EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000016899 (Gene tree)
Gene ID: 113025651
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 67862 bases
Position: chr1:29660991-29728852
Accession: ZDB-GENE-030131-497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000024966	ResIII	PF04851.15	2.6e-06	1	1
ENSACLP00000024966	BRK	PF07533.16	1e-31	1	2
ENSACLP00000024966	BRK	PF07533.16	1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000025566	-	8631	-	ENSACLP00000024966	2876 (aa)	-	-

Gene Model

Click here to download ENSACLG00000016899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000016899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000016899	chd9	63	59.744	ENSACLG00000019692	chd8	76	62.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000016899	chd9	99	61.687	ENSG00000177200	CHD9	91	77.778	Homo_sapiens
ENSACLG00000016899	chd9	99	85.538	ENSAPOG00000023034	chd9	98	89.299	Acanthochromis_polyacanthus
ENSACLG00000016899	chd9	73	63.438	ENSAMEG00000016232	CHD9	79	70.737	Ailuropoda_melanoleuca
ENSACLG00000016899	chd9	99	88.881	ENSACIG00000004097	chd9	98	88.889	Amphilophus_citrinellus
ENSACLG00000016899	chd9	99	87.967	ENSAOCG00000005487	chd9	98	89.437	Amphiprion_ocellaris
ENSACLG00000016899	chd9	99	87.930	ENSAPEG00000009859	chd9	98	89.380	Amphiprion_percula
ENSACLG00000016899	chd9	99	84.442	ENSATEG00000002748	chd9	99	84.437	Anabas_testudineus
ENSACLG00000016899	chd9	73	63.864	ENSACAG00000016150	CHD9	78	70.603	Anolis_carolinensis
ENSACLG00000016899	chd9	99	61.440	ENSANAG00000015630	CHD9	92	68.881	Aotus_nancymaae
ENSACLG00000016899	chd9	99	69.467	ENSAMXG00000005652	chd9	98	75.081	Astyanax_mexicanus
ENSACLG00000016899	chd9	73	62.892	ENSBTAG00000002287	CHD9	79	70.178	Bos_taurus
ENSACLG00000016899	chd9	99	61.637	ENSCJAG00000001573	CHD9	92	69.231	Callithrix_jacchus
ENSACLG00000016899	chd9	73	63.029	ENSCAFG00000009699	CHD9	84	70.712	Canis_familiaris
ENSACLG00000016899	chd9	73	63.029	ENSCAFG00020002879	CHD9	92	68.836	Canis_lupus_dingo
ENSACLG00000016899	chd9	73	63.041	ENSTSYG00000007693	CHD9	92	68.836	Carlito_syrichta
ENSACLG00000016899	chd9	67	54.812	ENSCAPG00000011604	CHD9	56	61.322	Cavia_aperea
ENSACLG00000016899	chd9	73	59.653	ENSCPOG00000036544	CHD9	92	67.217	Cavia_porcellus
ENSACLG00000016899	chd9	99	61.726	ENSCCAG00000036178	CHD9	92	69.825	Cebus_capucinus
ENSACLG00000016899	chd9	73	63.503	ENSCATG00000036753	CHD9	91	69.930	Cercocebus_atys
ENSACLG00000016899	chd9	73	63.064	ENSCLAG00000007137	CHD9	94	80.072	Chinchilla_lanigera
ENSACLG00000016899	chd9	73	63.449	ENSCSAG00000005311	CHD9	79	70.266	Chlorocebus_sabaeus
ENSACLG00000016899	chd9	71	82.692	ENSCHOG00000003935	CHD9	55	91.099	Choloepus_hoffmanni
ENSACLG00000016899	chd9	89	83.333	ENSCPBG00000012459	CHD9	85	78.761	Chrysemys_picta_bellii
ENSACLG00000016899	chd9	73	63.507	ENSCANG00000030349	CHD9	92	69.930	Colobus_angolensis_palliatus
ENSACLG00000016899	chd9	99	61.263	ENSCGRG00000012850	Chd9	94	80.024	Cricetulus_griseus_crigri
ENSACLG00000016899	chd9	94	79.736	ENSCSEG00000009209	chd9	98	81.504	Cynoglossus_semilaevis
ENSACLG00000016899	chd9	97	80.701	ENSCVAG00000016195	chd9	99	79.979	Cyprinodon_variegatus
ENSACLG00000016899	chd9	82	75.247	ENSDARG00000074498	chd9	98	74.325	Danio_rerio
ENSACLG00000016899	chd9	81	69.234	ENSDNOG00000006045	CHD9	94	71.046	Dasypus_novemcinctus
ENSACLG00000016899	chd9	64	90.476	ENSETEG00000009565	CHD9	76	90.476	Echinops_telfairi
ENSACLG00000016899	chd9	86	78.581	ENSEASG00005014832	CHD9	95	78.664	Equus_asinus_asinus
ENSACLG00000016899	chd9	73	62.983	ENSECAG00000011505	CHD9	91	70.640	Equus_caballus
ENSACLG00000016899	chd9	79	86.344	ENSEEUG00000014515	CHD9	70	86.344	Erinaceus_europaeus
ENSACLG00000016899	chd9	92	78.506	ENSELUG00000006031	chd9	98	77.632	Esox_lucius
ENSACLG00000016899	chd9	99	61.477	ENSFCAG00000022534	CHD9	92	69.178	Felis_catus
ENSACLG00000016899	chd9	84	69.030	ENSFALG00000013276	CHD9	95	71.302	Ficedula_albicollis
ENSACLG00000016899	chd9	99	82.295	ENSFHEG00000006068	chd9	98	85.378	Fundulus_heteroclitus
ENSACLG00000016899	chd9	68	85.356	ENSGMOG00000006040	chd9	83	85.288	Gadus_morhua
ENSACLG00000016899	chd9	95	62.976	ENSGALG00000039178	CHD9	80	71.583	Gallus_gallus
ENSACLG00000016899	chd9	99	80.556	ENSGAFG00000010014	chd9	98	86.596	Gambusia_affinis
ENSACLG00000016899	chd9	83	84.114	ENSGACG00000016694	chd9	97	88.841	Gasterosteus_aculeatus
ENSACLG00000016899	chd9	73	63.462	ENSGGOG00000014816	CHD9	92	69.580	Gorilla_gorilla
ENSACLG00000016899	chd9	100	96.076	ENSHBUG00000023322	chd9	99	100.000	Haplochromis_burtoni
ENSACLG00000016899	chd9	99	61.287	ENSHGLG00000014938	CHD9	96	78.673	Heterocephalus_glaber_female
ENSACLG00000016899	chd9	97	75.462	ENSHCOG00000000937	chd9	97	81.162	Hippocampus_comes
ENSACLG00000016899	chd9	84	76.121	ENSIPUG00000016448	chd9	97	80.488	Ictalurus_punctatus
ENSACLG00000016899	chd9	99	61.515	ENSSTOG00000022273	CHD9	94	80.000	Ictidomys_tridecemlineatus
ENSACLG00000016899	chd9	69	69.695	ENSJJAG00000015741	-	96	71.262	Jaculus_jaculus
ENSACLG00000016899	chd9	97	81.474	ENSKMAG00000016784	chd9	98	85.755	Kryptolebias_marmoratus
ENSACLG00000016899	chd9	94	82.998	ENSLBEG00000012077	chd9	98	85.910	Labrus_bergylta
ENSACLG00000016899	chd9	99	58.749	ENSLACG00000005557	CHD9	79	66.260	Latimeria_chalumnae
ENSACLG00000016899	chd9	98	67.952	ENSLOCG00000007225	chd9	96	76.284	Lepisosteus_oculatus
ENSACLG00000016899	chd9	73	62.722	ENSLAFG00000015374	CHD9	79	69.798	Loxodonta_africana
ENSACLG00000016899	chd9	79	69.835	ENSMFAG00000041354	CHD9	93	70.655	Macaca_fascicularis
ENSACLG00000016899	chd9	73	63.449	ENSMMUG00000016310	CHD9	92	69.930	Macaca_mulatta
ENSACLG00000016899	chd9	89	62.687	ENSMNEG00000031494	CHD9	80	72.009	Macaca_nemestrina
ENSACLG00000016899	chd9	73	63.553	ENSMLEG00000043219	CHD9	92	69.930	Mandrillus_leucophaeus
ENSACLG00000016899	chd9	99	83.414	ENSMAMG00000003909	chd9	99	83.403	Mastacembelus_armatus
ENSACLG00000016899	chd9	100	93.922	ENSMZEG00005006581	chd9	99	96.628	Maylandia_zebra
ENSACLG00000016899	chd9	90	60.854	ENSMGAG00000004642	CHD9	59	71.843	Meleagris_gallopavo
ENSACLG00000016899	chd9	73	63.329	ENSMICG00000016679	CHD9	92	69.178	Microcebus_murinus
ENSACLG00000016899	chd9	73	83.333	ENSMMOG00000016406	chd9	99	81.136	Mola_mola
ENSACLG00000016899	chd9	73	65.969	ENSMODG00000013142	-	95	77.896	Monodelphis_domestica
ENSACLG00000016899	chd9	99	83.448	ENSMALG00000013306	chd9	99	82.933	Monopterus_albus
ENSACLG00000016899	chd9	73	62.529	ENSMUSG00000056608	Chd9	94	79.036	Mus_musculus
ENSACLG00000016899	chd9	73	62.546	MGP_PahariEiJ_G0022964	Chd9	79	69.244	Mus_pahari
ENSACLG00000016899	chd9	73	63.280	ENSMPUG00000003285	CHD9	80	69.701	Mustela_putorius_furo
ENSACLG00000016899	chd9	73	62.705	ENSMLUG00000004456	CHD9	79	69.975	Myotis_lucifugus
ENSACLG00000016899	chd9	99	99.419	ENSNBRG00000009423	chd9	99	98.330	Neolamprologus_brichardi
ENSACLG00000016899	chd9	73	63.599	ENSNLEG00000001026	CHD9	80	72.118	Nomascus_leucogenys
ENSACLG00000016899	chd9	67	93.985	ENSMEUG00000008222	-	77	89.809	Notamacropus_eugenii
ENSACLG00000016899	chd9	55	93.985	ENSOPRG00000011168	CHD9	72	86.197	Ochotona_princeps
ENSACLG00000016899	chd9	83	100.000	ENSONIG00000002816	chd9	100	94.113	Oreochromis_niloticus
ENSACLG00000016899	chd9	61	72.682	ENSOANG00000013401	CHD9	79	71.199	Ornithorhynchus_anatinus
ENSACLG00000016899	chd9	58	74.232	ENSOCUG00000001016	CHD9	94	70.290	Oryctolagus_cuniculus
ENSACLG00000016899	chd9	97	77.763	ENSORLG00000013810	chd9	97	83.408	Oryzias_latipes
ENSACLG00000016899	chd9	98	77.966	ENSORLG00020020665	chd9	98	78.097	Oryzias_latipes_hni
ENSACLG00000016899	chd9	98	78.050	ENSORLG00015019126	chd9	97	84.587	Oryzias_latipes_hsok
ENSACLG00000016899	chd9	63	81.374	ENSOMEG00000015978	chd9	99	81.364	Oryzias_melastigma
ENSACLG00000016899	chd9	99	61.222	ENSOGAG00000002110	CHD9	79	69.744	Otolemur_garnettii
ENSACLG00000016899	chd9	73	62.659	ENSOARG00000017664	CHD9	79	69.777	Ovis_aries
ENSACLG00000016899	chd9	83	67.875	ENSPPAG00000039388	-	96	69.331	Pan_paniscus
ENSACLG00000016899	chd9	99	61.510	ENSPPRG00000004801	CHD9	91	69.930	Panthera_pardus
ENSACLG00000016899	chd9	99	60.604	ENSPTIG00000021854	CHD9	91	61.538	Panthera_tigris_altaica
ENSACLG00000016899	chd9	73	63.462	ENSPTRG00000008113	CHD9	92	69.580	Pan_troglodytes
ENSACLG00000016899	chd9	85	67.033	ENSPANG00000019307	CHD9	96	70.004	Papio_anubis
ENSACLG00000016899	chd9	98	63.449	ENSPKIG00000025401	-	97	64.029	Paramormyrops_kingsleyae
ENSACLG00000016899	chd9	96	68.579	ENSPKIG00000021876	chd9	95	77.811	Paramormyrops_kingsleyae
ENSACLG00000016899	chd9	64	62.578	ENSPSIG00000008099	CHD9	71	77.647	Pelodiscus_sinensis
ENSACLG00000016899	chd9	86	63.155	ENSPCIG00000017215	CHD9	94	76.431	Phascolarctos_cinereus
ENSACLG00000016899	chd9	99	80.335	ENSPFOG00000015839	chd9	99	80.362	Poecilia_formosa
ENSACLG00000016899	chd9	99	83.753	ENSPLAG00000011118	chd9	98	87.094	Poecilia_latipinna
ENSACLG00000016899	chd9	99	79.721	ENSPMEG00000015106	chd9	99	80.144	Poecilia_mexicana
ENSACLG00000016899	chd9	97	81.024	ENSPREG00000006473	chd9	98	86.428	Poecilia_reticulata
ENSACLG00000016899	chd9	73	63.507	ENSPPYG00000007348	CHD9	80	70.063	Pongo_abelii
ENSACLG00000016899	chd9	73	78.410	ENSPCAG00000007564	CHD9	73	80.488	Procavia_capensis
ENSACLG00000016899	chd9	73	61.493	ENSPCOG00000028433	CHD9	91	69.231	Propithecus_coquereli
ENSACLG00000016899	chd9	83	58.804	ENSPVAG00000015617	CHD9	76	73.132	Pteropus_vampyrus
ENSACLG00000016899	chd9	100	99.376	ENSPNYG00000010947	chd9	100	99.376	Pundamilia_nyererei
ENSACLG00000016899	chd9	99	69.400	ENSPNAG00000024141	chd9	98	75.882	Pygocentrus_nattereri
ENSACLG00000016899	chd9	73	60.657	ENSRNOG00000049302	Chd9	88	79.737	Rattus_norvegicus
ENSACLG00000016899	chd9	83	68.618	ENSRBIG00000035553	CHD9	96	70.046	Rhinopithecus_bieti
ENSACLG00000016899	chd9	82	69.399	ENSRROG00000033278	CHD9	97	70.059	Rhinopithecus_roxellana
ENSACLG00000016899	chd9	99	61.367	ENSSBOG00000030240	CHD9	92	69.231	Saimiri_boliviensis_boliviensis
ENSACLG00000016899	chd9	97	69.128	ENSSFOG00015020209	chd9	98	75.898	Scleropages_formosus
ENSACLG00000016899	chd9	99	66.132	ENSSFOG00015001327	chd9	95	74.029	Scleropages_formosus
ENSACLG00000016899	chd9	96	85.192	ENSSMAG00000008953	chd9	98	87.343	Scophthalmus_maximus
ENSACLG00000016899	chd9	99	86.919	ENSSDUG00000006139	chd9	98	89.784	Seriola_dumerili
ENSACLG00000016899	chd9	99	86.590	ENSSLDG00000017818	chd9	98	89.397	Seriola_lalandi_dorsalis
ENSACLG00000016899	chd9	94	86.565	ENSSPAG00000021649	chd9	98	89.789	Stegastes_partitus
ENSACLG00000016899	chd9	99	80.124	ENSTRUG00000009125	chd9	99	80.667	Takifugu_rubripes
ENSACLG00000016899	chd9	57	87.081	ENSTNIG00000003825	chd9	87	87.081	Tetraodon_nigroviridis
ENSACLG00000016899	chd9	73	62.938	ENSTTRG00000012674	CHD9	72	70.960	Tursiops_truncatus
ENSACLG00000016899	chd9	66	85.893	ENSUMAG00000004043	CHD9	91	86.681	Ursus_maritimus
ENSACLG00000016899	chd9	70	75.836	ENSVPAG00000001374	CHD9	76	69.921	Vicugna_pacos
ENSACLG00000016899	chd9	73	62.983	ENSVVUG00000019435	CHD9	84	70.712	Vulpes_vulpes
ENSACLG00000016899	chd9	99	58.701	ENSXETG00000000349	chd9	78	74.970	Xenopus_tropicalis
ENSACLG00000016899	chd9	84	87.020	ENSXCOG00000012997	chd9	99	87.143	Xiphophorus_couchianus
ENSACLG00000016899	chd9	99	80.013	ENSXMAG00000016192	chd9	99	86.278	Xiphophorus_maculatus