222	Erinaceus_europaeus
ENSACLG00000016148	tdp2b	93	47.893	ENSELUG00000009321	tdp2a	81	47.893	Esox_lucius
ENSACLG00000016148	tdp2b	95	66.667	ENSELUG00000016449	tdp2b	70	66.667	Esox_lucius
ENSACLG00000016148	tdp2b	95	55.926	ENSFCAG00000025612	TDP2	74	55.926	Felis_catus
ENSACLG00000016148	tdp2b	91	54.475	ENSFALG00000004710	TDP2	71	54.475	Ficedula_albicollis
ENSACLG00000016148	tdp2b	95	54.444	ENSFDAG00000006512	TDP2	92	54.444	Fukomys_damarensis
ENSACLG00000016148	tdp2b	90	60.870	ENSFHEG00000013560	-	87	60.870	Fundulus_heteroclitus
ENSACLG00000016148	tdp2b	93	53.817	ENSGALG00000013637	TDP2	70	53.817	Gallus_gallus
ENSACLG00000016148	tdp2b	90	57.312	ENSGAGG00000002853	TDP2	64	57.312	Gopherus_agassizii
ENSACLG00000016148	tdp2b	95	53.333	ENSGGOG00000014237	TDP2	88	53.333	Gorilla_gorilla
ENSACLG00000016148	tdp2b	95	80.827	ENSHBUG00000002714	tdp2b	74	80.827	Haplochromis_burtoni
ENSACLG00000016148	tdp2b	74	97.596	ENSHBUG00000005421	-	87	97.596	Haplochromis_burtoni
ENSACLG00000016148	tdp2b	94	54.307	ENSHGLG00000008655	TDP2	74	54.307	Heterocephalus_glaber_female
ENSACLG00000016148	tdp2b	94	54.307	ENSHGLG00100019087	TDP2	74	54.307	Heterocephalus_glaber_male
ENSACLG00000016148	tdp2b	97	61.594	ENSIPUG00000013691	tdp2b	73	61.594	Ictalurus_punctatus
ENSACLG00000016148	tdp2b	87	53.469	ENSJJAG00000021685	Tdp2	70	53.469	Jaculus_jaculus
ENSACLG00000016148	tdp2b	92	62.452	ENSKMAG00000015485	-	84	62.452	Kryptolebias_marmoratus
ENSACLG00000016148	tdp2b	90	53.937	ENSLACG00000008852	TDP2	69	53.937	Latimeria_chalumnae
ENSACLG00000016148	tdp2b	95	56.458	ENSLOCG00000005817	tdp2b	96	56.458	Lepisosteus_oculatus
ENSACLG00000016148	tdp2b	93	55.344	ENSLAFG00000002567	TDP2	73	55.344	Loxodonta_africana
ENSACLG00000016148	tdp2b	95	53.333	ENSMFAG00000045296	TDP2	88	53.333	Macaca_fascicularis
ENSACLG00000016148	tdp2b	95	53.333	ENSMMUG00000009803	TDP2	75	53.333	Macaca_mulatta
ENSACLG00000016148	tdp2b	95	53.333	ENSMNEG00000038003	TDP2	88	53.333	Macaca_nemestrina
ENSACLG00000016148	tdp2b	95	53.333	ENSMLEG00000028883	TDP2	88	53.333	Mandrillus_leucophaeus
ENSACLG00000016148	tdp2b	94	72.624	ENSMAMG00000013654	tdp2b	73	72.624	Mastacembelus_armatus
ENSACLG00000016148	tdp2b	81	84.581	ENSMZEG00005003980	-	74	84.581	Maylandia_zebra
ENSACLG00000016148	tdp2b	90	82.072	ENSMZEG00005004055	tdp2b	84	82.072	Maylandia_zebra
ENSACLG00000016148	tdp2b	96	89.513	ENSMZEG00005004153	tdp2b	95	89.513	Maylandia_zebra
ENSACLG00000016148	tdp2b	95	77.736	ENSMZEG00005004103	tdp2b	90	77.736	Maylandia_zebra
ENSACLG00000016148	tdp2b	95	99.242	ENSMZEG00005004077	tdp2b	90	99.242	Maylandia_zebra
ENSACLG00000016148	tdp2b	95	80.075	ENSMZEG00005003950	tdp2b	74	80.075	Maylandia_zebra
ENSACLG00000016148	tdp2b	94	82.824	ENSMZEG00005004126	tdp2b	95	80.072	Maylandia_zebra
ENSACLG00000016148	tdp2b	94	53.731	ENSMGAG00000008014	TDP2	72	53.731	Meleagris_gallopavo
ENSACLG00000016148	tdp2b	91	53.125	ENSMAUG00000014451	Tdp2	68	53.125	Mesocricetus_auratus
ENSACLG00000016148	tdp2b	95	54.444	ENSMICG00000000039	TDP2	91	54.444	Microcebus_murinus
ENSACLG00000016148	tdp2b	88	55.645	ENSMOCG00000002823	Tdp2	66	55.645	Microtus_ochrogaster
ENSACLG00000016148	tdp2b	82	55.128	ENSMODG00000011653	TDP2	71	55.172	Monodelphis_domestica
ENSACLG00000016148	tdp2b	88	65.182	ENSMALG00000005368	-	84	65.182	Monopterus_albus
ENSACLG00000016148	tdp2b	89	56.746	MGP_CAROLIEiJ_G0018354	Tdp2	67	56.746	Mus_caroli
ENSACLG00000016148	tdp2b	87	57.085	ENSMUSG00000035958	Tdp2	66	57.085	Mus_musculus
ENSACLG00000016148	tdp2b	87	55.466	MGP_PahariEiJ_G0019417	Tdp2	66	55.466	Mus_pahari
ENSACLG00000016148	tdp2b	88	56.855	MGP_SPRETEiJ_G0019220	Tdp2	66	56.855	Mus_spretus
ENSACLG00000016148	tdp2b	95	56.296	ENSMPUG00000004516	TDP2	74	56.296	Mustela_putorius_furo
ENSACLG00000016148	tdp2b	95	52.222	ENSMLUG00000013506	TDP2	75	52.222	Myotis_lucifugus
ENSACLG00000016148	tdp2b	87	53.846	ENSNGAG00000001375	Tdp2	66	53.846	Nannospalax_galili
ENSACLG00000016148	tdp2b	95	53.333	ENSNLEG00000002447	TDP2	85	53.333	Nomascus_leucogenys
ENSACLG00000016148	tdp2b	95	54.074	ENSOPRG00000016299	TDP2	77	54.074	Ochotona_princeps
ENSACLG00000016148	tdp2b	95	54.074	ENSODEG00000014018	TDP2	91	54.074	Octodon_degus
ENSACLG00000016148	tdp2b	95	52.963	ENSOCUG00000013773	TDP2	75	52.963	Oryctolagus_cuniculus
ENSACLG00000016148	tdp2b	90	61.569	ENSORLG00000001661	-	93	61.569	Oryzias_latipes
ENSACLG00000016148	tdp2b	94	58.545	ENSORLG00020004634	-	93	61.569	Oryzias_latipes_hni
ENSACLG00000016148	tdp2b	96	51.119	ENSORLG00015008190	-	98	51.119	Oryzias_latipes_hsok
ENSACLG00000016148	tdp2b	95	58.209	ENSOMEG00000015899	-	93	60.000	Oryzias_melastigma
ENSACLG00000016148	tdp2b	90	54.902	ENSOGAG00000025303	TDP2	69	54.902	Otolemur_garnettii
ENSACLG00000016148	tdp2b	95	53.333	ENSPPAG00000029023	TDP2	89	53.333	Pan_paniscus
ENSACLG00000016148	tdp2b	95	54.444	ENSPPRG00000015398	TDP2	74	54.444	Panthera_pardus
ENSACLG00000016148	tdp2b	95	54.815	ENSPTIG00000018574	TDP2	92	54.815	Panthera_tigris_altaica
ENSACLG00000016148	tdp2b	95	53.333	ENSPTRG00000017778	TDP2	88	53.333	Pan_troglodytes
ENSACLG00000016148	tdp2b	91	54.264	ENSPANG00000017590	TDP2	88	53.704	Papio_anubis
ENSACLG00000016148	tdp2b	95	65.441	ENSPKIG00000006483	tdp2b	73	65.441	Paramormyrops_kingsleyae
ENSACLG00000016148	tdp2b	90	56.917	ENSPSIG00000004948	TDP2	87	56.917	Pelodiscus_sinensis
ENSACLG00000016148	tdp2b	92	54.231	ENSPEMG00000001788	Tdp2	68	55.294	Peromyscus_maniculatus_bairdii
ENSACLG00000016148	tdp2b	90	42.910	ENSPMAG00000001570	tdp2b	97	43.284	Petromyzon_marinus
ENSACLG00000016148	tdp2b	90	55.906	ENSPCIG00000007316	TDP2	66	55.906	Phascolarctos_cinereus
ENSACLG00000016148	tdp2b	93	55.725	ENSPFOG00000017990	-	94	55.725	Poecilia_formosa
ENSACLG00000016148	tdp2b	93	55.894	ENSPLAG00000019439	-	83	55.894	Poecilia_latipinna
ENSACLG00000016148	tdp2b	94	54.380	ENSPMEG00000010824	-	92	54.380	Poecilia_mexicana
ENSACLG00000016148	tdp2b	95	52.963	ENSPPYG00000016282	TDP2	68	52.963	Pongo_abelii
ENSACLG00000016148	tdp2b	95	52.963	ENSPCOG00000021415	TDP2	94	52.963	Propithecus_coquereli
ENSACLG00000016148	tdp2b	95	87.594	ENSPNYG00000011532	tdp2b	74	87.594	Pundamilia_nyererei
ENSACLG00000016148	tdp2b	96	82.105	ENSPNYG00000011504	tdp2b	93	82.105	Pundamilia_nyererei
ENSACLG00000016148	tdp2b	64	78.090	ENSPNYG00000001944	-	79	73.158	Pundamilia_nyererei
ENSACLG00000016148	tdp2b	88	56.627	ENSPNAG00000022162	tdp2a	63	56.627	Pygocentrus_nattereri
ENSACLG00000016148	tdp2b	87	55.061	ENSRNOG00000018246	Tdp2	66	55.061	Rattus_norvegicus
ENSACLG00000016148	tdp2b	95	52.963	ENSRBIG00000037119	TDP2	88	52.963	Rhinopithecus_bieti
ENSACLG00000016148	tdp2b	95	53.333	ENSRROG00000005025	TDP2	88	53.333	Rhinopithecus_roxellana
ENSACLG00000016148	tdp2b	95	53.704	ENSSBOG00000028734	TDP2	88	53.704	Saimiri_boliviensis_boliviensis
ENSACLG00000016148	tdp2b	90	56.863	ENSSHAG00000002506	TDP2	67	56.863	Sarcophilus_harrisii
ENSACLG00000016148	tdp2b	92	56.400	ENSSFOG00015011322	-	69	56.627	Scleropages_formosus
ENSACLG00000016148	tdp2b	95	52.222	ENSSARG00000013547	TDP2	96	52.222	Sorex_araneus
ENSACLG00000016148	tdp2b	93	51.894	ENSSPUG00000008288	TDP2	71	51.894	Sphenodon_punctatus
ENSACLG00000016148	tdp2b	95	53.333	ENSSSCG00000001092	TDP2	74	53.333	Sus_scrofa
ENSACLG00000016148	tdp2b	90	54.118	ENSTGUG00000009035	TDP2	97	54.118	Taeniopygia_guttata
ENSACLG00000016148	tdp2b	89	60.241	ENSTRUG00000012218	-	87	60.241	Takifugu_rubripes
ENSACLG00000016148	tdp2b	94	72.243	ENSTRUG00000014347	tdp2b	73	72.243	Takifugu_rubripes
ENSACLG00000016148	tdp2b	94	73.004	ENSTNIG00000017792	tdp2b	73	73.004	Tetraodon_nigroviridis
ENSACLG00000016148	tdp2b	92	61.303	ENSTNIG00000010260	TDP2	99	61.303	Tetraodon_nigroviridis
ENSACLG00000016148	tdp2b	91	56.809	ENSTTRG00000016376	TDP2	74	55.556	Tursiops_truncatus
ENSACLG00000016148	tdp2b	95	55.556	ENSUAMG00000025939	TDP2	77	55.556	Ursus_americanus
ENSACLG00000016148	tdp2b	95	55.556	ENSUMAG00000020111	TDP2	89	55.556	Ursus_maritimus
ENSACLG00000016148	tdp2b	94	54.887	ENSXETG00000014826	tdp2	70	54.887	Xenopus_tropicalis
ENSACLG00000016148	tdp2b	88	58.400	ENSXCOG00000010778	-	69	58.400	Xiphophorus_couchianus
ENSACLG00000016148	tdp2b	88	58.800	ENSXMAG00000022252	-	72	58.800	Xiphophorus_maculatus