EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACLG00000016311 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Astatotilapia_calliptera
Status
putative
Strand
Minus strand
Length
3992 bases
Position
chr18:316472-320463
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACLP00000024006RRM_1PF00076.222.7e-1911
ENSACLP00000023978RRM_1PF00076.222.8e-1911
ENSACLP00000024094RRM_1PF00076.224.8e-1611
ENSACLP00000024055RRM_1PF00076.221.3e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACLT00000024580-432-ENSACLP00000024006143 (aa)--
ENSACLT00000024552-441-ENSACLP00000023978146 (aa)--
ENSACLT00000024629-336-ENSACLP00000024055111 (aa)--
ENSACLT00000024669-576-ENSACLP00000024094191 (aa)--
Gene Model
Click here to download ENSACLG00000016311's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000016311's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACLG00000016311-6332.609ENSACLG00000010873-5331.461
ENSACLG00000016311-5832.941ENSACLG00000022561srsf3b5132.941
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACLG00000016311-6296.053ENSG00000179950PUF605897.015Homo_sapiens
ENSACLG00000016311-6864.000ENSCING00000002156-5063.793Ciona_intestinalis
ENSACLG00000016311-6297.333ENSDARG00000001241puf60b6496.053Danio_rerio
ENSACLG00000016311-6296.000ENSDARG00000032175puf60a5596.000Danio_rerio
ENSACLG00000016311-6496.000ENSNBRG00000013047puf60b5372.414Neolamprologus_brichardi
ENSACLG00000016311-5386.842ENSPMAG00000009884puf60b7588.000Petromyzon_marinus
ENSACLG00000016311-5396.053ENSTGUG00000016423-7897.333Taeniopygia_guttata
ENSACLG00000016311-6196.053ENSTBEG00000002751-5997.333Tupaia_belangeri

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us