EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACLG00000016374 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Astatotilapia_calliptera
Status
putative
Strand
Minus strand
Length
14323 bases
Position
chr9:11042685-11057007
Accession
ZDB-GENE-040426-2401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACLP00000024190RRM_1PF00076.225.2e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACLT00000024867-651-ENSACLP00000024288216 (aa)--
ENSACLT00000024768-855-ENSACLP00000024190284 (aa)--
Gene Model
Click here to download ENSACLG00000016374's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000016374's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACLG00000016374pabpn17051.208ENSACLG00000025147PABPN1L7451.208
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACLG00000016374pabpn17670.996ENSG00000258643BCL2L2-PABPN15483.425Homo_sapiens
ENSACLG00000016374pabpn16680.905ENSG00000100836PABPN19082.353Homo_sapiens
ENSACLG00000016374pabpn110096.864ENSAPOG00000016425pabpn110096.864Acanthochromis_polyacanthus
ENSACLG00000016374pabpn16183.425ENSAMEG00000007048BCL2L2-PABPN19583.425Ailuropoda_melanoleuca
ENSACLG00000016374pabpn110099.648ENSACIG00000021744pabpn110099.648Amphilophus_citrinellus
ENSACLG00000016374pabpn17796.396ENSAOCG00000015805pabpn19496.396Amphiprion_ocellaris
ENSACLG00000016374pabpn17796.396ENSAPEG00000009623pabpn19496.396Amphiprion_percula
ENSACLG00000016374pabpn17796.847ENSATEG00000020531pabpn19496.847Anabas_testudineus
ENSACLG00000016374pabpn15985.057ENSACAG00000006185-7672.124Anolis_carolinensis
ENSACLG00000016374pabpn16482.199ENSANAG00000024513-8271.901Aotus_nancymaae
ENSACLG00000016374pabpn110085.417ENSAMXG00000000452pabpn19495.964Astyanax_mexicanus
ENSACLG00000016374pabpn16383.243ENSBTAG00000006884PABPN18468.254Bos_taurus
ENSACLG00000016374pabpn16182.486ENSBTAG00000050594-7678.109Bos_taurus
ENSACLG00000016374pabpn16281.522ENSBTAG00000053753-6682.584Bos_taurus
ENSACLG00000016374pabpn17674.336ENSCJAG00000007960-7875.455Callithrix_jacchus
ENSACLG00000016374pabpn15379.245ENSCJAG00000004407-7979.245Callithrix_jacchus
ENSACLG00000016374pabpn16581.865ENSCAFG00000011482PABPN18170.120Canis_familiaris
ENSACLG00000016374pabpn16680.905ENSCAFG00020007298-8467.045Canis_lupus_dingo
ENSACLG00000016374pabpn16680.905ENSCAFG00020006651-8467.045Canis_lupus_dingo
ENSACLG00000016374pabpn16680.905ENSCHIG00000012184PABPN18467.045Capra_hircus
ENSACLG00000016374pabpn17670.996ENSTSYG00000033996BCL2L2-PABPN18981.132Carlito_syrichta
ENSACLG00000016374pabpn16680.402ENSCPOG00000025574PABPN16777.033Cavia_porcellus
ENSACLG00000016374pabpn17674.336ENSCCAG00000033954BCL2L2-PABPN17875.455Cebus_capucinus
ENSACLG00000016374pabpn17674.336ENSCATG00000038536BCL2L2-PABPN17875.455Cercocebus_atys
ENSACLG00000016374pabpn16957.895ENSCLAG00000012423PABPN15576.667Chinchilla_lanigera
ENSACLG00000016374pabpn16679.397ENSCSAG00000016036PABPN18465.660Chlorocebus_sabaeus
ENSACLG00000016374pabpn16671.939ENSCHOG00000004798BCL2L2-PABPN18669.565Choloepus_hoffmanni
ENSACLG00000016374pabpn15383.019ENSCPBG00000026060-8983.019Chrysemys_picta_bellii
ENSACLG00000016374pabpn15765.854ENSCING00000012468-8064.444Ciona_intestinalis
ENSACLG00000016374pabpn16471.809ENSCANG00000030980-8363.478Colobus_angolensis_palliatus
ENSACLG00000016374pabpn17670.996ENSCANG00000009750BCL2L2-PABPN18981.132Colobus_angolensis_palliatus
ENSACLG00000016374pabpn16680.402ENSCGRG00001019696Pabpn18980.503Cricetulus_griseus_chok1gshd
ENSACLG00000016374pabpn15288.742ENSCGRG00000011102Pabpn19388.742Cricetulus_griseus_crigri
ENSACLG00000016374pabpn18290.204ENSCSEG00000008774pabpn19595.045Cynoglossus_semilaevis
ENSACLG00000016374pabpn110090.236ENSCVAG00000003152pabpn110091.582Cyprinodon_variegatus
ENSACLG00000016374pabpn110094.774ENSDARG00000045373pabpn110095.872Danio_rerio
ENSACLG00000016374pabpn16680.905ENSDNOG00000023682PABPN18467.045Dasypus_novemcinctus
ENSACLG00000016374pabpn16680.402ENSDORG00000028966-8466.288Dipodomys_ordii
ENSACLG00000016374pabpn17856.652FBgn0005648Pabp29856.652Drosophila_melanogaster
ENSACLG00000016374pabpn17770.614ENSEBUG00000002322pabpn19670.614Eptatretus_burgeri
ENSACLG00000016374pabpn16680.905ENSEASG00005011716PABPN18567.045Equus_asinus_asinus
ENSACLG00000016374pabpn16780.303ENSECAG00000011652PABPN18568.750Equus_caballus
ENSACLG00000016374pabpn16579.793ENSEEUG00000012973-6679.592Erinaceus_europaeus
ENSACLG00000016374pabpn17592.727ENSELUG00000022654pabpn19592.952Esox_lucius
ENSACLG00000016374pabpn16680.905ENSFCAG00000031922PABPN18467.045Felis_catus
ENSACLG00000016374pabpn15380.503ENSFDAG00000018381BCL2L2-PABPN18980.503Fukomys_damarensis
ENSACLG00000016374pabpn17593.953ENSFHEG00000007215pabpn19494.144Fundulus_heteroclitus
ENSACLG00000016374pabpn110093.056ENSGMOG00000003922pabpn110093.403Gadus_morhua
ENSACLG00000016374pabpn16181.768ENSGALG00000052930-6078.095Gallus_gallus
ENSACLG00000016374pabpn17795.536ENSGAFG00000017099pabpn19495.536Gambusia_affinis
ENSACLG00000016374pabpn110095.470ENSGACG00000002167pabpn110095.470Gasterosteus_aculeatus
ENSACLG00000016374pabpn17263.755ENSGGOG00000025919-9366.197Gorilla_gorilla
ENSACLG00000016374pabpn17166.667ENSGGOG00000039675-8963.180Gorilla_gorilla
ENSACLG00000016374pabpn17674.336ENSGGOG00000022683-7875.455Gorilla_gorilla
ENSACLG00000016374pabpn17797.748ENSHBUG00000019523pabpn19497.748Haplochromis_burtoni
ENSACLG00000016374pabpn15364.286ENSHGLG00000009842-8764.286Heterocephalus_glaber_female
ENSACLG00000016374pabpn16680.402ENSHGLG00000002927-9389.933Heterocephalus_glaber_female
ENSACLG00000016374pabpn16472.775ENSHGLG00000018588-7072.775Heterocephalus_glaber_female
ENSACLG00000016374pabpn16472.775ENSHGLG00100015565-8764.224Heterocephalus_glaber_male
ENSACLG00000016374pabpn17571.111ENSHGLG00100006673-9389.933Heterocephalus_glaber_male
ENSACLG00000016374pabpn17796.396ENSHCOG00000004655pabpn19596.396Hippocampus_comes
ENSACLG00000016374pabpn110081.017ENSIPUG00000008085PABPN19495.495Ictalurus_punctatus
ENSACLG00000016374pabpn17587.442ENSIPUG00000000180-9487.838Ictalurus_punctatus
ENSACLG00000016374pabpn15381.132ENSSTOG00000029847BCL2L2-PABPN18981.132Ictidomys_tridecemlineatus
ENSACLG00000016374pabpn15381.132ENSJJAG00000023507Gm205218981.132Jaculus_jaculus
ENSACLG00000016374pabpn110095.833ENSKMAG00000018748pabpn110095.833Kryptolebias_marmoratus
ENSACLG00000016374pabpn110096.864ENSLBEG00000027266pabpn110096.864Labrus_bergylta
ENSACLG00000016374pabpn16185.475ENSLACG00000000646pabpn18482.051Latimeria_chalumnae
ENSACLG00000016374pabpn16665.979ENSLOCG00000004694pabpn1l9265.025Lepisosteus_oculatus
ENSACLG00000016374pabpn110090.625ENSLOCG00000000796pabpn110090.972Lepisosteus_oculatus
ENSACLG00000016374pabpn17670.996ENSMFAG00000032183BCL2L2-PABPN18981.132Macaca_fascicularis
ENSACLG00000016374pabpn16468.750ENSMMUG00000048382-8658.621Macaca_mulatta
ENSACLG00000016374pabpn17670.996ENSMMUG00000014747BCL2L2-PABPN19481.159Macaca_mulatta
ENSACLG00000016374pabpn17674.336ENSMNEG00000045065BCL2L2-PABPN17875.455Macaca_nemestrina
ENSACLG00000016374pabpn15869.767ENSMNEG00000035750-9273.684Macaca_nemestrina
ENSACLG00000016374pabpn17670.996ENSMLEG00000043862BCL2L2-PABPN18981.132Mandrillus_leucophaeus
ENSACLG00000016374pabpn15366.242ENSMLEG00000034623-9272.180Mandrillus_leucophaeus
ENSACLG00000016374pabpn110095.470ENSMAMG00000007979pabpn110095.470Mastacembelus_armatus
ENSACLG00000016374pabpn110097.561ENSMZEG00005011904pabpn110097.561Maylandia_zebra
ENSACLG00000016374pabpn16680.402ENSMAUG00000007383Gm205218566.540Mesocricetus_auratus
ENSACLG00000016374pabpn17674.890ENSMICG00000010002BCL2L2-PABPN17876.233Microcebus_murinus
ENSACLG00000016374pabpn16679.899ENSMOCG00000018557Gm205219089.262Microtus_ochrogaster
ENSACLG00000016374pabpn110097.213ENSMMOG00000005405pabpn110097.213Mola_mola
ENSACLG00000016374pabpn16677.949ENSMODG00000004535-8566.667Monodelphis_domestica
ENSACLG00000016374pabpn110096.516ENSMALG00000019612pabpn110096.516Monopterus_albus
ENSACLG00000016374pabpn16181.768MGP_CAROLIEiJ_G0019276Gm205215481.768Mus_caroli
ENSACLG00000016374pabpn16679.397MGP_CAROLIEiJ_G0019277Pabpn19982.317Mus_caroli
ENSACLG00000016374pabpn16679.899ENSMUSG00000022194Pabpn19982.317Mus_musculus
ENSACLG00000016374pabpn16182.320ENSMUSG00000092232Gm205215482.320Mus_musculus
ENSACLG00000016374pabpn16182.320MGP_PahariEiJ_G0030294Gm205215482.320Mus_pahari
ENSACLG00000016374pabpn16679.899MGP_PahariEiJ_G0030295Pabpn110093.023Mus_pahari
ENSACLG00000016374pabpn16679.899MGP_SPRETEiJ_G0020166Pabpn19982.317Mus_spretus
ENSACLG00000016374pabpn16182.320MGP_SPRETEiJ_G0020165Gm205215482.320Mus_spretus
ENSACLG00000016374pabpn15282.353ENSMPUG00000006775-9082.353Mustela_putorius_furo
ENSACLG00000016374pabpn16182.320ENSMLUG00000003800-9582.320Myotis_lucifugus
ENSACLG00000016374pabpn16380.541ENSMLUG00000028677-7972.197Myotis_lucifugus
ENSACLG00000016374pabpn16478.421ENSMLUG00000012452-7869.008Myotis_lucifugus
ENSACLG00000016374pabpn16183.425ENSNGAG00000019529Gm205215483.425Nannospalax_galili
ENSACLG00000016374pabpn110097.909ENSNBRG00000023955pabpn110097.909Neolamprologus_brichardi
ENSACLG00000016374pabpn17670.996ENSNLEG00000015007-6981.633Nomascus_leucogenys
ENSACLG00000016374pabpn16369.519ENSNLEG00000030598-7769.474Nomascus_leucogenys
ENSACLG00000016374pabpn16574.074ENSODEG00000003739-8662.055Octodon_degus
ENSACLG00000016374pabpn15673.171ENSODEG00000011555-8171.895Octodon_degus
ENSACLG00000016374pabpn17670.563ENSODEG00000002083BCL2L2-PABPN16677.033Octodon_degus
ENSACLG00000016374pabpn110097.909ENSONIG00000008112pabpn110097.909Oreochromis_niloticus
ENSACLG00000016374pabpn16680.402ENSOCUG00000016174PABPN19268.750Oryctolagus_cuniculus
ENSACLG00000016374pabpn110096.167ENSORLG00000027900pabpn110096.167Oryzias_latipes
ENSACLG00000016374pabpn110093.559ENSORLG00020004681pabpn110093.559Oryzias_latipes_hni
ENSACLG00000016374pabpn110093.559ENSORLG00015000018pabpn110093.559Oryzias_latipes_hsok
ENSACLG00000016374pabpn110096.167ENSOMEG00000016618pabpn110096.167Oryzias_melastigma
ENSACLG00000016374pabpn16680.905ENSOGAG00000008710PABPN18467.045Otolemur_garnettii
ENSACLG00000016374pabpn17670.996ENSOARG00000019336BCL2L2-PABPN15083.425Ovis_aries
ENSACLG00000016374pabpn15366.667ENSPPAG00000039421-8866.038Pan_paniscus
ENSACLG00000016374pabpn17670.996ENSPPAG00000028984BCL2L2-PABPN19082.353Pan_paniscus
ENSACLG00000016374pabpn16680.905ENSPPRG00000010567PABPN18467.045Panthera_pardus
ENSACLG00000016374pabpn15381.132ENSPTIG00000001063BCL2L2-PABPN18981.132Panthera_tigris_altaica
ENSACLG00000016374pabpn17761.947ENSPTRG00000047273-9157.769Pan_troglodytes
ENSACLG00000016374pabpn17674.336ENSPTRG00000006167BCL2L27875.455Pan_troglodytes
ENSACLG00000016374pabpn17674.336ENSPANG00000021100BCL2L2-PABPN17875.455Papio_anubis
ENSACLG00000016374pabpn16369.730ENSPANG00000023326-9274.436Papio_anubis
ENSACLG00000016374pabpn110087.197ENSPKIG00000018052pabpn110089.965Paramormyrops_kingsleyae
ENSACLG00000016374pabpn15669.325ENSPKIG00000008340pabpn1l8665.385Paramormyrops_kingsleyae
ENSACLG00000016374pabpn110094.425ENSPKIG00000008144-10094.425Paramormyrops_kingsleyae
ENSACLG00000016374pabpn110090.592ENSPMGG00000022027pabpn110090.592Periophthalmus_magnuspinnatus
ENSACLG00000016374pabpn16680.402ENSPEMG00000008332Gm205219089.333Peromyscus_maniculatus_bairdii
ENSACLG00000016374pabpn16574.074ENSPMAG00000006212pabpn19368.103Petromyzon_marinus
ENSACLG00000016374pabpn16677.949ENSPCIG00000027751-8466.667Phascolarctos_cinereus
ENSACLG00000016374pabpn110090.572ENSPFOG00000010351pabpn110092.256Poecilia_formosa
ENSACLG00000016374pabpn110095.502ENSPLAG00000022696pabpn110095.502Poecilia_latipinna
ENSACLG00000016374pabpn17592.627ENSPMEG00000020856pabpn19494.196Poecilia_mexicana
ENSACLG00000016374pabpn110095.156ENSPREG00000011278pabpn110095.156Poecilia_reticulata
ENSACLG00000016374pabpn16581.865ENSPPYG00000005663PABPN18869.721Pongo_abelii
ENSACLG00000016374pabpn16568.557ENSPCAG00000005902PABPN18559.289Procavia_capensis
ENSACLG00000016374pabpn17674.890ENSPCOG00000028047BCL2L2-PABPN17876.233Propithecus_coquereli
ENSACLG00000016374pabpn16777.941ENSPVAG00000005270PABPN18367.969Pteropus_vampyrus
ENSACLG00000016374pabpn17797.748ENSPNYG00000013182pabpn19497.748Pundamilia_nyererei
ENSACLG00000016374pabpn110094.774ENSPNAG00000023526pabpn19994.774Pygocentrus_nattereri
ENSACLG00000016374pabpn15667.081ENSPNAG00000021666pabpn1l8467.241Pygocentrus_nattereri
ENSACLG00000016374pabpn16680.402ENSRNOG00000042195Pabpn18466.794Rattus_norvegicus
ENSACLG00000016374pabpn16473.158ENSRBIG00000042811-8769.231Rhinopithecus_bieti
ENSACLG00000016374pabpn17571.556ENSRBIG00000040762BCL2L2-PABPN15484.571Rhinopithecus_bieti
ENSACLG00000016374pabpn16871.569ENSRBIG00000039547-7965.741Rhinopithecus_bieti
ENSACLG00000016374pabpn17571.556ENSRROG00000045535BCL2L2-PABPN18981.132Rhinopithecus_roxellana
ENSACLG00000016374pabpn16766.176ENSRROG00000036409-6863.063Rhinopithecus_roxellana
ENSACLG00000016374pabpn16771.859ENSRROG00000040409-7965.741Rhinopithecus_roxellana
ENSACLG00000016374pabpn17667.213ENSSBOG00000026930BCL2L2-PABPN19082.353Saimiri_boliviensis_boliviensis
ENSACLG00000016374pabpn17760.526ENSSHAG00000007707-9360.526Sarcophilus_harrisii
ENSACLG00000016374pabpn15588.050ENSSHAG00000014841-8483.152Sarcophilus_harrisii
ENSACLG00000016374pabpn15171.429ENSSFOG00015015833pabpn1l7767.836Scleropages_formosus
ENSACLG00000016374pabpn17594.419ENSSFOG00015014718pabpn19494.595Scleropages_formosus
ENSACLG00000016374pabpn110088.153ENSSFOG00015012565pabpn110088.153Scleropages_formosus
ENSACLG00000016374pabpn110096.516ENSSMAG00000020157pabpn110096.516Scophthalmus_maximus
ENSACLG00000016374pabpn110096.864ENSSDUG00000020582pabpn110096.864Seriola_dumerili
ENSACLG00000016374pabpn17796.847ENSSLDG00000007118pabpn19496.847Seriola_lalandi_dorsalis
ENSACLG00000016374pabpn15084.354ENSSPUG00000018308-8782.692Sphenodon_punctatus
ENSACLG00000016374pabpn110096.528ENSSPAG00000021658pabpn110096.528Stegastes_partitus
ENSACLG00000016374pabpn17670.996ENSSSCG00000002023PABPN18567.045Sus_scrofa
ENSACLG00000016374pabpn16864.322ENSSSCG00000034805-7560.417Sus_scrofa
ENSACLG00000016374pabpn110095.470ENSTRUG00000023664pabpn110095.470Takifugu_rubripes
ENSACLG00000016374pabpn17194.608ENSTNIG00000005369pabpn19394.608Tetraodon_nigroviridis
ENSACLG00000016374pabpn16680.905ENSUAMG00000024460PABPN16677.512Ursus_americanus
ENSACLG00000016374pabpn17670.996ENSUMAG00000014288BCL2L2-PABPN15483.425Ursus_maritimus
ENSACLG00000016374pabpn17670.996ENSVVUG00000019912BCL2L2-PABPN17283.060Vulpes_vulpes
ENSACLG00000016374pabpn16780.612ENSXETG00000014597pabpn17177.778Xenopus_tropicalis
ENSACLG00000016374pabpn15585.535ENSXCOG00000005158pabpn19185.535Xiphophorus_couchianus
ENSACLG00000016374pabpn110091.246ENSXMAG00000006196pabpn110092.929Xiphophorus_maculatus

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