EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000016586 (Gene tree)
Gene ID: 113035795
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 15064 bases
Position: chr14:16013241-16028304
Accession: 113035795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000024521	GTP_EFTU	PF00009.27	7.9e-63	1	1
ENSACLP00000024451	GTP_EFTU	PF00009.27	8.3e-63	1	1
ENSACLP00000024521	GTP_EFTU_D2	PF03144.25	1.1e-16	1	1
ENSACLP00000024451	GTP_EFTU_D2	PF03144.25	1.2e-16	1	1
ENSACLP00000024521	EFG_IV	PF03764.18	7.4e-38	1	1
ENSACLP00000024451	EFG_IV	PF03764.18	7.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000025104	-	2193	-	ENSACLP00000024521	730 (aa)	-	-
ENSACLT00000025035	-	2247	-	ENSACLP00000024451	748 (aa)	XP_026047304	UPI000E4129C4

Gene Model

Click here to download ENSACLG00000016586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000016586's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000016586	gfm1	98	32.695	ENSACLG00000027430	gfm2	97	32.822
ENSACLG00000016586	gfm1	75	38.926	ENSACLG00000023595	-	72	38.926
ENSACLG00000016586	gfm1	76	39.597	ENSACLG00000003034	eef2b	73	39.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000016586	gfm1	99	80.082	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSACLG00000016586	gfm1	92	89.244	ENSAPOG00000016489	gfm1	98	89.244	Acanthochromis_polyacanthus
ENSACLG00000016586	gfm1	98	80.972	ENSAMEG00000013542	GFM1	95	82.591	Ailuropoda_melanoleuca
ENSACLG00000016586	gfm1	99	88.509	ENSACIG00000014465	gfm1	99	86.606	Amphilophus_citrinellus
ENSACLG00000016586	gfm1	100	90.107	ENSAOCG00000006023	gfm1	100	90.107	Amphiprion_ocellaris
ENSACLG00000016586	gfm1	100	89.840	ENSAPEG00000024499	gfm1	100	89.840	Amphiprion_percula
ENSACLG00000016586	gfm1	100	90.508	ENSATEG00000013789	gfm1	100	90.508	Anabas_testudineus
ENSACLG00000016586	gfm1	99	79.642	ENSAPLG00000005022	GFM1	100	81.241	Anas_platyrhynchos
ENSACLG00000016586	gfm1	99	79.310	ENSACAG00000006829	GFM1	98	80.414	Anolis_carolinensis
ENSACLG00000016586	gfm1	100	79.361	ENSANAG00000035983	GFM1	100	79.361	Aotus_nancymaae
ENSACLG00000016586	gfm1	100	84.759	ENSAMXG00000013435	gfm1	97	86.420	Astyanax_mexicanus
ENSACLG00000016586	gfm1	98	80.721	ENSBTAG00000027795	GFM1	95	82.173	Bos_taurus
ENSACLG00000016586	gfm1	96	57.550	WBGene00009246	gfm-1	95	58.287	Caenorhabditis_elegans
ENSACLG00000016586	gfm1	99	80.907	ENSCJAG00000000363	GFM1	97	81.956	Callithrix_jacchus
ENSACLG00000016586	gfm1	98	80.860	ENSCAFG00000009006	GFM1	100	82.101	Canis_familiaris
ENSACLG00000016586	gfm1	98	80.860	ENSCAFG00020005878	GFM1	98	82.451	Canis_lupus_dingo
ENSACLG00000016586	gfm1	98	80.860	ENSCHIG00000015220	GFM1	95	82.312	Capra_hircus
ENSACLG00000016586	gfm1	99	80.632	ENSTSYG00000002013	GFM1	100	79.283	Carlito_syrichta
ENSACLG00000016586	gfm1	99	69.346	ENSCAPG00000005699	GFM1	97	71.271	Cavia_aperea
ENSACLG00000016586	gfm1	100	79.045	ENSCPOG00000001194	GFM1	100	79.045	Cavia_porcellus
ENSACLG00000016586	gfm1	99	80.357	ENSCCAG00000025561	GFM1	100	79.338	Cebus_capucinus
ENSACLG00000016586	gfm1	100	79.361	ENSCATG00000037622	GFM1	100	79.361	Cercocebus_atys
ENSACLG00000016586	gfm1	99	78.904	ENSCLAG00000002503	GFM1	96	80.028	Chinchilla_lanigera
ENSACLG00000016586	gfm1	100	79.361	ENSCSAG00000012162	GFM1	100	79.361	Chlorocebus_sabaeus
ENSACLG00000016586	gfm1	100	70.690	ENSCHOG00000004867	GFM1	100	70.690	Choloepus_hoffmanni
ENSACLG00000016586	gfm1	100	80.214	ENSCPBG00000018367	GFM1	99	80.214	Chrysemys_picta_bellii
ENSACLG00000016586	gfm1	96	59.244	ENSCING00000011960	-	92	60.000	Ciona_intestinalis
ENSACLG00000016586	gfm1	96	59.716	ENSCSAVG00000008514	-	99	59.829	Ciona_savignyi
ENSACLG00000016586	gfm1	99	80.220	ENSCANG00000031714	GFM1	100	79.361	Colobus_angolensis_palliatus
ENSACLG00000016586	gfm1	100	79.255	ENSCGRG00001022095	GFM1	100	79.255	Cricetulus_griseus_chok1gshd
ENSACLG00000016586	gfm1	100	79.255	ENSCGRG00000012043	GFM1	100	79.255	Cricetulus_griseus_crigri
ENSACLG00000016586	gfm1	99	82.735	ENSCSEG00000017088	gfm1	99	83.679	Cynoglossus_semilaevis
ENSACLG00000016586	gfm1	100	93.048	ENSCVAG00000004126	gfm1	100	93.048	Cyprinodon_variegatus
ENSACLG00000016586	gfm1	100	82.353	ENSDARG00000063624	gfm1	100	82.353	Danio_rerio
ENSACLG00000016586	gfm1	56	79.951	ENSDNOG00000016385	-	100	79.951	Dasypus_novemcinctus
ENSACLG00000016586	gfm1	100	78.619	ENSDORG00000014165	Gfm1	100	78.619	Dipodomys_ordii
ENSACLG00000016586	gfm1	97	67.932	FBgn0263133	mEFG1	95	68.688	Drosophila_melanogaster
ENSACLG00000016586	gfm1	98	73.823	ENSETEG00000019197	GFM1	95	73.925	Echinops_telfairi
ENSACLG00000016586	gfm1	93	62.777	ENSEBUG00000012794	gfm1	100	63.259	Eptatretus_burgeri
ENSACLG00000016586	gfm1	98	59.336	ENSEEUG00000000429	GFM1	99	60.833	Erinaceus_europaeus
ENSACLG00000016586	gfm1	100	85.695	ENSELUG00000014728	gfm1	100	85.695	Esox_lucius
ENSACLG00000016586	gfm1	99	80.220	ENSFCAG00000013291	GFM1	96	81.543	Felis_catus
ENSACLG00000016586	gfm1	93	79.764	ENSFALG00000007619	GFM1	100	81.037	Ficedula_albicollis
ENSACLG00000016586	gfm1	99	80.082	ENSFDAG00000016559	GFM1	100	78.912	Fukomys_damarensis
ENSACLG00000016586	gfm1	100	91.979	ENSFHEG00000006091	gfm1	100	91.979	Fundulus_heteroclitus
ENSACLG00000016586	gfm1	99	85.185	ENSGMOG00000010161	gfm1	100	86.382	Gadus_morhua
ENSACLG00000016586	gfm1	99	79.477	ENSGALG00000009634	GFM1	98	80.966	Gallus_gallus
ENSACLG00000016586	gfm1	100	90.642	ENSGAFG00000012527	gfm1	100	90.642	Gambusia_affinis
ENSACLG00000016586	gfm1	100	89.720	ENSGACG00000009864	gfm1	100	89.720	Gasterosteus_aculeatus
ENSACLG00000016586	gfm1	99	80.357	ENSGGOG00000003085	GFM1	100	79.361	Gorilla_gorilla
ENSACLG00000016586	gfm1	100	99.599	ENSHBUG00000002120	gfm1	100	99.599	Haplochromis_burtoni
ENSACLG00000016586	gfm1	99	79.396	ENSHGLG00000016855	GFM1	100	78.515	Heterocephalus_glaber_female
ENSACLG00000016586	gfm1	99	79.396	ENSHGLG00100013049	GFM1	100	78.515	Heterocephalus_glaber_male
ENSACLG00000016586	gfm1	100	89.572	ENSHCOG00000007638	gfm1	100	89.572	Hippocampus_comes
ENSACLG00000016586	gfm1	100	84.759	ENSIPUG00000005873	gfm1	100	84.759	Ictalurus_punctatus
ENSACLG00000016586	gfm1	99	78.898	ENSSTOG00000010150	GFM1	100	78.898	Ictidomys_tridecemlineatus
ENSACLG00000016586	gfm1	99	79.505	ENSJJAG00000016447	Gfm1	97	80.690	Jaculus_jaculus
ENSACLG00000016586	gfm1	100	87.834	ENSKMAG00000020768	gfm1	100	87.834	Kryptolebias_marmoratus
ENSACLG00000016586	gfm1	96	89.474	ENSLBEG00000021315	gfm1	100	91.298	Labrus_bergylta
ENSACLG00000016586	gfm1	100	80.214	ENSLACG00000012295	GFM1	100	80.214	Latimeria_chalumnae
ENSACLG00000016586	gfm1	99	79.161	ENSLOCG00000003778	gfm1	100	80.601	Lepisosteus_oculatus
ENSACLG00000016586	gfm1	99	78.159	ENSLAFG00000010945	GFM1	99	78.472	Loxodonta_africana
ENSACLG00000016586	gfm1	99	80.082	ENSMFAG00000035731	GFM1	97	81.267	Macaca_fascicularis
ENSACLG00000016586	gfm1	99	80.220	ENSMMUG00000004961	GFM1	97	81.267	Macaca_mulatta
ENSACLG00000016586	gfm1	100	79.228	ENSMNEG00000033245	GFM1	100	79.228	Macaca_nemestrina
ENSACLG00000016586	gfm1	99	78.514	ENSMLEG00000030908	GFM1	99	79.324	Mandrillus_leucophaeus
ENSACLG00000016586	gfm1	100	91.176	ENSMAMG00000011760	gfm1	100	91.176	Mastacembelus_armatus
ENSACLG00000016586	gfm1	100	99.866	ENSMZEG00005016639	gfm1	100	99.866	Maylandia_zebra
ENSACLG00000016586	gfm1	99	79.339	ENSMGAG00000010641	GFM1	97	80.939	Meleagris_gallopavo
ENSACLG00000016586	gfm1	99	80.743	ENSMAUG00000000611	Gfm1	97	81.793	Mesocricetus_auratus
ENSACLG00000016586	gfm1	99	81.044	ENSMICG00000049086	GFM1	96	82.231	Microcebus_murinus
ENSACLG00000016586	gfm1	99	81.163	ENSMOCG00000000465	Gfm1	96	82.337	Microtus_ochrogaster
ENSACLG00000016586	gfm1	99	89.865	ENSMMOG00000012538	gfm1	99	89.865	Mola_mola
ENSACLG00000016586	gfm1	99	80.461	ENSMODG00000015673	GFM1	99	80.461	Monodelphis_domestica
ENSACLG00000016586	gfm1	99	87.106	ENSMALG00000012508	gfm1	95	89.819	Monopterus_albus
ENSACLG00000016586	gfm1	98	80.694	MGP_CAROLIEiJ_G0025052	Gfm1	95	82.287	Mus_caroli
ENSACLG00000016586	gfm1	98	80.972	ENSMUSG00000027774	Gfm1	95	82.287	Mus_musculus
ENSACLG00000016586	gfm1	99	80.330	MGP_PahariEiJ_G0026495	Gfm1	97	81.517	Mus_pahari
ENSACLG00000016586	gfm1	98	80.972	MGP_SPRETEiJ_G0025994	Gfm1	95	82.287	Mus_spretus
ENSACLG00000016586	gfm1	99	80.137	ENSMPUG00000002859	GFM1	96	81.680	Mustela_putorius_furo
ENSACLG00000016586	gfm1	99	80.769	ENSMLUG00000000452	GFM1	96	82.094	Myotis_lucifugus
ENSACLG00000016586	gfm1	100	78.267	ENSNGAG00000012375	Gfm1	100	78.267	Nannospalax_galili
ENSACLG00000016586	gfm1	100	96.854	ENSNBRG00000004631	gfm1	99	98.489	Neolamprologus_brichardi
ENSACLG00000016586	gfm1	99	80.357	ENSNLEG00000004176	GFM1	100	79.361	Nomascus_leucogenys
ENSACLG00000016586	gfm1	93	71.114	ENSMEUG00000007784	GFM1	99	72.794	Notamacropus_eugenii
ENSACLG00000016586	gfm1	99	79.670	ENSOPRG00000009860	GFM1	99	80.381	Ochotona_princeps
ENSACLG00000016586	gfm1	99	80.137	ENSODEG00000004316	GFM1	100	78.912	Octodon_degus
ENSACLG00000016586	gfm1	100	98.529	ENSONIG00000003772	gfm1	100	98.529	Oreochromis_niloticus
ENSACLG00000016586	gfm1	99	80.632	ENSOCUG00000013561	GFM1	97	81.868	Oryctolagus_cuniculus
ENSACLG00000016586	gfm1	97	89.859	ENSORLG00000006487	gfm1	100	91.384	Oryzias_latipes
ENSACLG00000016586	gfm1	100	89.973	ENSORLG00020003362	gfm1	100	89.973	Oryzias_latipes_hni
ENSACLG00000016586	gfm1	100	90.107	ENSORLG00015005829	gfm1	100	90.107	Oryzias_latipes_hsok
ENSACLG00000016586	gfm1	100	92.112	ENSOMEG00000012894	gfm1	100	92.112	Oryzias_melastigma
ENSACLG00000016586	gfm1	99	79.808	ENSOGAG00000008298	GFM1	96	80.992	Otolemur_garnettii
ENSACLG00000016586	gfm1	98	79.972	ENSOARG00000002409	GFM1	99	81.415	Ovis_aries
ENSACLG00000016586	gfm1	99	80.357	ENSPPAG00000033881	GFM1	100	79.361	Pan_paniscus
ENSACLG00000016586	gfm1	99	80.220	ENSPPRG00000009281	GFM1	96	81.543	Panthera_pardus
ENSACLG00000016586	gfm1	99	80.082	ENSPTIG00000012416	GFM1	96	81.405	Panthera_tigris_altaica
ENSACLG00000016586	gfm1	99	80.357	ENSPTRG00000015570	GFM1	100	79.361	Pan_troglodytes
ENSACLG00000016586	gfm1	100	79.228	ENSPANG00000016512	GFM1	100	79.228	Papio_anubis
ENSACLG00000016586	gfm1	100	83.289	ENSPKIG00000004876	gfm1	100	83.289	Paramormyrops_kingsleyae
ENSACLG00000016586	gfm1	100	80.882	ENSPSIG00000012567	GFM1	99	80.882	Pelodiscus_sinensis
ENSACLG00000016586	gfm1	99	88.017	ENSPMGG00000014068	gfm1	100	88.276	Periophthalmus_magnuspinnatus
ENSACLG00000016586	gfm1	100	79.361	ENSPEMG00000008942	Gfm1	100	79.361	Peromyscus_maniculatus_bairdii
ENSACLG00000016586	gfm1	86	78.281	ENSPCIG00000020195	GFM1	98	79.650	Phascolarctos_cinereus
ENSACLG00000016586	gfm1	100	91.444	ENSPFOG00000011022	gfm1	100	91.444	Poecilia_formosa
ENSACLG00000016586	gfm1	99	90.771	ENSPLAG00000019585	gfm1	100	91.152	Poecilia_latipinna
ENSACLG00000016586	gfm1	100	91.310	ENSPMEG00000012376	gfm1	100	91.310	Poecilia_mexicana
ENSACLG00000016586	gfm1	100	91.176	ENSPREG00000001332	gfm1	95	91.176	Poecilia_reticulata
ENSACLG00000016586	gfm1	99	80.220	ENSPPYG00000014244	GFM1	100	79.095	Pongo_abelii
ENSACLG00000016586	gfm1	96	78.865	ENSPCAG00000008934	GFM1	100	80.228	Procavia_capensis
ENSACLG00000016586	gfm1	99	80.357	ENSPCOG00000022259	GFM1	96	81.543	Propithecus_coquereli
ENSACLG00000016586	gfm1	99	79.533	ENSPVAG00000013605	GFM1	96	80.854	Pteropus_vampyrus
ENSACLG00000016586	gfm1	100	99.332	ENSPNYG00000006037	gfm1	100	99.332	Pundamilia_nyererei
ENSACLG00000016586	gfm1	100	84.759	ENSPNAG00000001237	gfm1	100	84.759	Pygocentrus_nattereri
ENSACLG00000016586	gfm1	98	80.972	ENSRNOG00000012873	Gfm1	95	82.427	Rattus_norvegicus
ENSACLG00000016586	gfm1	99	79.945	ENSRBIG00000031363	GFM1	100	79.228	Rhinopithecus_bieti
ENSACLG00000016586	gfm1	99	80.082	ENSRROG00000031081	GFM1	100	79.361	Rhinopithecus_roxellana
ENSACLG00000016586	gfm1	95	56.897	YLR069C	-	94	55.740	Saccharomyces_cerevisiae
ENSACLG00000016586	gfm1	99	80.632	ENSSBOG00000023252	GFM1	97	81.680	Saimiri_boliviensis_boliviensis
ENSACLG00000016586	gfm1	99	81.129	ENSSHAG00000017772	GFM1	98	81.769	Sarcophilus_harrisii
ENSACLG00000016586	gfm1	100	83.578	ENSSFOG00015003117	gfm1	100	83.578	Scleropages_formosus
ENSACLG00000016586	gfm1	100	89.305	ENSSMAG00000013221	gfm1	100	89.305	Scophthalmus_maximus
ENSACLG00000016586	gfm1	100	92.914	ENSSDUG00000018665	gfm1	100	92.914	Seriola_dumerili
ENSACLG00000016586	gfm1	100	92.781	ENSSLDG00000020606	gfm1	100	92.781	Seriola_lalandi_dorsalis
ENSACLG00000016586	gfm1	99	78.099	ENSSPUG00000018686	GFM1	98	79.448	Sphenodon_punctatus
ENSACLG00000016586	gfm1	100	93.048	ENSSPAG00000008800	gfm1	100	93.048	Stegastes_partitus
ENSACLG00000016586	gfm1	98	80.305	ENSSSCG00000025651	GFM1	95	81.755	Sus_scrofa
ENSACLG00000016586	gfm1	100	87.701	ENSTRUG00000009244	gfm1	100	87.701	Takifugu_rubripes
ENSACLG00000016586	gfm1	100	90.107	ENSTNIG00000007729	gfm1	100	90.107	Tetraodon_nigroviridis
ENSACLG00000016586	gfm1	92	73.077	ENSTBEG00000017404	GFM1	89	73.481	Tupaia_belangeri
ENSACLG00000016586	gfm1	99	79.698	ENSTTRG00000001735	GFM1	95	82.033	Tursiops_truncatus
ENSACLG00000016586	gfm1	99	80.357	ENSUAMG00000026381	GFM1	96	81.818	Ursus_americanus
ENSACLG00000016586	gfm1	99	80.357	ENSUMAG00000011268	GFM1	96	81.818	Ursus_maritimus
ENSACLG00000016586	gfm1	99	76.754	ENSVPAG00000009444	GFM1	96	78.207	Vicugna_pacos
ENSACLG00000016586	gfm1	98	80.668	ENSVVUG00000020091	GFM1	100	81.805	Vulpes_vulpes
ENSACLG00000016586	gfm1	100	81.915	ENSXETG00000032551	GFM1	100	81.915	Xenopus_tropicalis
ENSACLG00000016586	gfm1	54	89.136	ENSXCOG00000012590	gfm1	93	89.136	Xiphophorus_couchianus
ENSACLG00000016586	gfm1	100	91.043	ENSXMAG00000000261	gfm1	100	91.043	Xiphophorus_maculatus