EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000017011 (Gene tree)
Gene ID: 113024186
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC113024186
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 815 bases
Position: chr6:20555478-20556292
Accession: 113024186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000025007	zf-CCCH	PF00642.24	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000025607	-	723	-	ENSACLP00000025007	240 (aa)	XP_026026831	UPI000E41D11F

Gene Model

Click here to download ENSACLG00000017011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000017011's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000017011	si:ch211-113e8.11	100	67.433	ENSAPOG00000010990	si:ch211-113e8.11	100	66.923	Acanthochromis_polyacanthus
ENSACLG00000017011	si:ch211-113e8.11	81	71.574	ENSACIG00000011566	si:ch211-113e8.11	94	76.650	Amphilophus_citrinellus
ENSACLG00000017011	si:ch211-113e8.11	100	66.667	ENSAOCG00000022156	si:ch211-113e8.11	100	65.504	Amphiprion_ocellaris
ENSACLG00000017011	si:ch211-113e8.11	100	65.891	ENSAPEG00000018284	si:ch211-113e8.11	100	65.504	Amphiprion_percula
ENSACLG00000017011	si:ch211-113e8.11	100	65.476	ENSATEG00000018391	si:ch211-113e8.11	100	64.683	Anabas_testudineus
ENSACLG00000017011	si:ch211-113e8.11	97	46.642	ENSAMXG00000000733	si:ch211-113e8.11	97	50.570	Astyanax_mexicanus
ENSACLG00000017011	si:ch211-113e8.11	99	61.328	ENSCSEG00000004538	si:ch211-113e8.11	99	58.755	Cynoglossus_semilaevis
ENSACLG00000017011	si:ch211-113e8.11	100	59.600	ENSCVAG00000020156	si:ch211-113e8.11	99	59.363	Cyprinodon_variegatus
ENSACLG00000017011	si:ch211-113e8.11	95	48.276	ENSDARG00000076585	si:ch211-113e8.11	97	50.000	Danio_rerio
ENSACLG00000017011	si:ch211-113e8.11	53	32.593	FBgn0259728	CG42382	63	32.593	Drosophila_melanogaster
ENSACLG00000017011	si:ch211-113e8.11	100	53.435	ENSELUG00000001130	si:ch211-113e8.11	100	51.331	Esox_lucius
ENSACLG00000017011	si:ch211-113e8.11	100	59.167	ENSFHEG00000007870	si:ch211-113e8.11	99	57.917	Fundulus_heteroclitus
ENSACLG00000017011	si:ch211-113e8.11	100	64.113	ENSGAFG00000020570	si:ch211-113e8.11	100	64.516	Gambusia_affinis
ENSACLG00000017011	si:ch211-113e8.11	100	97.083	ENSHBUG00000003552	si:ch211-113e8.11	100	97.083	Haplochromis_burtoni
ENSACLG00000017011	si:ch211-113e8.11	99	56.846	ENSHCOG00000002041	si:ch211-113e8.11	99	55.833	Hippocampus_comes
ENSACLG00000017011	si:ch211-113e8.11	95	50.413	ENSIPUG00000002260	si:ch211-113e8.11	93	50.826	Ictalurus_punctatus
ENSACLG00000017011	si:ch211-113e8.11	100	63.821	ENSKMAG00000000086	si:ch211-113e8.11	99	63.821	Kryptolebias_marmoratus
ENSACLG00000017011	si:ch211-113e8.11	100	55.970	ENSLBEG00000008353	si:ch211-113e8.11	100	54.682	Labrus_bergylta
ENSACLG00000017011	si:ch211-113e8.11	73	42.373	ENSLACG00000004304	si:ch211-113e8.11	77	43.226	Latimeria_chalumnae
ENSACLG00000017011	si:ch211-113e8.11	89	61.088	ENSMAMG00000019098	si:ch211-113e8.11	90	60.444	Mastacembelus_armatus
ENSACLG00000017011	si:ch211-113e8.11	100	95.417	ENSMZEG00005023658	si:ch211-113e8.11	100	95.417	Maylandia_zebra
ENSACLG00000017011	si:ch211-113e8.11	72	67.797	ENSMMOG00000007254	si:ch211-113e8.11	100	55.187	Mola_mola
ENSACLG00000017011	si:ch211-113e8.11	100	62.452	ENSMALG00000005110	si:ch211-113e8.11	100	60.000	Monopterus_albus
ENSACLG00000017011	si:ch211-113e8.11	100	98.333	ENSNBRG00000015060	si:ch211-113e8.11	100	98.333	Neolamprologus_brichardi
ENSACLG00000017011	si:ch211-113e8.11	100	59.839	ENSORLG00000023699	si:ch211-113e8.11	100	58.635	Oryzias_latipes
ENSACLG00000017011	si:ch211-113e8.11	100	59.600	ENSORLG00020022094	si:ch211-113e8.11	100	57.200	Oryzias_latipes_hni
ENSACLG00000017011	si:ch211-113e8.11	100	59.839	ENSORLG00015002588	si:ch211-113e8.11	100	58.635	Oryzias_latipes_hsok
ENSACLG00000017011	si:ch211-113e8.11	100	60.000	ENSOMEG00000010624	si:ch211-113e8.11	100	59.600	Oryzias_melastigma
ENSACLG00000017011	si:ch211-113e8.11	56	53.521	ENSPKIG00000023576	si:ch211-113e8.11	95	45.000	Paramormyrops_kingsleyae
ENSACLG00000017011	si:ch211-113e8.11	96	55.652	ENSPMGG00000018547	si:ch211-113e8.11	97	55.652	Periophthalmus_magnuspinnatus
ENSACLG00000017011	si:ch211-113e8.11	98	65.702	ENSPFOG00000007950	si:ch211-113e8.11	100	65.289	Poecilia_formosa
ENSACLG00000017011	si:ch211-113e8.11	100	66.532	ENSPLAG00000002081	si:ch211-113e8.11	100	66.129	Poecilia_latipinna
ENSACLG00000017011	si:ch211-113e8.11	100	66.129	ENSPMEG00000017505	si:ch211-113e8.11	100	65.726	Poecilia_mexicana
ENSACLG00000017011	si:ch211-113e8.11	100	68.313	ENSPREG00000008530	si:ch211-113e8.11	100	68.313	Poecilia_reticulata
ENSACLG00000017011	si:ch211-113e8.11	100	98.750	ENSPNYG00000022856	si:ch211-113e8.11	100	98.750	Pundamilia_nyererei
ENSACLG00000017011	si:ch211-113e8.11	98	43.426	ENSPNAG00000013782	si:ch211-113e8.11	99	43.775	Pygocentrus_nattereri
ENSACLG00000017011	si:ch211-113e8.11	97	48.133	ENSSFOG00015000959	si:ch211-113e8.11	97	48.163	Scleropages_formosus
ENSACLG00000017011	si:ch211-113e8.11	100	66.265	ENSSMAG00000009732	si:ch211-113e8.11	100	64.659	Scophthalmus_maximus
ENSACLG00000017011	si:ch211-113e8.11	100	68.627	ENSSDUG00000000112	si:ch211-113e8.11	100	67.843	Seriola_dumerili
ENSACLG00000017011	si:ch211-113e8.11	100	69.412	ENSSLDG00000003287	si:ch211-113e8.11	100	69.020	Seriola_lalandi_dorsalis
ENSACLG00000017011	si:ch211-113e8.11	100	68.093	ENSSPAG00000001375	si:ch211-113e8.11	100	67.704	Stegastes_partitus
ENSACLG00000017011	si:ch211-113e8.11	99	56.048	ENSTRUG00000023898	si:ch211-113e8.11	99	54.435	Takifugu_rubripes
ENSACLG00000017011	si:ch211-113e8.11	100	64.113	ENSXMAG00000024104	si:ch211-113e8.11	100	64.113	Xiphophorus_maculatus