EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000017063 (Gene tree)
Gene ID: 113033656
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 15113 bases
Position: chr12:14289499-14304611
Accession: 113033656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000025141	ResIII	PF04851.15	1.8e-07	1	1
ENSACLP00000025066	ResIII	PF04851.15	1.9e-07	1	1
ENSACLP00000025182	ResIII	PF04851.15	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000025667	-	4089	-	ENSACLP00000025066	1053 (aa)	XP_026043456	UPI000E4190BC
ENSACLT00000025789	-	3702	-	ENSACLP00000025182	1033 (aa)	-	-
ENSACLT00000025747	-	3993	-	ENSACLP00000025141	1021 (aa)	-	-

Gene Model

Click here to download ENSACLG00000017063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000017063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000017063	smarcad1a	50	31.502	ENSACLG00000007826	rad54b	56	31.721
ENSACLG00000017063	smarcad1a	51	35.818	ENSACLG00000007613	hells	69	35.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000017063	smarcad1a	99	61.308	ENSG00000163104	SMARCAD1	100	67.114	Homo_sapiens
ENSACLG00000017063	smarcad1a	100	79.605	ENSAPOG00000011446	smarcad1a	100	79.174	Acanthochromis_polyacanthus
ENSACLG00000017063	smarcad1a	89	61.180	ENSAMEG00000005844	SMARCAD1	98	62.376	Ailuropoda_melanoleuca
ENSACLG00000017063	smarcad1a	72	92.481	ENSACIG00000018326	smarcad1a	97	92.481	Amphilophus_citrinellus
ENSACLG00000017063	smarcad1a	100	79.906	ENSAOCG00000019762	smarcad1a	100	79.944	Amphiprion_ocellaris
ENSACLG00000017063	smarcad1a	100	80.188	ENSAPEG00000003889	smarcad1a	100	80.225	Amphiprion_percula
ENSACLG00000017063	smarcad1a	95	78.911	ENSATEG00000015608	smarcad1a	99	79.505	Anabas_testudineus
ENSACLG00000017063	smarcad1a	80	67.601	ENSAPLG00000004630	SMARCAD1	90	62.707	Anas_platyrhynchos
ENSACLG00000017063	smarcad1a	79	66.199	ENSACAG00000013554	SMARCAD1	95	63.006	Anolis_carolinensis
ENSACLG00000017063	smarcad1a	99	61.005	ENSANAG00000020488	SMARCAD1	98	62.181	Aotus_nancymaae
ENSACLG00000017063	smarcad1a	64	71.214	ENSAMXG00000015470	smarcad1a	94	71.214	Astyanax_mexicanus
ENSACLG00000017063	smarcad1a	84	63.170	ENSAMXG00000019130	smarcad1b	87	71.965	Astyanax_mexicanus
ENSACLG00000017063	smarcad1a	98	60.876	ENSBTAG00000017061	SMARCAD1	98	62.074	Bos_taurus
ENSACLG00000017063	smarcad1a	61	41.509	WBGene00010845	M03C11.8	74	39.276	Caenorhabditis_elegans
ENSACLG00000017063	smarcad1a	99	61.308	ENSCJAG00000006778	SMARCAD1	98	62.500	Callithrix_jacchus
ENSACLG00000017063	smarcad1a	98	61.317	ENSCAFG00000010026	SMARCAD1	98	62.518	Canis_familiaris
ENSACLG00000017063	smarcad1a	89	61.317	ENSCAFG00020003994	SMARCAD1	96	62.536	Canis_lupus_dingo
ENSACLG00000017063	smarcad1a	99	61.035	ENSCHIG00000012905	SMARCAD1	98	62.358	Capra_hircus
ENSACLG00000017063	smarcad1a	98	61.317	ENSTSYG00000002706	SMARCAD1	97	63.165	Carlito_syrichta
ENSACLG00000017063	smarcad1a	92	54.444	ENSCAPG00000016744	SMARCAD1	91	56.278	Cavia_aperea
ENSACLG00000017063	smarcad1a	92	61.180	ENSCPOG00000011398	SMARCAD1	92	66.615	Cavia_porcellus
ENSACLG00000017063	smarcad1a	99	61.308	ENSCCAG00000022264	SMARCAD1	100	67.114	Cebus_capucinus
ENSACLG00000017063	smarcad1a	99	61.308	ENSCATG00000035663	SMARCAD1	98	63.231	Cercocebus_atys
ENSACLG00000017063	smarcad1a	86	61.308	ENSCSAG00000004186	SMARCAD1	98	62.500	Chlorocebus_sabaeus
ENSACLG00000017063	smarcad1a	100	50.227	ENSCPBG00000013203	SMARCAD1	100	50.182	Chrysemys_picta_bellii
ENSACLG00000017063	smarcad1a	64	49.094	ENSCING00000001688	-	98	49.094	Ciona_intestinalis
ENSACLG00000017063	smarcad1a	99	61.308	ENSCANG00000003556	SMARCAD1	100	67.114	Colobus_angolensis_palliatus
ENSACLG00000017063	smarcad1a	100	49.174	ENSCGRG00001015056	Smarcad1	63	66.147	Cricetulus_griseus_chok1gshd
ENSACLG00000017063	smarcad1a	100	49.174	ENSCGRG00000014087	Smarcad1	63	66.147	Cricetulus_griseus_crigri
ENSACLG00000017063	smarcad1a	100	70.381	ENSCSEG00000014419	-	100	69.686	Cynoglossus_semilaevis
ENSACLG00000017063	smarcad1a	100	71.283	ENSCSEG00000017903	smarcad1a	100	70.534	Cynoglossus_semilaevis
ENSACLG00000017063	smarcad1a	92	70.426	ENSDARG00000014041	smarcad1a	100	57.930	Danio_rerio
ENSACLG00000017063	smarcad1a	64	75.422	ENSDARG00000073721	smarcad1b	85	63.647	Danio_rerio
ENSACLG00000017063	smarcad1a	99	61.172	ENSDNOG00000000806	-	98	62.536	Dasypus_novemcinctus
ENSACLG00000017063	smarcad1a	99	62.393	ENSDORG00000012331	Smarcad1	98	62.393	Dipodomys_ordii
ENSACLG00000017063	smarcad1a	63	44.801	FBgn0032157	Etl1	77	44.745	Drosophila_melanogaster
ENSACLG00000017063	smarcad1a	61	48.903	ENSEBUG00000003969	smarcad1a	97	48.485	Eptatretus_burgeri
ENSACLG00000017063	smarcad1a	98	61.180	ENSEASG00005012382	SMARCAD1	98	62.376	Equus_asinus_asinus
ENSACLG00000017063	smarcad1a	98	61.180	ENSECAG00000011562	SMARCAD1	98	62.376	Equus_caballus
ENSACLG00000017063	smarcad1a	100	67.213	ENSELUG00000018535	smarcad1a	100	67.085	Esox_lucius
ENSACLG00000017063	smarcad1a	84	61.700	ENSELUG00000019154	smarcad1b	78	70.235	Esox_lucius
ENSACLG00000017063	smarcad1a	99	61.172	ENSFCAG00000003958	SMARCAD1	100	67.114	Felis_catus
ENSACLG00000017063	smarcad1a	100	50.230	ENSFALG00000006089	SMARCAD1	66	66.226	Ficedula_albicollis
ENSACLG00000017063	smarcad1a	90	66.615	ENSFDAG00000017027	SMARCAD1	92	66.615	Fukomys_damarensis
ENSACLG00000017063	smarcad1a	100	69.613	ENSFHEG00000012778	smarcad1a	65	81.598	Fundulus_heteroclitus
ENSACLG00000017063	smarcad1a	90	75.933	ENSGMOG00000018995	smarcad1a	97	81.429	Gadus_morhua
ENSACLG00000017063	smarcad1a	82	59.870	ENSGALG00000037339	SMARCAD1	91	63.519	Gallus_gallus
ENSACLG00000017063	smarcad1a	100	68.091	ENSGAFG00000013498	smarcad1a	100	66.819	Gambusia_affinis
ENSACLG00000017063	smarcad1a	91	83.916	ENSGACG00000007327	smarcad1a	99	84.943	Gasterosteus_aculeatus
ENSACLG00000017063	smarcad1a	91	55.911	ENSGAGG00000008582	SMARCAD1	100	50.319	Gopherus_agassizii
ENSACLG00000017063	smarcad1a	99	61.308	ENSGGOG00000023001	SMARCAD1	98	62.500	Gorilla_gorilla
ENSACLG00000017063	smarcad1a	100	99.145	ENSHBUG00000011042	smarcad1a	100	99.145	Haplochromis_burtoni
ENSACLG00000017063	smarcad1a	80	66.615	ENSHGLG00000005070	SMARCAD1	76	66.615	Heterocephalus_glaber_female
ENSACLG00000017063	smarcad1a	80	66.615	ENSHGLG00100006812	SMARCAD1	76	66.615	Heterocephalus_glaber_male
ENSACLG00000017063	smarcad1a	100	62.011	ENSHCOG00000007848	smarcad1a	100	61.374	Hippocampus_comes
ENSACLG00000017063	smarcad1a	71	74.080	ENSIPUG00000022817	smarcad1b	83	71.199	Ictalurus_punctatus
ENSACLG00000017063	smarcad1a	99	57.007	ENSIPUG00000000242	smarcad1a	96	60.911	Ictalurus_punctatus
ENSACLG00000017063	smarcad1a	90	66.147	ENSSTOG00000001227	SMARCAD1	92	66.147	Ictidomys_tridecemlineatus
ENSACLG00000017063	smarcad1a	100	49.954	ENSJJAG00000022342	Smarcad1	92	66.303	Jaculus_jaculus
ENSACLG00000017063	smarcad1a	99	74.525	ENSKMAG00000021351	smarcad1a	99	74.525	Kryptolebias_marmoratus
ENSACLG00000017063	smarcad1a	100	73.709	ENSLBEG00000008088	smarcad1a	99	74.460	Labrus_bergylta
ENSACLG00000017063	smarcad1a	87	74.501	ENSLOCG00000012909	smarcad1a	99	70.490	Lepisosteus_oculatus
ENSACLG00000017063	smarcad1a	90	65.055	ENSLAFG00000000040	SMARCAD1	92	65.055	Loxodonta_africana
ENSACLG00000017063	smarcad1a	99	61.308	ENSMFAG00000042606	SMARCAD1	98	62.500	Macaca_fascicularis
ENSACLG00000017063	smarcad1a	90	61.308	ENSMMUG00000022242	SMARCAD1	96	62.500	Macaca_mulatta
ENSACLG00000017063	smarcad1a	99	61.308	ENSMNEG00000038117	SMARCAD1	100	67.114	Macaca_nemestrina
ENSACLG00000017063	smarcad1a	99	61.308	ENSMLEG00000038333	SMARCAD1	100	67.114	Mandrillus_leucophaeus
ENSACLG00000017063	smarcad1a	100	79.981	ENSMAMG00000000933	smarcad1a	100	79.131	Mastacembelus_armatus
ENSACLG00000017063	smarcad1a	100	99.902	ENSMZEG00005005203	smarcad1a	100	99.902	Maylandia_zebra
ENSACLG00000017063	smarcad1a	85	64.937	ENSMGAG00000005577	SMARCAD1	87	64.937	Meleagris_gallopavo
ENSACLG00000017063	smarcad1a	100	49.266	ENSMAUG00000008417	Smarcad1	63	66.303	Mesocricetus_auratus
ENSACLG00000017063	smarcad1a	100	49.954	ENSMICG00000009746	SMARCAD1	100	49.817	Microcebus_murinus
ENSACLG00000017063	smarcad1a	98	60.631	ENSMOCG00000017142	Smarcad1	92	66.459	Microtus_ochrogaster
ENSACLG00000017063	smarcad1a	75	87.518	ENSMMOG00000000275	smarcad1a	100	85.503	Mola_mola
ENSACLG00000017063	smarcad1a	89	61.989	ENSMODG00000019268	SMARCAD1	76	67.395	Monodelphis_domestica
ENSACLG00000017063	smarcad1a	83	66.147	MGP_CAROLIEiJ_G0028458	-	61	66.147	Mus_caroli
ENSACLG00000017063	smarcad1a	62	66.147	ENSMUSG00000029920	Smarcad1	63	66.147	Mus_musculus
ENSACLG00000017063	smarcad1a	62	66.147	MGP_PahariEiJ_G0022198	Smarcad1	63	66.147	Mus_pahari
ENSACLG00000017063	smarcad1a	62	66.147	MGP_SPRETEiJ_G0029462	Smarcad1	63	66.147	Mus_spretus
ENSACLG00000017063	smarcad1a	98	61.180	ENSMPUG00000002111	SMARCAD1	98	62.376	Mustela_putorius_furo
ENSACLG00000017063	smarcad1a	99	60.598	ENSMLUG00000000425	SMARCAD1	92	66.252	Myotis_lucifugus
ENSACLG00000017063	smarcad1a	100	49.631	ENSNGAG00000000810	Smarcad1	63	65.991	Nannospalax_galili
ENSACLG00000017063	smarcad1a	76	95.808	ENSNBRG00000012749	smarcad1a	97	95.808	Neolamprologus_brichardi
ENSACLG00000017063	smarcad1a	99	61.308	ENSNLEG00000014225	SMARCAD1	100	67.114	Nomascus_leucogenys
ENSACLG00000017063	smarcad1a	90	66.615	ENSODEG00000004334	SMARCAD1	92	66.615	Octodon_degus
ENSACLG00000017063	smarcad1a	95	96.100	ENSONIG00000015059	smarcad1a	100	91.557	Oreochromis_niloticus
ENSACLG00000017063	smarcad1a	74	68.429	ENSOANG00000013764	SMARCAD1	94	64.986	Ornithorhynchus_anatinus
ENSACLG00000017063	smarcad1a	99	62.216	ENSOCUG00000017283	SMARCAD1	98	62.216	Oryctolagus_cuniculus
ENSACLG00000017063	smarcad1a	100	71.295	ENSORLG00000004869	smarcad1a	100	71.065	Oryzias_latipes
ENSACLG00000017063	smarcad1a	100	71.295	ENSORLG00020020569	smarcad1a	100	70.971	Oryzias_latipes_hni
ENSACLG00000017063	smarcad1a	100	71.107	ENSORLG00015009045	smarcad1a	100	70.877	Oryzias_latipes_hsok
ENSACLG00000017063	smarcad1a	99	71.564	ENSOMEG00000023032	smarcad1a	100	71.145	Oryzias_melastigma
ENSACLG00000017063	smarcad1a	100	49.177	ENSOGAG00000011444	SMARCAD1	63	66.096	Otolemur_garnettii
ENSACLG00000017063	smarcad1a	99	61.035	ENSOARG00000017851	SMARCAD1	98	62.358	Ovis_aries
ENSACLG00000017063	smarcad1a	99	61.308	ENSPPAG00000035715	SMARCAD1	98	62.500	Pan_paniscus
ENSACLG00000017063	smarcad1a	99	61.172	ENSPPRG00000024756	SMARCAD1	100	67.114	Panthera_pardus
ENSACLG00000017063	smarcad1a	99	61.005	ENSPTIG00000017868	SMARCAD1	92	66.407	Panthera_tigris_altaica
ENSACLG00000017063	smarcad1a	99	61.308	ENSPTRG00000023126	SMARCAD1	100	67.114	Pan_troglodytes
ENSACLG00000017063	smarcad1a	99	59.973	ENSPANG00000019757	SMARCAD1	98	62.480	Papio_anubis
ENSACLG00000017063	smarcad1a	90	56.142	ENSPSIG00000010255	SMARCAD1	79	64.791	Pelodiscus_sinensis
ENSACLG00000017063	smarcad1a	63	78.416	ENSPMGG00000010735	smarcad1a	97	76.833	Periophthalmus_magnuspinnatus
ENSACLG00000017063	smarcad1a	98	53.444	ENSPEMG00000001854	Smarcad1	97	54.816	Peromyscus_maniculatus_bairdii
ENSACLG00000017063	smarcad1a	93	57.413	ENSPMAG00000003516	smarcad1a	94	57.413	Petromyzon_marinus
ENSACLG00000017063	smarcad1a	82	62.125	ENSPCIG00000008137	SMARCAD1	97	56.941	Phascolarctos_cinereus
ENSACLG00000017063	smarcad1a	100	70.754	ENSPFOG00000019116	smarcad1a	100	68.445	Poecilia_formosa
ENSACLG00000017063	smarcad1a	100	70.705	ENSPLAG00000000108	smarcad1a	100	68.407	Poecilia_latipinna
ENSACLG00000017063	smarcad1a	100	70.663	ENSPMEG00000009155	smarcad1a	100	68.354	Poecilia_mexicana
ENSACLG00000017063	smarcad1a	100	73.095	ENSPREG00000018185	smarcad1a	100	72.222	Poecilia_reticulata
ENSACLG00000017063	smarcad1a	99	60.870	ENSPPYG00000014935	SMARCAD1	98	62.040	Pongo_abelii
ENSACLG00000017063	smarcad1a	51	64.449	ENSPCOG00000020478	SMARCAD1	62	64.449	Propithecus_coquereli
ENSACLG00000017063	smarcad1a	100	59.808	ENSPVAG00000001760	SMARCAD1	98	61.506	Pteropus_vampyrus
ENSACLG00000017063	smarcad1a	76	97.764	ENSPNYG00000010087	smarcad1a	97	97.764	Pundamilia_nyererei
ENSACLG00000017063	smarcad1a	85	63.333	ENSPNAG00000010099	smarcad1b	83	72.529	Pygocentrus_nattereri
ENSACLG00000017063	smarcad1a	100	58.142	ENSPNAG00000001663	smarcad1a	100	57.854	Pygocentrus_nattereri
ENSACLG00000017063	smarcad1a	62	66.459	ENSRNOG00000006391	Smarcad1	63	66.459	Rattus_norvegicus
ENSACLG00000017063	smarcad1a	99	61.308	ENSRBIG00000041989	SMARCAD1	98	62.500	Rhinopithecus_bieti
ENSACLG00000017063	smarcad1a	99	61.308	ENSRROG00000035309	SMARCAD1	98	62.500	Rhinopithecus_roxellana
ENSACLG00000017063	smarcad1a	99	61.308	ENSSBOG00000032114	SMARCAD1	100	67.114	Saimiri_boliviensis_boliviensis
ENSACLG00000017063	smarcad1a	100	56.848	ENSSHAG00000001279	SMARCAD1	91	67.707	Sarcophilus_harrisii
ENSACLG00000017063	smarcad1a	69	70.490	ENSSFOG00015020909	smarcad1a	94	70.506	Scleropages_formosus
ENSACLG00000017063	smarcad1a	97	68.966	ENSSFOG00015016814	smarcad1b	92	74.603	Scleropages_formosus
ENSACLG00000017063	smarcad1a	100	78.605	ENSSMAG00000001326	smarcad1a	100	78.399	Scophthalmus_maximus
ENSACLG00000017063	smarcad1a	78	83.353	ENSSDUG00000022338	smarcad1a	99	82.895	Seriola_dumerili
ENSACLG00000017063	smarcad1a	100	78.110	ENSSLDG00000024986	smarcad1a	100	78.952	Seriola_lalandi_dorsalis
ENSACLG00000017063	smarcad1a	58	68.908	ENSSPUG00000004633	SMARCAD1	99	68.908	Sphenodon_punctatus
ENSACLG00000017063	smarcad1a	100	79.812	ENSSPAG00000001970	smarcad1a	100	79.569	Stegastes_partitus
ENSACLG00000017063	smarcad1a	98	61.180	ENSSSCG00000009193	SMARCAD1	98	62.376	Sus_scrofa
ENSACLG00000017063	smarcad1a	77	63.418	ENSTGUG00000003127	SMARCAD1	96	63.803	Taeniopygia_guttata
ENSACLG00000017063	smarcad1a	86	85.307	ENSTNIG00000017585	smarcad1a	97	85.307	Tetraodon_nigroviridis
ENSACLG00000017063	smarcad1a	76	69.444	ENSTBEG00000002789	SMARCAD1	82	69.444	Tupaia_belangeri
ENSACLG00000017063	smarcad1a	89	60.680	ENSTTRG00000000226	SMARCAD1	83	63.120	Tursiops_truncatus
ENSACLG00000017063	smarcad1a	98	61.180	ENSUAMG00000022262	SMARCAD1	98	62.376	Ursus_americanus
ENSACLG00000017063	smarcad1a	89	61.180	ENSUMAG00000004549	SMARCAD1	98	62.376	Ursus_maritimus
ENSACLG00000017063	smarcad1a	100	60.548	ENSVVUG00000007271	SMARCAD1	99	62.079	Vulpes_vulpes
ENSACLG00000017063	smarcad1a	89	57.163	ENSXETG00000019214	smarcad1	94	59.222	Xenopus_tropicalis
ENSACLG00000017063	smarcad1a	82	82.963	ENSXCOG00000005232	smarcad1a	88	82.963	Xiphophorus_couchianus
ENSACLG00000017063	smarcad1a	100	70.701	ENSXMAG00000015350	smarcad1a	100	69.835	Xiphophorus_maculatus