EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000016451 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 2852 bases
Position: chrLS419793.1:2163932-2166783
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000024170	Exo_endo_phos	PF03372.23	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000024745	-	669	-	ENSACLP00000024170	222 (aa)	-	-

Gene Model

Click here to download ENSACLG00000016451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000016451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000016451	-	96	64.019	ENSACLG00000014940	-	75	64.019
ENSACLG00000016451	-	94	30.137	ENSACLG00000001544	-	58	30.137
ENSACLG00000016451	-	94	31.222	ENSACLG00000005243	-	84	31.222
ENSACLG00000016451	-	91	63.235	ENSACLG00000014815	-	58	63.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000016451	-	97	47.005	ENSAMXG00000040050	-	80	47.005	Astyanax_mexicanus
ENSACLG00000016451	-	93	39.806	ENSAMXG00000034661	-	61	39.806	Astyanax_mexicanus
ENSACLG00000016451	-	70	43.226	ENSAMXG00000029029	-	68	43.226	Astyanax_mexicanus
ENSACLG00000016451	-	86	96.842	ENSHBUG00000015936	-	100	96.842	Haplochromis_burtoni
ENSACLG00000016451	-	78	94.798	ENSMZEG00005002063	-	89	94.798	Maylandia_zebra
ENSACLG00000016451	-	90	84.500	ENSMZEG00005021230	-	95	84.500	Maylandia_zebra
ENSACLG00000016451	-	90	84.500	ENSMZEG00005021224	-	95	84.500	Maylandia_zebra
ENSACLG00000016451	-	85	97.884	ENSMZEG00005021213	-	78	97.884	Maylandia_zebra
ENSACLG00000016451	-	78	97.688	ENSMZEG00005001800	-	94	97.688	Maylandia_zebra
ENSACLG00000016451	-	98	61.947	ENSMZEG00005003630	-	83	61.947	Maylandia_zebra
ENSACLG00000016451	-	86	97.368	ENSPNYG00000002216	-	100	97.368	Pundamilia_nyererei
ENSACLG00000016451	-	96	39.906	ENSPNAG00000014766	-	50	39.906	Pygocentrus_nattereri