EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000016174 (Gene tree)
Gene ID: 113014125
Gene Symbol: tdp2b (1 of many)
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 3602 bases
Position: chr22:16134833-16138434
Accession: 113014125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000023787	Exo_endo_phos	PF03372.23	4.3e-08	1	1
ENSACLP00000023801	Exo_endo_phos	PF03372.23	6.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000024370	-	2182	-	ENSACLP00000023801	296 (aa)	XP_026011223	UPI000E4157AA
ENSACLT00000024359	-	885	-	ENSACLP00000023787	294 (aa)	-	-

Gene Model

Click here to download ENSACLG00000016174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000016174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000016174	tdp2b	90	81.887	ENSACLG00000016148	tdp2b	95	81.887
ENSACLG00000016174	tdp2b	100	96.959	ENSACLG00000016132	tdp2b	100	96.959

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000016174	tdp2b	97	48.822	ENSG00000111802	TDP2	97	48.822	Homo_sapiens
ENSACLG00000016174	tdp2b	87	64.093	ENSAPOG00000018379	-	91	64.093	Acanthochromis_polyacanthus
ENSACLG00000016174	tdp2b	93	47.826	ENSAMEG00000010230	TDP2	98	47.826	Ailuropoda_melanoleuca
ENSACLG00000016174	tdp2b	66	55.838	ENSAOCG00000010081	-	86	55.838	Amphiprion_ocellaris
ENSACLG00000016174	tdp2b	88	62.595	ENSAPEG00000004208	-	94	62.595	Amphiprion_percula
ENSACLG00000016174	tdp2b	99	57.770	ENSATEG00000010663	-	96	57.770	Anabas_testudineus
ENSACLG00000016174	tdp2b	95	50.000	ENSACAG00000002332	TDP2	78	50.000	Anolis_carolinensis
ENSACLG00000016174	tdp2b	99	47.099	ENSANAG00000020033	TDP2	80	47.099	Aotus_nancymaae
ENSACLG00000016174	tdp2b	91	49.817	ENSAMXG00000036549	tdp2a	87	49.817	Astyanax_mexicanus
ENSACLG00000016174	tdp2b	96	60.211	ENSAMXG00000011775	tdp2b	74	60.211	Astyanax_mexicanus
ENSACLG00000016174	tdp2b	99	46.102	ENSBTAG00000000365	TDP2	80	46.102	Bos_taurus
ENSACLG00000016174	tdp2b	84	31.128	WBGene00013405	tdpt-1	74	30.961	Caenorhabditis_elegans
ENSACLG00000016174	tdp2b	98	47.440	ENSCJAG00000021963	-	80	47.440	Callithrix_jacchus
ENSACLG00000016174	tdp2b	94	49.104	ENSCJAG00000006074	TDP2	91	49.104	Callithrix_jacchus
ENSACLG00000016174	tdp2b	99	46.075	ENSCAFG00000010428	TDP2	96	47.917	Canis_familiaris
ENSACLG00000016174	tdp2b	97	47.917	ENSCAFG00020009994	TDP2	96	47.917	Canis_lupus_dingo
ENSACLG00000016174	tdp2b	97	47.586	ENSCHIG00000015294	-	97	47.586	Capra_hircus
ENSACLG00000016174	tdp2b	99	46.758	ENSTSYG00000037199	TDP2	94	46.758	Carlito_syrichta
ENSACLG00000016174	tdp2b	96	47.719	ENSCPOG00000006390	TDP2	79	47.719	Cavia_porcellus
ENSACLG00000016174	tdp2b	99	47.099	ENSCCAG00000022734	TDP2	91	48.029	Cebus_capucinus
ENSACLG00000016174	tdp2b	95	47.872	ENSCATG00000022076	TDP2	90	48.551	Cercocebus_atys
ENSACLG00000016174	tdp2b	97	47.569	ENSCLAG00000002072	TDP2	80	47.569	Chinchilla_lanigera
ENSACLG00000016174	tdp2b	95	47.872	ENSCSAG00000007769	TDP2	78	47.872	Chlorocebus_sabaeus
ENSACLG00000016174	tdp2b	93	50.000	ENSCPBG00000006551	TDP2	70	50.000	Chrysemys_picta_bellii
ENSACLG00000016174	tdp2b	95	47.518	ENSCANG00000040122	TDP2	92	47.331	Colobus_angolensis_palliatus
ENSACLG00000016174	tdp2b	86	51.172	ENSCGRG00001000384	Tdp2	68	51.172	Cricetulus_griseus_chok1gshd
ENSACLG00000016174	tdp2b	86	51.172	ENSCGRG00000010250	Tdp2	72	51.172	Cricetulus_griseus_crigri
ENSACLG00000016174	tdp2b	95	69.149	ENSCVAG00000003114	tdp2b	73	72.624	Cyprinodon_variegatus
ENSACLG00000016174	tdp2b	94	61.972	ENSDARG00000035954	tdp2b	74	61.972	Danio_rerio
ENSACLG00000016174	tdp2b	83	50.607	ENSDARG00000069941	tdp2a	55	50.607	Danio_rerio
ENSACLG00000016174	tdp2b	99	47.440	ENSDNOG00000044082	TDP2	79	47.440	Dasypus_novemcinctus
ENSACLG00000016174	tdp2b	93	49.638	ENSETEG00000019096	TDP2	99	49.638	Echinops_telfairi
ENSACLG00000016174	tdp2b	88	43.893	ENSEBUG00000006535	tdp2a	61	43.893	Eptatretus_burgeri
ENSACLG00000016174	tdp2b	99	47.279	ENSEASG00005007656	TDP2	80	47.279	Equus_asinus_asinus
ENSACLG00000016174	tdp2b	99	47.279	ENSECAG00000014264	TDP2	80	47.279	Equus_caballus
ENSACLG00000016174	tdp2b	92	46.316	ENSEEUG00000010776	TDP2	79	46.316	Erinaceus_europaeus
ENSACLG00000016174	tdp2b	92	49.084	ENSELUG00000009321	tdp2a	95	45.395	Esox_lucius
ENSACLG00000016174	tdp2b	92	64.706	ENSELUG00000016449	tdp2b	71	64.706	Esox_lucius
ENSACLG00000016174	tdp2b	99	46.939	ENSFCAG00000025612	TDP2	80	46.939	Felis_catus
ENSACLG00000016174	tdp2b	93	51.449	ENSFALG00000004710	TDP2	76	51.449	Ficedula_albicollis
ENSACLG00000016174	tdp2b	93	49.275	ENSFDAG00000006512	TDP2	94	49.275	Fukomys_damarensis
ENSACLG00000016174	tdp2b	94	57.500	ENSFHEG00000013560	-	96	57.500	Fundulus_heteroclitus
ENSACLG00000016174	tdp2b	93	50.362	ENSGALG00000013637	TDP2	78	48.123	Gallus_gallus
ENSACLG00000016174	tdp2b	93	50.362	ENSGAGG00000002853	TDP2	70	50.362	Gopherus_agassizii
ENSACLG00000016174	tdp2b	99	47.440	ENSGGOG00000014237	TDP2	97	48.485	Gorilla_gorilla
ENSACLG00000016174	tdp2b	72	80.751	ENSHBUG00000005421	-	100	74.895	Haplochromis_burtoni
ENSACLG00000016174	tdp2b	99	78.114	ENSHBUG00000002714	tdp2b	82	78.114	Haplochromis_burtoni
ENSACLG00000016174	tdp2b	94	48.929	ENSHGLG00000008655	TDP2	77	48.929	Heterocephalus_glaber_female
ENSACLG00000016174	tdp2b	94	48.929	ENSHGLG00100019087	TDP2	77	48.929	Heterocephalus_glaber_male
ENSACLG00000016174	tdp2b	98	58.076	ENSIPUG00000013691	tdp2b	76	58.076	Ictalurus_punctatus
ENSACLG00000016174	tdp2b	82	50.204	ENSJJAG00000021685	Tdp2	70	50.204	Jaculus_jaculus
ENSACLG00000016174	tdp2b	94	58.214	ENSKMAG00000015485	-	90	58.214	Kryptolebias_marmoratus
ENSACLG00000016174	tdp2b	99	48.464	ENSLACG00000008852	TDP2	79	48.464	Latimeria_chalumnae
ENSACLG00000016174	tdp2b	94	53.405	ENSLOCG00000005817	tdp2b	99	53.405	Lepisosteus_oculatus
ENSACLG00000016174	tdp2b	99	48.980	ENSLAFG00000002567	TDP2	82	48.980	Loxodonta_africana
ENSACLG00000016174	tdp2b	97	48.485	ENSMFAG00000045296	TDP2	97	48.485	Macaca_fascicularis
ENSACLG00000016174	tdp2b	95	47.872	ENSMMUG00000009803	TDP2	78	47.872	Macaca_mulatta
ENSACLG00000016174	tdp2b	95	47.872	ENSMNEG00000038003	TDP2	92	47.687	Macaca_nemestrina
ENSACLG00000016174	tdp2b	95	47.872	ENSMLEG00000028883	TDP2	92	47.687	Mandrillus_leucophaeus
ENSACLG00000016174	tdp2b	96	66.783	ENSMAMG00000013654	tdp2b	76	68.459	Mastacembelus_armatus
ENSACLG00000016174	tdp2b	94	90.545	ENSMZEG00005004055	tdp2b	93	90.210	Maylandia_zebra
ENSACLG00000016174	tdp2b	93	79.348	ENSMZEG00005004153	tdp2b	98	79.348	Maylandia_zebra
ENSACLG00000016174	tdp2b	90	82.576	ENSMZEG00005004077	tdp2b	100	77.211	Maylandia_zebra
ENSACLG00000016174	tdp2b	100	91.837	ENSMZEG00005004103	tdp2b	100	91.837	Maylandia_zebra
ENSACLG00000016174	tdp2b	100	97.973	ENSMZEG00005004126	tdp2b	100	97.973	Maylandia_zebra
ENSACLG00000016174	tdp2b	99	76.768	ENSMZEG00005003950	tdp2b	82	76.768	Maylandia_zebra
ENSACLG00000016174	tdp2b	86	93.750	ENSMZEG00005003980	-	83	93.750	Maylandia_zebra
ENSACLG00000016174	tdp2b	96	49.825	ENSMGAG00000008014	TDP2	76	49.825	Meleagris_gallopavo
ENSACLG00000016174	tdp2b	86	50.391	ENSMAUG00000014451	Tdp2	68	50.391	Mesocricetus_auratus
ENSACLG00000016174	tdp2b	99	46.758	ENSMICG00000000039	TDP2	93	48.188	Microcebus_murinus
ENSACLG00000016174	tdp2b	94	48.561	ENSMOCG00000002823	Tdp2	74	48.561	Microtus_ochrogaster
ENSACLG00000016174	tdp2b	75	52.466	ENSMODG00000011653	TDP2	66	53.241	Monodelphis_domestica
ENSACLG00000016174	tdp2b	84	63.158	ENSMALG00000005368	-	84	63.158	Monopterus_albus
ENSACLG00000016174	tdp2b	94	50.000	MGP_CAROLIEiJ_G0018354	Tdp2	67	54.150	Mus_caroli
ENSACLG00000016174	tdp2b	89	52.652	ENSMUSG00000035958	Tdp2	73	49.650	Mus_musculus
ENSACLG00000016174	tdp2b	96	48.252	MGP_PahariEiJ_G0019417	Tdp2	73	48.252	Mus_pahari
ENSACLG00000016174	tdp2b	96	50.000	MGP_SPRETEiJ_G0019220	Tdp2	73	50.000	Mus_spretus
ENSACLG00000016174	tdp2b	93	48.188	ENSMPUG00000004516	TDP2	76	48.188	Mustela_putorius_furo
ENSACLG00000016174	tdp2b	91	48.897	ENSMLUG00000013506	TDP2	78	48.057	Myotis_lucifugus
ENSACLG00000016174	tdp2b	83	50.607	ENSNGAG00000001375	Tdp2	66	50.607	Nannospalax_galili
ENSACLG00000016174	tdp2b	97	48.485	ENSNLEG00000002447	TDP2	94	48.485	Nomascus_leucogenys
ENSACLG00000016174	tdp2b	99	47.440	ENSOPRG00000016299	TDP2	83	47.440	Ochotona_princeps
ENSACLG00000016174	tdp2b	93	48.188	ENSODEG00000014018	TDP2	93	48.188	Octodon_degus
ENSACLG00000016174	tdp2b	95	46.454	ENSOCUG00000013773	TDP2	78	46.454	Oryctolagus_cuniculus
ENSACLG00000016174	tdp2b	91	58.736	ENSORLG00000001661	-	99	58.736	Oryzias_latipes
ENSACLG00000016174	tdp2b	91	58.736	ENSORLG00020004634	-	99	58.736	Oryzias_latipes_hni
ENSACLG00000016174	tdp2b	90	50.566	ENSORLG00015008190	-	97	50.566	Oryzias_latipes_hsok
ENSACLG00000016174	tdp2b	92	56.410	ENSOMEG00000015899	-	93	58.333	Oryzias_melastigma
ENSACLG00000016174	tdp2b	99	46.758	ENSOGAG00000025303	TDP2	79	46.758	Otolemur_garnettii
ENSACLG00000016174	tdp2b	95	47.872	ENSPPAG00000029023	TDP2	92	47.687	Pan_paniscus
ENSACLG00000016174	tdp2b	99	46.259	ENSPPRG00000015398	TDP2	80	46.259	Panthera_pardus
ENSACLG00000016174	tdp2b	93	47.101	ENSPTIG00000018574	TDP2	94	47.101	Panthera_tigris_altaica
ENSACLG00000016174	tdp2b	97	48.148	ENSPTRG00000017778	TDP2	97	48.148	Pan_troglodytes
ENSACLG00000016174	tdp2b	99	47.440	ENSPANG00000017590	TDP2	90	48.913	Papio_anubis
ENSACLG00000016174	tdp2b	94	62.500	ENSPKIG00000006483	tdp2b	76	62.500	Paramormyrops_kingsleyae
ENSACLG00000016174	tdp2b	93	50.725	ENSPSIG00000004948	TDP2	94	50.725	Pelodiscus_sinensis
ENSACLG00000016174	tdp2b	88	51.724	ENSPEMG00000001788	Tdp2	69	51.724	Peromyscus_maniculatus_bairdii
ENSACLG00000016174	tdp2b	85	42.164	ENSPMAG00000001570	tdp2b	97	42.164	Petromyzon_marinus
ENSACLG00000016174	tdp2b	85	51.779	ENSPCIG00000007316	TDP2	66	51.779	Phascolarctos_cinereus
ENSACLG00000016174	tdp2b	90	54.851	ENSPFOG00000017990	-	96	54.851	Poecilia_formosa
ENSACLG00000016174	tdp2b	94	53.047	ENSPLAG00000019439	-	87	53.047	Poecilia_latipinna
ENSACLG00000016174	tdp2b	97	51.689	ENSPMEG00000010824	-	99	51.689	Poecilia_mexicana
ENSACLG00000016174	tdp2b	95	48.227	ENSPPYG00000016282	TDP2	71	48.227	Pongo_abelii
ENSACLG00000016174	tdp2b	99	46.758	ENSPCOG00000021415	TDP2	99	48.763	Propithecus_coquereli
ENSACLG00000016174	tdp2b	94	73.203	ENSPNYG00000011504	tdp2b	100	73.203	Pundamilia_nyererei
ENSACLG00000016174	tdp2b	99	74.411	ENSPNYG00000011532	tdp2b	82	74.411	Pundamilia_nyererei
ENSACLG00000016174	tdp2b	60	95.429	ENSPNYG00000001944	-	82	84.772	Pundamilia_nyererei
ENSACLG00000016174	tdp2b	84	57.028	ENSPNAG00000022162	tdp2a	63	57.028	Pygocentrus_nattereri
ENSACLG00000016174	tdp2b	94	47.143	ENSRNOG00000018246	Tdp2	75	47.143	Rattus_norvegicus
ENSACLG00000016174	tdp2b	99	46.758	ENSRBIG00000037119	TDP2	92	47.331	Rhinopithecus_bieti
ENSACLG00000016174	tdp2b	95	47.872	ENSRROG00000005025	TDP2	92	47.687	Rhinopithecus_roxellana
ENSACLG00000016174	tdp2b	99	47.099	ENSSBOG00000028734	TDP2	90	48.551	Saimiri_boliviensis_boliviensis
ENSACLG00000016174	tdp2b	86	52.549	ENSSHAG00000002506	TDP2	68	52.549	Sarcophilus_harrisii
ENSACLG00000016174	tdp2b	92	51.969	ENSSFOG00015011322	-	72	51.969	Scleropages_formosus
ENSACLG00000016174	tdp2b	93	46.570	ENSSARG00000013547	TDP2	99	46.570	Sorex_araneus
ENSACLG00000016174	tdp2b	94	44.637	ENSSPUG00000008288	TDP2	78	44.637	Sphenodon_punctatus
ENSACLG00000016174	tdp2b	94	47.143	ENSSSCG00000001092	TDP2	77	47.143	Sus_scrofa
ENSACLG00000016174	tdp2b	86	52.941	ENSTGUG00000009035	TDP2	98	52.918	Taeniopygia_guttata
ENSACLG00000016174	tdp2b	84	62.249	ENSTRUG00000012218	-	87	62.249	Takifugu_rubripes
ENSACLG00000016174	tdp2b	89	71.374	ENSTRUG00000014347	tdp2b	73	71.374	Takifugu_rubripes
ENSACLG00000016174	tdp2b	89	72.901	ENSTNIG00000017792	tdp2b	73	72.901	Tetraodon_nigroviridis
ENSACLG00000016174	tdp2b	87	62.069	ENSTNIG00000010260	TDP2	99	62.069	Tetraodon_nigroviridis
ENSACLG00000016174	tdp2b	99	47.099	ENSTTRG00000016376	TDP2	79	48.432	Tursiops_truncatus
ENSACLG00000016174	tdp2b	93	47.826	ENSUAMG00000025939	TDP2	79	47.826	Ursus_americanus
ENSACLG00000016174	tdp2b	93	47.826	ENSUMAG00000020111	TDP2	91	47.826	Ursus_maritimus
ENSACLG00000016174	tdp2b	98	50.340	ENSXETG00000014826	tdp2	77	50.340	Xenopus_tropicalis
ENSACLG00000016174	tdp2b	95	54.895	ENSXCOG00000010778	-	79	54.895	Xiphophorus_couchianus
ENSACLG00000016174	tdp2b	90	55.926	ENSXMAG00000022252	-	77	55.926	Xiphophorus_maculatus