EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000016198 (Gene tree)
Gene ID: 113020141
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 5281 bases
Position: chr4:1092553-1097833
Accession: 113020141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000023796	Btz	PF09405.10	3.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000024367	-	2490	-	ENSACLP00000023796	762 (aa)	XP_026019646	UPI000329CFE7

Gene Model

Click here to download ENSACLG00000016198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000016198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000016198	casc3	80	54.098	ENSG00000108349	CASC3	68	66.234	Homo_sapiens
ENSACLG00000016198	casc3	100	75.450	ENSAPOG00000008467	casc3	100	76.637	Acanthochromis_polyacanthus
ENSACLG00000016198	casc3	85	94.118	ENSACIG00000000720	casc3	82	95.152	Amphilophus_citrinellus
ENSACLG00000016198	casc3	100	76.843	ENSAOCG00000016676	casc3	100	77.778	Amphiprion_ocellaris
ENSACLG00000016198	casc3	100	76.684	ENSAPEG00000006787	casc3	95	76.287	Amphiprion_percula
ENSACLG00000016198	casc3	100	80.897	ENSATEG00000017196	casc3	100	80.513	Anabas_testudineus
ENSACLG00000016198	casc3	52	63.462	ENSANAG00000031954	-	84	65.385	Aotus_nancymaae
ENSACLG00000016198	casc3	77	53.465	ENSANAG00000034820	-	86	53.438	Aotus_nancymaae
ENSACLG00000016198	casc3	81	54.574	ENSBTAG00000006250	CASC3	64	67.532	Bos_taurus
ENSACLG00000016198	casc3	80	54.455	ENSCAFG00020018882	CASC3	81	54.517	Canis_lupus_dingo
ENSACLG00000016198	casc3	60	60.000	ENSCAPG00000010514	CASC3	75	68.182	Cavia_aperea
ENSACLG00000016198	casc3	80	53.618	ENSCPOG00000015139	CASC3	83	55.975	Cavia_porcellus
ENSACLG00000016198	casc3	78	50.464	ENSCPBG00000004750	CASC3	72	66.013	Chrysemys_picta_bellii
ENSACLG00000016198	casc3	100	69.987	ENSCSEG00000010047	casc3	100	69.659	Cynoglossus_semilaevis
ENSACLG00000016198	casc3	100	73.874	ENSCVAG00000014935	casc3	100	74.708	Cyprinodon_variegatus
ENSACLG00000016198	casc3	81	35.647	ENSEBUG00000010654	casc3	76	37.607	Eptatretus_burgeri
ENSACLG00000016198	casc3	80	55.016	ENSEASG00005002909	CASC3	82	55.247	Equus_asinus_asinus
ENSACLG00000016198	casc3	100	57.528	ENSELUG00000015093	casc3	100	56.532	Esox_lucius
ENSACLG00000016198	casc3	91	42.000	ENSFALG00000000412	CASC3	82	53.846	Ficedula_albicollis
ENSACLG00000016198	casc3	100	72.798	ENSFHEG00000015793	casc3	100	72.739	Fundulus_heteroclitus
ENSACLG00000016198	casc3	86	46.914	ENSGALG00000031813	CASC3	82	52.997	Gallus_gallus
ENSACLG00000016198	casc3	98	75.489	ENSGAFG00000017148	casc3	86	75.455	Gambusia_affinis
ENSACLG00000016198	casc3	63	67.333	ENSGAGG00000008432	CASC3	77	69.231	Gopherus_agassizii
ENSACLG00000016198	casc3	100	99.475	ENSHBUG00000013155	casc3	100	99.475	Haplochromis_burtoni
ENSACLG00000016198	casc3	100	64.185	ENSHCOG00000002664	casc3	94	62.842	Hippocampus_comes
ENSACLG00000016198	casc3	77	54.167	ENSJJAG00000023525	Casc3	82	54.259	Jaculus_jaculus
ENSACLG00000016198	casc3	93	75.770	ENSKMAG00000019507	casc3	99	75.000	Kryptolebias_marmoratus
ENSACLG00000016198	casc3	96	74.003	ENSLBEG00000005435	casc3	100	73.300	Labrus_bergylta
ENSACLG00000016198	casc3	80	55.410	ENSMFAG00000041496	CASC3	82	55.901	Macaca_fascicularis
ENSACLG00000016198	casc3	96	75.737	ENSMAMG00000005235	casc3	95	74.866	Mastacembelus_armatus
ENSACLG00000016198	casc3	100	100.000	ENSMZEG00005003815	casc3	100	100.000	Maylandia_zebra
ENSACLG00000016198	casc3	89	41.772	ENSMGAG00000013247	CASC3	82	53.304	Meleagris_gallopavo
ENSACLG00000016198	casc3	100	70.716	ENSMMOG00000014339	casc3	100	70.566	Mola_mola
ENSACLG00000016198	casc3	57	61.783	ENSMODG00000013044	CASC3	65	55.949	Monodelphis_domestica
ENSACLG00000016198	casc3	62	97.000	ENSMALG00000019771	casc3	84	87.805	Monopterus_albus
ENSACLG00000016198	casc3	100	97.258	ENSONIG00000009337	casc3	100	97.258	Oreochromis_niloticus
ENSACLG00000016198	casc3	100	67.137	ENSORLG00000023125	casc3	100	67.834	Oryzias_latipes
ENSACLG00000016198	casc3	80	54.098	ENSPPAG00000035069	CASC3	74	55.205	Pan_paniscus
ENSACLG00000016198	casc3	67	53.158	ENSPANG00000021708	CASC3	66	53.535	Papio_anubis
ENSACLG00000016198	casc3	99	70.481	ENSPFOG00000017632	casc3	96	74.377	Poecilia_formosa
ENSACLG00000016198	casc3	100	75.964	ENSPLAG00000005268	casc3	100	75.000	Poecilia_latipinna
ENSACLG00000016198	casc3	56	78.363	ENSPMEG00000010299	casc3	68	87.407	Poecilia_mexicana
ENSACLG00000016198	casc3	78	76.759	ENSPREG00000011856	casc3	91	75.574	Poecilia_reticulata
ENSACLG00000016198	casc3	80	55.116	ENSPPYG00000008467	CASC3	83	56.698	Pongo_abelii
ENSACLG00000016198	casc3	100	99.606	ENSPNYG00000011962	casc3	100	99.606	Pundamilia_nyererei
ENSACLG00000016198	casc3	66	54.747	ENSRNOG00000009716	Casc3	80	56.051	Rattus_norvegicus
ENSACLG00000016198	casc3	100	69.004	ENSSMAG00000016096	casc3	100	71.197	Scophthalmus_maximus
ENSACLG00000016198	casc3	100	77.308	ENSSDUG00000016893	casc3	95	78.772	Seriola_dumerili
ENSACLG00000016198	casc3	82	78.348	ENSSLDG00000020308	casc3	100	83.286	Seriola_lalandi_dorsalis
ENSACLG00000016198	casc3	100	76.953	ENSSPAG00000023008	casc3	100	76.697	Stegastes_partitus
ENSACLG00000016198	casc3	72	54.098	ENSSSCG00000017477	CASC3	71	68.212	Sus_scrofa
ENSACLG00000016198	casc3	96	69.906	ENSTRUG00000000673	casc3	95	67.896	Takifugu_rubripes
ENSACLG00000016198	casc3	100	63.212	ENSTNIG00000003208	casc3	94	70.241	Tetraodon_nigroviridis
ENSACLG00000016198	casc3	78	54.369	ENSUAMG00000015116	CASC3	81	54.517	Ursus_americanus
ENSACLG00000016198	casc3	60	58.289	ENSUMAG00000017697	CASC3	85	67.133	Ursus_maritimus
ENSACLG00000016198	casc3	100	76.667	ENSXMAG00000013937	casc3	100	76.667	Xiphophorus_maculatus