EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000016875 (Gene tree)
Gene ID: -
Gene Symbol: sub1b
Alias: rpo2tc1|sub1|zgc:92831
Full Name: SUB1 homolog%2C transcriptional regulator b
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 11678 bases
Position: chr12:194220-205897
Accession: ZDB-GENE-040718-209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000024802	PC4	PF02229.16	1.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000025397	-	4622	-	ENSACLP00000024802	196 (aa)	-	-

Gene Model

Click here to download ENSACLG00000016875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000016875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000016875	sub1b	64	70.079	ENSG00000113387	SUB1	100	74.016	Homo_sapiens
ENSACLG00000016875	sub1b	64	93.600	ENSAPOG00000005917	SUB1	100	93.600	Acanthochromis_polyacanthus
ENSACLG00000016875	sub1b	64	69.531	ENSAMEG00000006238	SUB1	96	73.438	Ailuropoda_melanoleuca
ENSACLG00000016875	sub1b	64	100.000	ENSACIG00000015976	sub1b	100	100.000	Amphilophus_citrinellus
ENSACLG00000016875	sub1b	59	90.435	ENSAOCG00000007313	-	83	97.059	Amphiprion_ocellaris
ENSACLG00000016875	sub1b	57	81.081	ENSAOCG00000002323	-	86	81.132	Amphiprion_ocellaris
ENSACLG00000016875	sub1b	52	86.275	ENSAPEG00000017151	-	76	86.735	Amphiprion_percula
ENSACLG00000016875	sub1b	64	97.600	ENSAPEG00000024347	sub1b	100	97.600	Amphiprion_percula
ENSACLG00000016875	sub1b	64	96.000	ENSATEG00000010340	sub1b	100	96.000	Anabas_testudineus
ENSACLG00000016875	sub1b	64	66.165	ENSACAG00000007974	SUB1	100	66.165	Anolis_carolinensis
ENSACLG00000016875	sub1b	64	68.254	ENSANAG00000023392	-	83	72.222	Aotus_nancymaae
ENSACLG00000016875	sub1b	64	70.079	ENSANAG00000011651	-	100	74.016	Aotus_nancymaae
ENSACLG00000016875	sub1b	64	83.333	ENSAMXG00000037104	sub1b	100	80.159	Astyanax_mexicanus
ENSACLG00000016875	sub1b	66	69.466	ENSBTAG00000021965	SUB1	100	74.016	Bos_taurus
ENSACLG00000016875	sub1b	51	69.608	ENSCJAG00000018718	SUB1	98	74.510	Callithrix_jacchus
ENSACLG00000016875	sub1b	64	69.291	ENSCAFG00000016713	-	96	73.228	Canis_familiaris
ENSACLG00000016875	sub1b	64	66.400	ENSCAFG00000024488	-	100	66.400	Canis_familiaris
ENSACLG00000016875	sub1b	73	62.329	ENSCAFG00000018879	-	99	67.123	Canis_familiaris
ENSACLG00000016875	sub1b	64	69.291	ENSCAFG00020016840	-	100	73.228	Canis_lupus_dingo
ENSACLG00000016875	sub1b	64	68.750	ENSCAFG00020011479	-	77	72.656	Canis_lupus_dingo
ENSACLG00000016875	sub1b	64	70.079	ENSCHIG00000008460	SUB1	100	74.016	Capra_hircus
ENSACLG00000016875	sub1b	67	60.150	ENSTSYG00000035366	-	87	63.910	Carlito_syrichta
ENSACLG00000016875	sub1b	64	70.079	ENSTSYG00000029948	-	100	74.016	Carlito_syrichta
ENSACLG00000016875	sub1b	69	61.702	ENSTSYG00000014069	-	99	65.248	Carlito_syrichta
ENSACLG00000016875	sub1b	64	70.079	ENSCPOG00000031334	SUB1	100	74.016	Cavia_porcellus
ENSACLG00000016875	sub1b	64	66.929	ENSCCAG00000020604	-	100	67.717	Cebus_capucinus
ENSACLG00000016875	sub1b	64	70.079	ENSCCAG00000023605	-	100	74.016	Cebus_capucinus
ENSACLG00000016875	sub1b	64	61.905	ENSCCAG00000017043	-	93	65.873	Cebus_capucinus
ENSACLG00000016875	sub1b	64	67.717	ENSCCAG00000033751	-	95	71.654	Cebus_capucinus
ENSACLG00000016875	sub1b	64	70.079	ENSCATG00000031199	SUB1	100	74.016	Cercocebus_atys
ENSACLG00000016875	sub1b	64	69.531	ENSCLAG00000007522	SUB1	100	71.094	Chinchilla_lanigera
ENSACLG00000016875	sub1b	64	70.079	ENSCSAG00000017172	-	100	74.016	Chlorocebus_sabaeus
ENSACLG00000016875	sub1b	64	68.504	ENSCSAG00000019449	-	100	70.866	Chlorocebus_sabaeus
ENSACLG00000016875	sub1b	64	73.810	ENSCPBG00000024218	SUB1	79	74.603	Chrysemys_picta_bellii
ENSACLG00000016875	sub1b	64	70.079	ENSCANG00000029372	SUB1	100	74.016	Colobus_angolensis_palliatus
ENSACLG00000016875	sub1b	69	55.474	ENSCANG00000028665	-	94	58.394	Colobus_angolensis_palliatus
ENSACLG00000016875	sub1b	64	58.268	ENSCGRG00001014660	-	100	61.417	Cricetulus_griseus_chok1gshd
ENSACLG00000016875	sub1b	64	68.504	ENSCGRG00001003473	-	100	72.441	Cricetulus_griseus_chok1gshd
ENSACLG00000016875	sub1b	64	58.268	ENSCGRG00000019368	-	100	61.417	Cricetulus_griseus_crigri
ENSACLG00000016875	sub1b	64	57.937	ENSCGRG00000001489	-	100	60.317	Cricetulus_griseus_crigri
ENSACLG00000016875	sub1b	64	68.504	ENSCGRG00000001133	-	100	72.441	Cricetulus_griseus_crigri
ENSACLG00000016875	sub1b	63	83.871	ENSDARG00000053446	sub1a	100	81.600	Danio_rerio
ENSACLG00000016875	sub1b	63	82.258	ENSDARG00000007720	sub1b	99	82.258	Danio_rerio
ENSACLG00000016875	sub1b	64	66.929	ENSDNOG00000032396	-	100	70.866	Dasypus_novemcinctus
ENSACLG00000016875	sub1b	64	67.717	ENSDNOG00000040794	-	100	71.654	Dasypus_novemcinctus
ENSACLG00000016875	sub1b	64	68.504	ENSDORG00000013916	Sub1	100	72.441	Dipodomys_ordii
ENSACLG00000016875	sub1b	52	55.340	ENSEBUG00000008746	sub1a	76	46.429	Eptatretus_burgeri
ENSACLG00000016875	sub1b	64	70.079	ENSEASG00005007099	SUB1	100	74.016	Equus_asinus_asinus
ENSACLG00000016875	sub1b	64	70.079	ENSECAG00000012399	SUB1	100	74.016	Equus_caballus
ENSACLG00000016875	sub1b	51	73.267	ENSEEUG00000000436	SUB1	99	75.490	Erinaceus_europaeus
ENSACLG00000016875	sub1b	64	69.291	ENSFCAG00000037288	SUB1	100	73.228	Felis_catus
ENSACLG00000016875	sub1b	64	73.228	ENSFALG00000002143	SUB1	88	74.016	Ficedula_albicollis
ENSACLG00000016875	sub1b	64	70.079	ENSFDAG00000017179	SUB1	100	74.016	Fukomys_damarensis
ENSACLG00000016875	sub1b	64	45.238	ENSGALG00000027147	-	100	45.238	Gallus_gallus
ENSACLG00000016875	sub1b	64	74.603	ENSGALG00000003248	SUB1	100	75.397	Gallus_gallus
ENSACLG00000016875	sub1b	64	72.222	ENSGALG00000034905	-	100	73.016	Gallus_gallus
ENSACLG00000016875	sub1b	64	92.800	ENSGACG00000003912	sub1b	100	92.800	Gasterosteus_aculeatus
ENSACLG00000016875	sub1b	64	74.603	ENSGAGG00000013535	SUB1	100	75.397	Gopherus_agassizii
ENSACLG00000016875	sub1b	64	70.079	ENSGGOG00000040900	SUB1	100	74.016	Gorilla_gorilla
ENSACLG00000016875	sub1b	53	99.038	ENSHBUG00000013953	sub1b	78	99.038	Haplochromis_burtoni
ENSACLG00000016875	sub1b	64	70.079	ENSHGLG00000006749	SUB1	100	74.016	Heterocephalus_glaber_female
ENSACLG00000016875	sub1b	64	70.079	ENSHGLG00100014344	SUB1	100	74.016	Heterocephalus_glaber_male
ENSACLG00000016875	sub1b	64	88.800	ENSHCOG00000001809	sub1b	100	88.800	Hippocampus_comes
ENSACLG00000016875	sub1b	64	78.125	ENSIPUG00000024367	SUB1	100	78.125	Ictalurus_punctatus
ENSACLG00000016875	sub1b	64	81.600	ENSIPUG00000008166	sub1	100	81.600	Ictalurus_punctatus
ENSACLG00000016875	sub1b	64	70.866	ENSSTOG00000019364	SUB1	100	74.803	Ictidomys_tridecemlineatus
ENSACLG00000016875	sub1b	64	68.504	ENSJJAG00000018885	Sub1	100	71.654	Jaculus_jaculus
ENSACLG00000016875	sub1b	63	91.129	ENSLBEG00000010728	sub1b	100	90.400	Labrus_bergylta
ENSACLG00000016875	sub1b	64	83.333	ENSLOCG00000006692	sub1b	100	83.200	Lepisosteus_oculatus
ENSACLG00000016875	sub1b	64	70.079	ENSLAFG00000011006	-	100	74.016	Loxodonta_africana
ENSACLG00000016875	sub1b	64	70.079	ENSLAFG00000032088	-	100	74.016	Loxodonta_africana
ENSACLG00000016875	sub1b	64	70.079	ENSMFAG00000040728	SUB1	100	74.016	Macaca_fascicularis
ENSACLG00000016875	sub1b	64	62.205	ENSMFAG00000045643	-	61	65.354	Macaca_fascicularis
ENSACLG00000016875	sub1b	64	70.079	ENSMMUG00000046181	SUB1	100	74.016	Macaca_mulatta
ENSACLG00000016875	sub1b	64	70.079	ENSMNEG00000037046	SUB1	100	74.016	Macaca_nemestrina
ENSACLG00000016875	sub1b	64	68.504	ENSMLEG00000030509	-	94	71.654	Mandrillus_leucophaeus
ENSACLG00000016875	sub1b	64	70.079	ENSMLEG00000037017	-	100	74.016	Mandrillus_leucophaeus
ENSACLG00000016875	sub1b	69	54.015	ENSMLEG00000043436	-	94	57.664	Mandrillus_leucophaeus
ENSACLG00000016875	sub1b	64	96.000	ENSMAMG00000018428	sub1b	100	96.000	Mastacembelus_armatus
ENSACLG00000016875	sub1b	64	100.000	ENSMZEG00005021252	sub1b	100	100.000	Maylandia_zebra
ENSACLG00000016875	sub1b	64	74.603	ENSMGAG00000002906	SUB1	100	75.397	Meleagris_gallopavo
ENSACLG00000016875	sub1b	64	68.504	ENSMAUG00000020232	Sub1	100	72.441	Mesocricetus_auratus
ENSACLG00000016875	sub1b	64	70.079	ENSMICG00000014535	SUB1	100	74.016	Microcebus_murinus
ENSACLG00000016875	sub1b	64	67.717	ENSMOCG00000018930	-	100	71.654	Microtus_ochrogaster
ENSACLG00000016875	sub1b	64	60.630	ENSMOCG00000016424	-	100	63.780	Microtus_ochrogaster
ENSACLG00000016875	sub1b	53	76.923	ENSMODG00000020410	SUB1	75	76.923	Monodelphis_domestica
ENSACLG00000016875	sub1b	64	95.238	ENSMALG00000007163	sub1b	82	95.238	Monopterus_albus
ENSACLG00000016875	sub1b	64	68.504	MGP_CAROLIEiJ_G0019676	Sub1	100	72.441	Mus_caroli
ENSACLG00000016875	sub1b	64	68.504	ENSMUSG00000022205	Sub1	100	72.441	Mus_musculus
ENSACLG00000016875	sub1b	64	67.717	MGP_PahariEiJ_G0016056	Sub1	100	71.654	Mus_pahari
ENSACLG00000016875	sub1b	64	68.504	MGP_SPRETEiJ_G0020573	Sub1	100	72.441	Mus_spretus
ENSACLG00000016875	sub1b	64	68.504	ENSMPUG00000018418	-	100	72.441	Mustela_putorius_furo
ENSACLG00000016875	sub1b	64	69.291	ENSMPUG00000015185	-	100	73.228	Mustela_putorius_furo
ENSACLG00000016875	sub1b	64	69.531	ENSMLUG00000013685	-	96	73.438	Myotis_lucifugus
ENSACLG00000016875	sub1b	64	66.142	ENSMLUG00000009236	-	95	66.142	Myotis_lucifugus
ENSACLG00000016875	sub1b	64	61.905	ENSNGAG00000017212	-	100	60.000	Nannospalax_galili
ENSACLG00000016875	sub1b	64	69.291	ENSNGAG00000014072	-	100	73.228	Nannospalax_galili
ENSACLG00000016875	sub1b	64	66.667	ENSNGAG00000010782	-	84	69.841	Nannospalax_galili
ENSACLG00000016875	sub1b	53	98.077	ENSNBRG00000008451	sub1b	85	98.077	Neolamprologus_brichardi
ENSACLG00000016875	sub1b	64	65.873	ENSNLEG00000035968	-	100	69.841	Nomascus_leucogenys
ENSACLG00000016875	sub1b	64	69.291	ENSNLEG00000018383	-	95	73.228	Nomascus_leucogenys
ENSACLG00000016875	sub1b	64	69.291	ENSNLEG00000036068	SUB1	100	73.228	Nomascus_leucogenys
ENSACLG00000016875	sub1b	64	71.429	ENSMEUG00000007770	SUB1	100	75.397	Notamacropus_eugenii
ENSACLG00000016875	sub1b	64	68.504	ENSOPRG00000012887	SUB1	100	71.654	Ochotona_princeps
ENSACLG00000016875	sub1b	64	70.079	ENSODEG00000001937	-	100	74.016	Octodon_degus
ENSACLG00000016875	sub1b	55	72.222	ENSODEG00000014558	-	72	72.222	Octodon_degus
ENSACLG00000016875	sub1b	55	71.296	ENSODEG00000015114	-	87	71.296	Octodon_degus
ENSACLG00000016875	sub1b	64	74.016	ENSOANG00000002328	SUB1	95	77.953	Ornithorhynchus_anatinus
ENSACLG00000016875	sub1b	64	67.717	ENSOCUG00000006262	SUB1	60	67.717	Oryctolagus_cuniculus
ENSACLG00000016875	sub1b	62	70.968	ENSOGAG00000000337	-	100	75.000	Otolemur_garnettii
ENSACLG00000016875	sub1b	64	70.079	ENSOGAG00000009012	-	100	74.016	Otolemur_garnettii
ENSACLG00000016875	sub1b	64	70.079	ENSOARG00000012154	SUB1	100	74.016	Ovis_aries
ENSACLG00000016875	sub1b	64	70.079	ENSPPAG00000011212	SUB1	100	74.016	Pan_paniscus
ENSACLG00000016875	sub1b	64	69.291	ENSPPRG00000008557	SUB1	100	73.228	Panthera_pardus
ENSACLG00000016875	sub1b	64	69.291	ENSPTIG00000009466	SUB1	100	73.228	Panthera_tigris_altaica
ENSACLG00000016875	sub1b	64	70.079	ENSPTRG00000048895	SUB1	100	74.016	Pan_troglodytes
ENSACLG00000016875	sub1b	64	64.567	ENSPTRG00000041644	-	100	68.504	Pan_troglodytes
ENSACLG00000016875	sub1b	69	57.664	ENSPANG00000033272	-	94	57.664	Papio_anubis
ENSACLG00000016875	sub1b	64	70.079	ENSPANG00000000339	-	97	74.016	Papio_anubis
ENSACLG00000016875	sub1b	64	70.312	ENSPANG00000002644	-	96	74.219	Papio_anubis
ENSACLG00000016875	sub1b	64	68.504	ENSPANG00000000672	-	91	71.654	Papio_anubis
ENSACLG00000016875	sub1b	64	68.254	ENSPANG00000035601	-	100	70.635	Papio_anubis
ENSACLG00000016875	sub1b	64	80.800	ENSPKIG00000016923	sub1b	100	80.800	Paramormyrops_kingsleyae
ENSACLG00000016875	sub1b	64	73.016	ENSPSIG00000005731	SUB1	95	73.810	Pelodiscus_sinensis
ENSACLG00000016875	sub1b	64	69.048	ENSPCIG00000020827	-	100	65.873	Phascolarctos_cinereus
ENSACLG00000016875	sub1b	64	71.429	ENSPCIG00000020907	-	100	75.397	Phascolarctos_cinereus
ENSACLG00000016875	sub1b	64	66.929	ENSPPYG00000018347	-	100	70.866	Pongo_abelii
ENSACLG00000016875	sub1b	64	70.079	ENSPPYG00000015379	SUB1	100	74.016	Pongo_abelii
ENSACLG00000016875	sub1b	64	70.079	ENSPCOG00000014391	SUB1	100	74.016	Propithecus_coquereli
ENSACLG00000016875	sub1b	64	69.291	ENSPVAG00000004785	SUB1	100	73.228	Pteropus_vampyrus
ENSACLG00000016875	sub1b	64	100.000	ENSPNYG00000010975	sub1b	100	100.000	Pundamilia_nyererei
ENSACLG00000016875	sub1b	64	72.222	ENSPNAG00000008693	sub1a	100	78.571	Pygocentrus_nattereri
ENSACLG00000016875	sub1b	63	85.484	ENSPNAG00000005998	sub1b	99	85.484	Pygocentrus_nattereri
ENSACLG00000016875	sub1b	64	69.291	ENSRNOG00000050563	Sub1	100	73.228	Rattus_norvegicus
ENSACLG00000016875	sub1b	64	66.667	ENSRBIG00000031233	SUB1	100	69.048	Rhinopithecus_bieti
ENSACLG00000016875	sub1b	69	61.314	ENSRROG00000042718	-	95	64.964	Rhinopithecus_roxellana
ENSACLG00000016875	sub1b	64	70.079	ENSRROG00000040438	SUB1	100	74.016	Rhinopithecus_roxellana
ENSACLG00000016875	sub1b	64	70.079	ENSSBOG00000026994	SUB1	100	74.016	Saimiri_boliviensis_boliviensis
ENSACLG00000016875	sub1b	64	71.429	ENSSHAG00000014986	SUB1	100	75.397	Sarcophilus_harrisii
ENSACLG00000016875	sub1b	64	80.800	ENSSFOG00015017283	sub1b	100	80.800	Scleropages_formosus
ENSACLG00000016875	sub1b	64	78.740	ENSSFOG00015018386	sub1b	100	80.315	Scleropages_formosus
ENSACLG00000016875	sub1b	64	93.600	ENSSMAG00000000313	sub1b	100	93.600	Scophthalmus_maximus
ENSACLG00000016875	sub1b	64	96.800	ENSSDUG00000013854	sub1b	76	96.800	Seriola_dumerili
ENSACLG00000016875	sub1b	64	96.800	ENSSLDG00000000852	sub1b	100	96.800	Seriola_lalandi_dorsalis
ENSACLG00000016875	sub1b	64	73.016	ENSSPUG00000016817	SUB1	100	73.810	Sphenodon_punctatus
ENSACLG00000016875	sub1b	64	97.600	ENSSPAG00000019363	sub1b	100	97.600	Stegastes_partitus
ENSACLG00000016875	sub1b	64	70.079	ENSSSCG00000032650	-	100	74.016	Sus_scrofa
ENSACLG00000016875	sub1b	64	70.079	ENSSSCG00000040294	-	87	74.016	Sus_scrofa
ENSACLG00000016875	sub1b	64	72.222	ENSTGUG00000001918	SUB1	100	73.016	Taeniopygia_guttata
ENSACLG00000016875	sub1b	64	91.200	ENSTRUG00000024420	sub1b	100	91.200	Takifugu_rubripes
ENSACLG00000016875	sub1b	64	88.800	ENSTNIG00000002700	sub1b	100	88.800	Tetraodon_nigroviridis
ENSACLG00000016875	sub1b	64	71.654	ENSTBEG00000012861	-	100	69.291	Tupaia_belangeri
ENSACLG00000016875	sub1b	64	72.441	ENSTBEG00000011247	-	99	70.866	Tupaia_belangeri
ENSACLG00000016875	sub1b	64	69.291	ENSTBEG00000001790	-	100	68.504	Tupaia_belangeri
ENSACLG00000016875	sub1b	64	69.291	ENSTBEG00000006504	-	100	73.228	Tupaia_belangeri
ENSACLG00000016875	sub1b	63	63.492	ENSTBEG00000015821	-	100	67.460	Tupaia_belangeri
ENSACLG00000016875	sub1b	64	69.291	ENSTBEG00000004053	-	100	73.228	Tupaia_belangeri
ENSACLG00000016875	sub1b	52	75.490	ENSTTRG00000017324	SUB1	99	75.490	Tursiops_truncatus
ENSACLG00000016875	sub1b	64	69.291	ENSUAMG00000000182	SUB1	100	73.228	Ursus_americanus
ENSACLG00000016875	sub1b	64	69.291	ENSUMAG00000013792	SUB1	100	73.228	Ursus_maritimus
ENSACLG00000016875	sub1b	64	63.492	ENSVPAG00000011012	SUB1	100	67.460	Vicugna_pacos
ENSACLG00000016875	sub1b	64	69.291	ENSVVUG00000022166	-	100	73.228	Vulpes_vulpes
ENSACLG00000016875	sub1b	57	62.832	ENSVVUG00000025193	-	95	67.257	Vulpes_vulpes
ENSACLG00000016875	sub1b	64	68.750	ENSXETG00000027218	sub1	100	72.656	Xenopus_tropicalis