EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000016551 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 4036 bases
Position: chr22:4172391-4176426
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000024333	RVT_1	PF00078.27	1.6e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000024915	-	4036	-	ENSACLP00000024333	1010 (aa)	-	-

Gene Model

Click here to download ENSACLG00000016551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000016551's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000016551	-	74	58.501	ENSACLG00000001773	-	99	58.501
ENSACLG00000016551	-	70	52.891	ENSACLG00000019498	-	99	52.891
ENSACLG00000016551	-	71	49.860	ENSACLG00000001858	-	99	49.860
ENSACLG00000016551	-	66	49.850	ENSACLG00000007954	-	99	49.850
ENSACLG00000016551	-	56	30.192	ENSACLG00000016231	-	97	30.192
ENSACLG00000016551	-	82	99.276	ENSACLG00000003707	-	99	99.276
ENSACLG00000016551	-	99	54.038	ENSACLG00000007650	-	97	54.038
ENSACLG00000016551	-	73	49.593	ENSACLG00000001102	-	96	49.593
ENSACLG00000016551	-	61	99.352	ENSACLG00000027577	-	100	99.352
ENSACLG00000016551	-	55	54.480	ENSACLG00000016956	-	99	54.480
ENSACLG00000016551	-	85	50.348	ENSACLG00000013374	-	99	50.348
ENSACLG00000016551	-	68	60.116	ENSACLG00000021942	-	100	60.116
ENSACLG00000016551	-	85	55.257	ENSACLG00000018002	-	100	55.257
ENSACLG00000016551	-	66	50.300	ENSACLG00000005489	-	99	50.300
ENSACLG00000016551	-	50	51.677	ENSACLG00000008551	-	92	51.677
ENSACLG00000016551	-	99	57.328	ENSACLG00000017200	-	97	57.328
ENSACLG00000016551	-	94	54.478	ENSACLG00000018778	-	93	54.478
ENSACLG00000016551	-	51	56.360	ENSACLG00000023788	-	99	56.360
ENSACLG00000016551	-	80	60.074	ENSACLG00000004427	-	99	60.074
ENSACLG00000016551	-	97	49.949	ENSACLG00000002312	-	97	49.949
ENSACLG00000016551	-	59	57.454	ENSACLG00000017241	-	99	57.454
ENSACLG00000016551	-	58	53.741	ENSACLG00000020009	-	100	53.741
ENSACLG00000016551	-	65	99.696	ENSACLG00000020849	-	100	99.696
ENSACLG00000016551	-	65	52.905	ENSACLG00000000579	-	99	52.905
ENSACLG00000016551	-	91	98.911	ENSACLG00000008988	-	99	98.911
ENSACLG00000016551	-	74	98.522	ENSACLG00000027127	-	100	98.522

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000016551	-	76	46.003	ENSKMAG00000019013	-	99	46.214	Kryptolebias_marmoratus
ENSACLG00000016551	-	65	48.939	ENSORLG00000025570	-	100	48.939	Oryzias_latipes
ENSACLG00000016551	-	98	46.177	ENSORLG00000029564	-	96	46.177	Oryzias_latipes
ENSACLG00000016551	-	74	51.206	ENSORLG00000025095	-	99	51.206	Oryzias_latipes
ENSACLG00000016551	-	54	53.273	ENSORLG00000022075	-	99	53.273	Oryzias_latipes
ENSACLG00000016551	-	59	34.396	ENSORLG00020011415	-	96	34.596	Oryzias_latipes_hni
ENSACLG00000016551	-	65	33.483	ENSORLG00020016931	-	92	33.483	Oryzias_latipes_hni
ENSACLG00000016551	-	74	55.925	ENSORLG00020011465	-	93	56.075	Oryzias_latipes_hni
ENSACLG00000016551	-	61	32.750	ENSORLG00015018882	-	99	32.750	Oryzias_latipes_hsok
ENSACLG00000016551	-	58	46.870	ENSOMEG00000010146	-	100	46.870	Oryzias_melastigma
ENSACLG00000016551	-	97	45.482	ENSOMEG00000001762	-	98	45.482	Oryzias_melastigma
ENSACLG00000016551	-	61	30.236	ENSOMEG00000002083	-	98	30.236	Oryzias_melastigma
ENSACLG00000016551	-	57	53.713	ENSPMEG00000019493	-	99	53.713	Poecilia_mexicana
ENSACLG00000016551	-	70	52.550	ENSXMAG00000022354	-	100	52.550	Xiphophorus_maculatus