EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000016922 (Gene tree)
Gene ID: 113013857
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 32776 bases
Position: chr20:21352627-21385402
Accession: 113013857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000024915	RRM_5	PF13893.6	6.7e-08	1	2
ENSACLP00000024915	RRM_5	PF13893.6	6.7e-08	2	2
ENSACLP00000024860	RRM_5	PF13893.6	4.8e-07	1	2
ENSACLP00000024860	RRM_5	PF13893.6	4.8e-07	2	2
ENSACLP00000024915	RRM_1	PF00076.22	3.8e-41	1	3
ENSACLP00000024915	RRM_1	PF00076.22	3.8e-41	2	3
ENSACLP00000024915	RRM_1	PF00076.22	3.8e-41	3	3
ENSACLP00000024860	RRM_1	PF00076.22	4.2e-27	1	2
ENSACLP00000024860	RRM_1	PF00076.22	4.2e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000025460	-	14872	-	ENSACLP00000024860	3469 (aa)	-	-
ENSACLT00000025513	-	14938	-	ENSACLP00000024915	3537 (aa)	XP_026010848	UPI000E40F145

Gene Model

Click here to download ENSACLG00000016922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000016922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000016922	-	95	84.024	ENSACLG00000021433	si:ch1073-335m2.2	99	84.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000016922	-	92	48.330	ENSG00000065526	SPEN	85	90.476	Homo_sapiens
ENSACLG00000016922	-	100	84.613	ENSAPOG00000009853	-	100	84.581	Acanthochromis_polyacanthus
ENSACLG00000016922	-	97	78.378	ENSAPOG00000011411	si:ch1073-335m2.2	99	78.378	Acanthochromis_polyacanthus
ENSACLG00000016922	-	69	56.898	ENSAMEG00000011817	SPEN	96	80.337	Ailuropoda_melanoleuca
ENSACLG00000016922	-	100	84.581	ENSAOCG00000014505	-	100	84.436	Amphiprion_ocellaris
ENSACLG00000016922	-	100	84.557	ENSAPEG00000010288	-	100	84.412	Amphiprion_percula
ENSACLG00000016922	-	95	76.042	ENSAPEG00000013515	si:ch1073-335m2.2	98	76.042	Amphiprion_percula
ENSACLG00000016922	-	97	78.378	ENSATEG00000007674	si:ch1073-335m2.2	99	78.378	Anabas_testudineus
ENSACLG00000016922	-	100	80.966	ENSATEG00000005627	-	100	80.994	Anabas_testudineus
ENSACLG00000016922	-	100	46.379	ENSAPLG00000012618	SPEN	99	78.146	Anas_platyrhynchos
ENSACLG00000016922	-	99	44.892	ENSANAG00000034428	SPEN	96	72.093	Aotus_nancymaae
ENSACLG00000016922	-	100	55.283	ENSAMXG00000012485	spen	100	55.568	Astyanax_mexicanus
ENSACLG00000016922	-	99	45.787	ENSBTAG00000018729	SPEN	97	80.337	Bos_taurus
ENSACLG00000016922	-	98	49.490	ENSCJAG00000008527	SPEN	96	81.461	Callithrix_jacchus
ENSACLG00000016922	-	87	52.339	ENSCAFG00000016132	-	92	81.461	Canis_familiaris
ENSACLG00000016922	-	99	45.562	ENSCHIG00000025070	SPEN	96	81.461	Capra_hircus
ENSACLG00000016922	-	82	45.416	ENSTSYG00000036016	SPEN	86	46.604	Carlito_syrichta
ENSACLG00000016922	-	94	74.163	ENSCAPG00000013803	SPEN	97	45.438	Cavia_aperea
ENSACLG00000016922	-	94	74.163	ENSCPOG00000014036	SPEN	96	45.761	Cavia_porcellus
ENSACLG00000016922	-	99	41.001	ENSCCAG00000020258	SPEN	86	81.461	Cebus_capucinus
ENSACLG00000016922	-	78	87.407	ENSCATG00000015079	SPEN	93	81.461	Cercocebus_atys
ENSACLG00000016922	-	84	66.397	ENSCLAG00000002018	SPEN	85	66.397	Chinchilla_lanigera
ENSACLG00000016922	-	100	46.863	ENSCPBG00000010477	SPEN	99	81.461	Chrysemys_picta_bellii
ENSACLG00000016922	-	90	46.871	ENSCANG00000034547	SPEN	91	72.093	Colobus_angolensis_palliatus
ENSACLG00000016922	-	88	48.277	ENSCGRG00001007725	Spen	97	82.022	Cricetulus_griseus_chok1gshd
ENSACLG00000016922	-	88	46.647	ENSCGRG00000010581	Spen	97	78.667	Cricetulus_griseus_crigri
ENSACLG00000016922	-	99	76.713	ENSCSEG00000003915	-	100	76.713	Cynoglossus_semilaevis
ENSACLG00000016922	-	100	75.352	ENSCVAG00000016346	-	100	75.295	Cyprinodon_variegatus
ENSACLG00000016922	-	97	78.378	ENSCVAG00000009075	si:ch1073-335m2.2	99	78.378	Cyprinodon_variegatus
ENSACLG00000016922	-	100	53.552	ENSDARG00000074245	spen	100	91.852	Danio_rerio
ENSACLG00000016922	-	100	41.557	ENSDARG00000074332	si:ch1073-335m2.2	100	46.362	Danio_rerio
ENSACLG00000016922	-	99	46.181	ENSDNOG00000041948	SPEN	86	82.022	Dasypus_novemcinctus
ENSACLG00000016922	-	90	45.962	ENSDORG00000023909	Spen	91	77.241	Dipodomys_ordii
ENSACLG00000016922	-	94	87.500	ENSEASG00005015911	SPEN	96	81.461	Equus_asinus_asinus
ENSACLG00000016922	-	94	87.500	ENSECAG00000008833	SPEN	96	81.461	Equus_caballus
ENSACLG00000016922	-	56	88.372	ENSEEUG00000010255	SPEN	58	88.372	Erinaceus_europaeus
ENSACLG00000016922	-	97	82.778	ENSELUG00000007726	si:ch1073-335m2.2	98	82.778	Esox_lucius
ENSACLG00000016922	-	89	45.086	ENSFALG00000003551	SPEN	100	44.827	Ficedula_albicollis
ENSACLG00000016922	-	89	46.491	ENSFDAG00000010212	SPEN	88	46.932	Fukomys_damarensis
ENSACLG00000016922	-	97	72.947	ENSFHEG00000004544	si:ch1073-335m2.2	99	72.947	Fundulus_heteroclitus
ENSACLG00000016922	-	97	88.043	ENSGMOG00000008397	-	98	89.385	Gadus_morhua
ENSACLG00000016922	-	95	72.816	ENSGMOG00000008156	si:ch1073-335m2.2	98	72.816	Gadus_morhua
ENSACLG00000016922	-	100	47.870	ENSGALG00000036932	SPEN	99	81.461	Gallus_gallus
ENSACLG00000016922	-	100	76.893	ENSGAFG00000015819	-	88	94.382	Gambusia_affinis
ENSACLG00000016922	-	100	75.217	ENSGACG00000005341	-	100	75.105	Gasterosteus_aculeatus
ENSACLG00000016922	-	100	42.340	ENSGACG00000001176	si:ch1073-335m2.2	100	42.112	Gasterosteus_aculeatus
ENSACLG00000016922	-	100	48.083	ENSGAGG00000020785	SPEN	99	81.461	Gopherus_agassizii
ENSACLG00000016922	-	89	49.169	ENSGGOG00000012041	SPEN	96	81.461	Gorilla_gorilla
ENSACLG00000016922	-	92	84.024	ENSHBUG00000023253	si:ch1073-335m2.2	99	84.024	Haplochromis_burtoni
ENSACLG00000016922	-	100	99.519	ENSHBUG00000020626	-	100	99.519	Haplochromis_burtoni
ENSACLG00000016922	-	80	67.206	ENSHGLG00000019259	SPEN	80	67.206	Heterocephalus_glaber_female
ENSACLG00000016922	-	68	67.206	ENSHGLG00100019294	SPEN	79	67.206	Heterocephalus_glaber_male
ENSACLG00000016922	-	97	77.536	ENSHCOG00000006004	si:ch1073-335m2.2	99	77.536	Hippocampus_comes
ENSACLG00000016922	-	98	41.851	ENSIPUG00000018212	si:ch1073-335m2.2	99	44.383	Ictalurus_punctatus
ENSACLG00000016922	-	100	52.668	ENSIPUG00000021668	spen	100	52.855	Ictalurus_punctatus
ENSACLG00000016922	-	89	67.339	ENSSTOG00000021428	SPEN	94	77.241	Ictidomys_tridecemlineatus
ENSACLG00000016922	-	90	48.960	ENSJJAG00000010882	Spen	99	82.022	Jaculus_jaculus
ENSACLG00000016922	-	100	77.962	ENSKMAG00000003882	-	100	78.018	Kryptolebias_marmoratus
ENSACLG00000016922	-	86	75.399	ENSLBEG00000019129	-	100	75.067	Labrus_bergylta
ENSACLG00000016922	-	97	82.530	ENSLBEG00000020855	si:ch1073-335m2.2	99	82.530	Labrus_bergylta
ENSACLG00000016922	-	71	85.185	ENSLACG00000003258	SPEN	76	85.185	Latimeria_chalumnae
ENSACLG00000016922	-	97	85.517	ENSLOCG00000007896	si:ch1073-335m2.2	97	85.517	Lepisosteus_oculatus
ENSACLG00000016922	-	98	65.726	ENSLAFG00000004524	SPEN	93	77.778	Loxodonta_africana
ENSACLG00000016922	-	84	66.935	ENSMLEG00000039293	SPEN	92	71.818	Mandrillus_leucophaeus
ENSACLG00000016922	-	98	77.838	ENSMAMG00000023870	si:ch1073-335m2.2	100	77.838	Mastacembelus_armatus
ENSACLG00000016922	-	95	84.024	ENSMZEG00005011762	si:ch1073-335m2.2	99	84.024	Maylandia_zebra
ENSACLG00000016922	-	91	99.746	ENSMZEG00005021491	-	99	99.746	Maylandia_zebra
ENSACLG00000016922	-	92	47.481	ENSMAUG00000008318	Spen	91	81.461	Mesocricetus_auratus
ENSACLG00000016922	-	92	47.428	ENSMOCG00000016083	Spen	97	81.461	Microtus_ochrogaster
ENSACLG00000016922	-	94	75.000	ENSMMOG00000021742	si:ch1073-335m2.2	99	80.233	Mola_mola
ENSACLG00000016922	-	100	45.632	ENSMODG00000003411	SPEN	100	44.745	Monodelphis_domestica
ENSACLG00000016922	-	100	81.591	ENSMALG00000008625	-	100	81.535	Monopterus_albus
ENSACLG00000016922	-	90	47.915	MGP_CAROLIEiJ_G0026745	Spen	97	80.899	Mus_caroli
ENSACLG00000016922	-	90	48.093	ENSMUSG00000040761	Spen	97	81.461	Mus_musculus
ENSACLG00000016922	-	99	44.460	MGP_PahariEiJ_G0029076	Spen	97	80.899	Mus_pahari
ENSACLG00000016922	-	99	44.911	MGP_SPRETEiJ_G0027724	Spen	97	80.899	Mus_spretus
ENSACLG00000016922	-	67	77.778	ENSMPUG00000016317	SPEN	96	71.818	Mustela_putorius_furo
ENSACLG00000016922	-	94	86.022	ENSMLUG00000010144	SPEN	92	86.022	Myotis_lucifugus
ENSACLG00000016922	-	91	63.265	ENSNGAG00000000641	Spen	96	81.461	Nannospalax_galili
ENSACLG00000016922	-	86	98.999	ENSNBRG00000022090	-	100	98.999	Neolamprologus_brichardi
ENSACLG00000016922	-	92	84.024	ENSNBRG00000005733	si:ch1073-335m2.2	99	84.024	Neolamprologus_brichardi
ENSACLG00000016922	-	90	82.292	ENSMEUG00000002422	SPEN	89	82.292	Notamacropus_eugenii
ENSACLG00000016922	-	85	64.791	ENSOPRG00000015800	SPEN	82	78.667	Ochotona_princeps
ENSACLG00000016922	-	100	42.823	ENSODEG00000016644	SPEN	100	42.786	Octodon_degus
ENSACLG00000016922	-	100	95.062	ENSONIG00000006573	-	100	95.062	Oreochromis_niloticus
ENSACLG00000016922	-	69	52.227	ENSOCUG00000010840	SPEN	97	63.743	Oryctolagus_cuniculus
ENSACLG00000016922	-	96	64.530	ENSORLG00000018414	si:ch1073-335m2.2	99	74.372	Oryzias_latipes
ENSACLG00000016922	-	89	66.122	ENSORLG00000028894	-	100	65.930	Oryzias_latipes
ENSACLG00000016922	-	89	66.688	ENSORLG00020007735	-	100	66.366	Oryzias_latipes_hni
ENSACLG00000016922	-	96	64.530	ENSORLG00020009351	si:ch1073-335m2.2	75	74.372	Oryzias_latipes_hni
ENSACLG00000016922	-	100	68.411	ENSORLG00015022085	-	100	68.158	Oryzias_latipes_hsok
ENSACLG00000016922	-	52	82.099	ENSORLG00015005537	si:ch1073-335m2.2	99	82.099	Oryzias_latipes_hsok
ENSACLG00000016922	-	100	68.467	ENSOMEG00000007639	-	100	68.045	Oryzias_melastigma
ENSACLG00000016922	-	96	82.822	ENSOMEG00000004509	si:ch1073-335m2.2	99	82.822	Oryzias_melastigma
ENSACLG00000016922	-	99	67.871	ENSOGAG00000025110	SPEN	94	81.461	Otolemur_garnettii
ENSACLG00000016922	-	99	45.033	ENSOARG00000008477	SPEN	96	73.099	Ovis_aries
ENSACLG00000016922	-	84	66.935	ENSPANG00000006293	SPEN	96	81.461	Papio_anubis
ENSACLG00000016922	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSACLG00000016922	-	100	53.148	ENSPKIG00000002617	SPEN	90	63.548	Paramormyrops_kingsleyae
ENSACLG00000016922	-	100	46.078	ENSPSIG00000008026	SPEN	99	78.146	Pelodiscus_sinensis
ENSACLG00000016922	-	89	47.054	ENSPEMG00000022997	Spen	97	76.552	Peromyscus_maniculatus_bairdii
ENSACLG00000016922	-	100	77.090	ENSPMEG00000006764	-	100	77.005	Poecilia_mexicana
ENSACLG00000016922	-	97	77.838	ENSPMEG00000002674	si:ch1073-335m2.2	98	77.838	Poecilia_mexicana
ENSACLG00000016922	-	100	77.033	ENSPREG00000010399	-	100	76.949	Poecilia_reticulata
ENSACLG00000016922	-	89	48.857	ENSPPYG00000001834	SPEN	96	81.461	Pongo_abelii
ENSACLG00000016922	-	90	65.323	ENSPCAG00000009543	SPEN	87	67.347	Procavia_capensis
ENSACLG00000016922	-	74	65.587	ENSPVAG00000013794	SPEN	69	80.899	Pteropus_vampyrus
ENSACLG00000016922	-	100	99.774	ENSPNYG00000012379	-	100	99.774	Pundamilia_nyererei
ENSACLG00000016922	-	95	84.024	ENSPNYG00000009042	si:ch1073-335m2.2	99	84.024	Pundamilia_nyererei
ENSACLG00000016922	-	100	56.906	ENSPNAG00000020795	spen	87	70.927	Pygocentrus_nattereri
ENSACLG00000016922	-	97	79.444	ENSPNAG00000011452	si:ch1073-335m2.2	99	79.444	Pygocentrus_nattereri
ENSACLG00000016922	-	88	66.803	ENSRNOG00000033556	Spen	97	78.146	Rattus_norvegicus
ENSACLG00000016922	-	88	66.935	ENSRBIG00000039654	SPEN	96	78.000	Rhinopithecus_bieti
ENSACLG00000016922	-	87	66.935	ENSRROG00000035686	SPEN	93	77.778	Rhinopithecus_roxellana
ENSACLG00000016922	-	100	44.940	ENSSHAG00000004960	SPEN	99	68.166	Sarcophilus_harrisii
ENSACLG00000016922	-	88	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	100	54.763	Scleropages_formosus
ENSACLG00000016922	-	100	54.593	ENSSFOG00015010267	si:ch1073-335m2.2	100	54.304	Scleropages_formosus
ENSACLG00000016922	-	100	81.090	ENSSMAG00000008996	-	100	80.950	Scophthalmus_maximus
ENSACLG00000016922	-	72	69.820	ENSSMAG00000000125	si:ch1073-335m2.2	100	69.820	Scophthalmus_maximus
ENSACLG00000016922	-	55	69.683	ENSSDUG00000008416	si:ch1073-335m2.2	54	69.683	Seriola_dumerili
ENSACLG00000016922	-	100	83.993	ENSSDUG00000003476	-	97	98.000	Seriola_dumerili
ENSACLG00000016922	-	100	83.866	ENSSLDG00000012950	-	97	98.000	Seriola_lalandi_dorsalis
ENSACLG00000016922	-	94	69.231	ENSSLDG00000023347	si:ch1073-335m2.2	95	69.231	Seriola_lalandi_dorsalis
ENSACLG00000016922	-	89	43.888	ENSSPUG00000001866	-	100	43.718	Sphenodon_punctatus
ENSACLG00000016922	-	100	85.425	ENSSPAG00000006014	-	100	85.224	Stegastes_partitus
ENSACLG00000016922	-	98	80.220	ENSSPAG00000012454	si:ch1073-335m2.2	100	78.919	Stegastes_partitus
ENSACLG00000016922	-	76	49.236	ENSSSCG00000034484	SPEN	84	81.461	Sus_scrofa
ENSACLG00000016922	-	100	74.881	ENSTRUG00000024350	-	100	74.621	Takifugu_rubripes
ENSACLG00000016922	-	62	73.500	ENSTRUG00000021008	si:ch1073-335m2.2	100	73.500	Takifugu_rubripes
ENSACLG00000016922	-	97	85.779	ENSTNIG00000010907	-	100	85.892	Tetraodon_nigroviridis
ENSACLG00000016922	-	98	80.337	ENSTNIG00000014666	si:ch1073-335m2.2	93	80.337	Tetraodon_nigroviridis
ENSACLG00000016922	-	68	81.421	ENSTBEG00000003628	SPEN	69	81.421	Tupaia_belangeri
ENSACLG00000016922	-	73	75.000	ENSTTRG00000015704	SPEN	69	78.000	Tursiops_truncatus
ENSACLG00000016922	-	67	78.283	ENSUAMG00000009600	SPEN	94	81.461	Ursus_americanus
ENSACLG00000016922	-	67	78.283	ENSUMAG00000021641	SPEN	93	75.796	Ursus_maritimus
ENSACLG00000016922	-	89	100.000	ENSVVUG00000028951	SPEN	93	100.000	Vulpes_vulpes
ENSACLG00000016922	-	97	75.000	ENSXCOG00000004516	si:ch1073-335m2.2	99	75.000	Xiphophorus_couchianus
ENSACLG00000016922	-	100	76.611	ENSXMAG00000021384	-	87	94.382	Xiphophorus_maculatus
ENSACLG00000016922	-	97	77.838	ENSXMAG00000029887	si:ch1073-335m2.2	99	77.838	Xiphophorus_maculatus