EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000017148 (Gene tree)
Gene ID: 113025715
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 12438 bases
Position: chr1:30176694-30189131
Accession: 113025715
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000025199	zf-C2H2	PF00096.26	2e-35	1	6
ENSACLP00000025199	zf-C2H2	PF00096.26	2e-35	2	6
ENSACLP00000025199	zf-C2H2	PF00096.26	2e-35	3	6
ENSACLP00000025199	zf-C2H2	PF00096.26	2e-35	4	6
ENSACLP00000025199	zf-C2H2	PF00096.26	2e-35	5	6
ENSACLP00000025199	zf-C2H2	PF00096.26	2e-35	6	6
ENSACLP00000025195	zf-C2H2	PF00096.26	2.8e-33	1	6
ENSACLP00000025195	zf-C2H2	PF00096.26	2.8e-33	2	6
ENSACLP00000025195	zf-C2H2	PF00096.26	2.8e-33	3	6
ENSACLP00000025195	zf-C2H2	PF00096.26	2.8e-33	4	6
ENSACLP00000025195	zf-C2H2	PF00096.26	2.8e-33	5	6
ENSACLP00000025195	zf-C2H2	PF00096.26	2.8e-33	6	6
ENSACLP00000025199	zf-met	PF12874.7	2.6e-22	1	5
ENSACLP00000025199	zf-met	PF12874.7	2.6e-22	2	5
ENSACLP00000025199	zf-met	PF12874.7	2.6e-22	3	5
ENSACLP00000025199	zf-met	PF12874.7	2.6e-22	4	5
ENSACLP00000025199	zf-met	PF12874.7	2.6e-22	5	5
ENSACLP00000025195	zf-met	PF12874.7	5.7e-22	1	5
ENSACLP00000025195	zf-met	PF12874.7	5.7e-22	2	5
ENSACLP00000025195	zf-met	PF12874.7	5.7e-22	3	5
ENSACLP00000025195	zf-met	PF12874.7	5.7e-22	4	5
ENSACLP00000025195	zf-met	PF12874.7	5.7e-22	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000025801	-	6119	XM_026173798	ENSACLP00000025195	1305 (aa)	XP_026029583	UPI00032A410F
ENSACLT00000025805	-	5321	-	ENSACLP00000025199	1209 (aa)	-	-

Gene Model

Click here to download ENSACLG00000017148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000017148's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000017148	sall1a	60	39.286	ENSACLG00000022383	-	87	39.286
ENSACLG00000017148	sall1a	100	63.462	ENSACLG00000017851	sall4	100	60.000
ENSACLG00000017148	sall1a	99	65.385	ENSACLG00000001619	sall3b	100	65.385
ENSACLG00000017148	sall1a	50	32.044	ENSACLG00000019167	-	63	42.857
ENSACLG00000017148	sall1a	63	49.020	ENSACLG00000019318	-	98	49.020
ENSACLG00000017148	sall1a	79	63.415	ENSACLG00000022451	sall3a	98	63.415
ENSACLG00000017148	sall1a	71	36.047	ENSACLG00000011237	-	90	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000017148	sall1a	99	67.913	ENSG00000103449	SALL1	100	68.212	Homo_sapiens
ENSACLG00000017148	sall1a	100	93.879	ENSAPOG00000022764	sall1a	100	93.879	Acanthochromis_polyacanthus
ENSACLG00000017148	sall1a	99	67.233	ENSAMEG00000006817	SALL1	100	66.940	Ailuropoda_melanoleuca
ENSACLG00000017148	sall1a	100	96.705	ENSACIG00000004231	sall1a	100	96.705	Amphilophus_citrinellus
ENSACLG00000017148	sall1a	100	94.185	ENSAOCG00000002800	sall1a	100	94.185	Amphiprion_ocellaris
ENSACLG00000017148	sall1a	100	93.879	ENSAPEG00000010179	sall1a	100	93.879	Amphiprion_percula
ENSACLG00000017148	sall1a	99	91.960	ENSATEG00000003006	sall1a	100	91.577	Anabas_testudineus
ENSACLG00000017148	sall1a	100	69.173	ENSAPLG00000003356	SALL1	100	69.451	Anas_platyrhynchos
ENSACLG00000017148	sall1a	99	68.127	ENSACAG00000014399	SALL1	97	67.375	Anolis_carolinensis
ENSACLG00000017148	sall1a	99	67.769	ENSANAG00000027238	SALL1	100	68.342	Aotus_nancymaae
ENSACLG00000017148	sall1a	99	52.058	ENSAMXG00000017702	sall1b	99	50.405	Astyanax_mexicanus
ENSACLG00000017148	sall1a	100	80.030	ENSAMXG00000018599	sall1a	100	80.488	Astyanax_mexicanus
ENSACLG00000017148	sall1a	100	67.216	ENSBTAG00000008544	SALL1	100	67.667	Bos_taurus
ENSACLG00000017148	sall1a	99	68.090	ENSCJAG00000001740	SALL1	100	68.661	Callithrix_jacchus
ENSACLG00000017148	sall1a	99	67.449	ENSCAFG00000009755	SALL1	100	67.790	Canis_familiaris
ENSACLG00000017148	sall1a	99	67.449	ENSCAFG00020002842	SALL1	100	67.790	Canis_lupus_dingo
ENSACLG00000017148	sall1a	100	67.191	ENSCHIG00000026074	SALL1	100	67.616	Capra_hircus
ENSACLG00000017148	sall1a	99	68.413	ENSTSYG00000029464	SALL1	100	68.413	Carlito_syrichta
ENSACLG00000017148	sall1a	99	67.797	ENSCPOG00000006564	SALL1	100	67.912	Cavia_porcellus
ENSACLG00000017148	sall1a	99	66.217	ENSCCAG00000001639	SALL1	100	66.642	Cebus_capucinus
ENSACLG00000017148	sall1a	99	67.988	ENSCATG00000004982	SALL1	100	68.559	Cercocebus_atys
ENSACLG00000017148	sall1a	99	67.537	ENSCLAG00000006380	SALL1	100	67.636	Chinchilla_lanigera
ENSACLG00000017148	sall1a	99	67.390	ENSCSAG00000005319	SALL1	100	67.812	Chlorocebus_sabaeus
ENSACLG00000017148	sall1a	70	66.004	ENSCHOG00000000800	-	69	66.337	Choloepus_hoffmanni
ENSACLG00000017148	sall1a	100	68.769	ENSCPBG00000015924	SALL1	100	69.121	Chrysemys_picta_bellii
ENSACLG00000017148	sall1a	99	68.212	ENSCANG00000036664	SALL1	100	68.867	Colobus_angolensis_palliatus
ENSACLG00000017148	sall1a	99	66.317	ENSCGRG00001023314	-	100	67.091	Cricetulus_griseus_chok1gshd
ENSACLG00000017148	sall1a	99	66.181	ENSCGRG00000009496	Sall1	100	66.743	Cricetulus_griseus_crigri
ENSACLG00000017148	sall1a	99	89.868	ENSCSEG00000009349	sall1a	99	89.847	Cynoglossus_semilaevis
ENSACLG00000017148	sall1a	90	90.112	ENSCVAG00000020513	sall1a	99	90.112	Cyprinodon_variegatus
ENSACLG00000017148	sall1a	100	78.691	ENSDARG00000074319	sall1a	100	78.311	Danio_rerio
ENSACLG00000017148	sall1a	99	48.123	ENSDARG00000075891	sall1b	99	47.278	Danio_rerio
ENSACLG00000017148	sall1a	99	68.145	ENSDNOG00000016413	SALL1	100	67.913	Dasypus_novemcinctus
ENSACLG00000017148	sall1a	99	67.583	ENSETEG00000015150	SALL1	100	67.405	Echinops_telfairi
ENSACLG00000017148	sall1a	64	63.462	ENSEBUG00000011732	SALL1	97	63.462	Eptatretus_burgeri
ENSACLG00000017148	sall1a	67	40.632	ENSEBUG00000008798	SALL1	67	41.223	Eptatretus_burgeri
ENSACLG00000017148	sall1a	99	67.814	ENSEASG00005014602	SALL1	100	67.967	Equus_asinus_asinus
ENSACLG00000017148	sall1a	90	65.870	ENSECAG00000011334	SALL1	99	66.005	Equus_caballus
ENSACLG00000017148	sall1a	99	67.340	ENSEEUG00000002014	SALL1	100	67.661	Erinaceus_europaeus
ENSACLG00000017148	sall1a	100	54.470	ENSELUG00000017774	-	100	54.709	Esox_lucius
ENSACLG00000017148	sall1a	100	76.995	ENSELUG00000006159	sall1a	100	77.067	Esox_lucius
ENSACLG00000017148	sall1a	99	66.158	ENSFCAG00000024654	SALL1	100	66.617	Felis_catus
ENSACLG00000017148	sall1a	100	69.451	ENSFALG00000000074	SALL1	100	69.503	Ficedula_albicollis
ENSACLG00000017148	sall1a	100	91.125	ENSFHEG00000012579	sall1a	100	91.125	Fundulus_heteroclitus
ENSACLG00000017148	sall1a	75	63.265	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSACLG00000017148	sall1a	97	40.724	ENSGMOG00000013383	-	73	45.427	Gadus_morhua
ENSACLG00000017148	sall1a	100	83.918	ENSGMOG00000006103	sall1a	100	83.918	Gadus_morhua
ENSACLG00000017148	sall1a	100	69.300	ENSGALG00000039238	SALL1	100	69.202	Gallus_gallus
ENSACLG00000017148	sall1a	100	91.597	ENSGAFG00000009964	sall1a	100	91.597	Gambusia_affinis
ENSACLG00000017148	sall1a	99	90.123	ENSGACG00000016702	sall1a	99	90.123	Gasterosteus_aculeatus
ENSACLG00000017148	sall1a	100	68.544	ENSGAGG00000013979	SALL1	100	68.896	Gopherus_agassizii
ENSACLG00000017148	sall1a	99	67.838	ENSGGOG00000000663	SALL1	100	68.138	Gorilla_gorilla
ENSACLG00000017148	sall1a	100	99.770	ENSHBUG00000022005	sall1a	100	99.770	Haplochromis_burtoni
ENSACLG00000017148	sall1a	99	67.886	ENSHGLG00000004288	-	100	68.009	Heterocephalus_glaber_female
ENSACLG00000017148	sall1a	99	67.886	ENSHGLG00100017496	SALL1	100	68.009	Heterocephalus_glaber_male
ENSACLG00000017148	sall1a	100	84.318	ENSHCOG00000000974	sall1a	100	84.015	Hippocampus_comes
ENSACLG00000017148	sall1a	99	50.410	ENSIPUG00000022928	sall1b	99	49.735	Ictalurus_punctatus
ENSACLG00000017148	sall1a	100	79.359	ENSIPUG00000016265	SALL1	100	78.642	Ictalurus_punctatus
ENSACLG00000017148	sall1a	99	67.730	ENSSTOG00000020885	SALL1	100	68.155	Ictidomys_tridecemlineatus
ENSACLG00000017148	sall1a	100	92.568	ENSKMAG00000016681	sall1a	100	92.502	Kryptolebias_marmoratus
ENSACLG00000017148	sall1a	99	90.264	ENSLBEG00000012207	sall1a	95	90.368	Labrus_bergylta
ENSACLG00000017148	sall1a	100	68.726	ENSLACG00000003556	SALL1	100	69.329	Latimeria_chalumnae
ENSACLG00000017148	sall1a	97	38.456	ENSLACG00000014018	-	93	39.476	Latimeria_chalumnae
ENSACLG00000017148	sall1a	100	77.080	ENSLOCG00000007283	sall1b	100	77.005	Lepisosteus_oculatus
ENSACLG00000017148	sall1a	99	67.851	ENSLAFG00000015251	SALL1	100	68.015	Loxodonta_africana
ENSACLG00000017148	sall1a	99	68.114	ENSMFAG00000003298	SALL1	100	68.586	Macaca_fascicularis
ENSACLG00000017148	sall1a	99	67.797	ENSMMUG00000017200	SALL1	100	68.306	Macaca_mulatta
ENSACLG00000017148	sall1a	99	68.065	ENSMNEG00000034770	SALL1	100	68.145	Macaca_nemestrina
ENSACLG00000017148	sall1a	99	68.362	ENSMLEG00000036406	SALL1	100	68.661	Mandrillus_leucophaeus
ENSACLG00000017148	sall1a	99	93.037	ENSMAMG00000004164	sall1a	99	93.037	Mastacembelus_armatus
ENSACLG00000017148	sall1a	100	99.923	ENSMZEG00005006479	sall1a	100	99.923	Maylandia_zebra
ENSACLG00000017148	sall1a	100	68.912	ENSMGAG00000004704	SALL1	100	68.918	Meleagris_gallopavo
ENSACLG00000017148	sall1a	99	66.290	ENSMAUG00000019093	Sall1	100	66.541	Mesocricetus_auratus
ENSACLG00000017148	sall1a	100	67.667	ENSMICG00000036486	SALL1	100	67.793	Microcebus_murinus
ENSACLG00000017148	sall1a	99	91.258	ENSMMOG00000016400	sall1a	99	91.258	Mola_mola
ENSACLG00000017148	sall1a	99	68.876	ENSMODG00000013114	SALL1	99	69.046	Monodelphis_domestica
ENSACLG00000017148	sall1a	99	92.420	ENSMALG00000013400	sall1a	99	92.420	Monopterus_albus
ENSACLG00000017148	sall1a	99	66.122	MGP_CAROLIEiJ_G0031362	Sall1	100	66.469	Mus_caroli
ENSACLG00000017148	sall1a	99	65.924	ENSMUSG00000031665	Sall1	100	66.444	Mus_musculus
ENSACLG00000017148	sall1a	99	66.270	MGP_PahariEiJ_G0022961	Sall1	100	66.716	Mus_pahari
ENSACLG00000017148	sall1a	99	65.924	MGP_SPRETEiJ_G0032480	Sall1	100	66.444	Mus_spretus
ENSACLG00000017148	sall1a	100	66.990	ENSMPUG00000003265	SALL1	96	67.072	Mustela_putorius_furo
ENSACLG00000017148	sall1a	100	65.217	ENSMLUG00000015541	SALL1	99	66.080	Myotis_lucifugus
ENSACLG00000017148	sall1a	100	99.387	ENSNBRG00000009307	sall1a	100	99.387	Neolamprologus_brichardi
ENSACLG00000017148	sall1a	94	80.447	ENSNLEG00000001008	SALL1	99	80.000	Nomascus_leucogenys
ENSACLG00000017148	sall1a	99	68.947	ENSMEUG00000012206	SALL1	99	68.901	Notamacropus_eugenii
ENSACLG00000017148	sall1a	87	71.912	ENSOPRG00000005645	SALL1	71	71.681	Ochotona_princeps
ENSACLG00000017148	sall1a	99	67.643	ENSODEG00000003685	SALL1	100	67.766	Octodon_degus
ENSACLG00000017148	sall1a	100	98.927	ENSONIG00000002831	sall1a	100	98.927	Oreochromis_niloticus
ENSACLG00000017148	sall1a	100	59.938	ENSOANG00000013399	SALL1	96	76.230	Ornithorhynchus_anatinus
ENSACLG00000017148	sall1a	100	90.819	ENSORLG00000013827	sall1a	100	91.216	Oryzias_latipes
ENSACLG00000017148	sall1a	100	90.819	ENSORLG00020020570	sall1a	100	90.819	Oryzias_latipes_hni
ENSACLG00000017148	sall1a	100	90.669	ENSORLG00015018830	sall1a	100	91.132	Oryzias_latipes_hsok
ENSACLG00000017148	sall1a	100	90.669	ENSOMEG00000016043	sall1a	100	90.669	Oryzias_melastigma
ENSACLG00000017148	sall1a	99	67.862	ENSOGAG00000027316	SALL1	100	68.039	Otolemur_garnettii
ENSACLG00000017148	sall1a	100	63.521	ENSOARG00000017583	SALL1	100	63.889	Ovis_aries
ENSACLG00000017148	sall1a	99	49.962	ENSPPAG00000035136	-	99	49.441	Pan_paniscus
ENSACLG00000017148	sall1a	99	67.742	ENSPPAG00000035657	SALL1	100	68.345	Pan_paniscus
ENSACLG00000017148	sall1a	100	66.021	ENSPPRG00000023283	SALL1	100	66.542	Panthera_pardus
ENSACLG00000017148	sall1a	89	69.646	ENSPTIG00000013539	-	94	68.991	Panthera_tigris_altaica
ENSACLG00000017148	sall1a	99	50.000	ENSPTRG00000045256	-	99	49.924	Pan_troglodytes
ENSACLG00000017148	sall1a	99	67.865	ENSPTRG00000008108	SALL1	100	68.287	Pan_troglodytes
ENSACLG00000017148	sall1a	99	68.287	ENSPANG00000024176	SALL1	100	68.586	Papio_anubis
ENSACLG00000017148	sall1a	100	71.627	ENSPKIG00000022251	sall1a	100	71.645	Paramormyrops_kingsleyae
ENSACLG00000017148	sall1a	100	70.053	ENSPKIG00000005383	-	100	70.584	Paramormyrops_kingsleyae
ENSACLG00000017148	sall1a	100	69.300	ENSPSIG00000008582	SALL1	100	69.277	Pelodiscus_sinensis
ENSACLG00000017148	sall1a	99	86.056	ENSPMGG00000021788	sall1a	99	84.668	Periophthalmus_magnuspinnatus
ENSACLG00000017148	sall1a	99	49.048	ENSPMAG00000008148	sall1b	73	54.453	Petromyzon_marinus
ENSACLG00000017148	sall1a	99	69.069	ENSPCIG00000017840	SALL1	99	68.901	Phascolarctos_cinereus
ENSACLG00000017148	sall1a	100	91.509	ENSPFOG00000015799	sall1a	96	91.608	Poecilia_formosa
ENSACLG00000017148	sall1a	100	91.902	ENSPLAG00000022539	sall1a	100	91.902	Poecilia_latipinna
ENSACLG00000017148	sall1a	100	92.055	ENSPMEG00000020894	sall1a	100	92.055	Poecilia_mexicana
ENSACLG00000017148	sall1a	100	91.520	ENSPREG00000006802	sall1a	100	91.520	Poecilia_reticulata
ENSACLG00000017148	sall1a	90	66.751	ENSPPYG00000007345	SALL1	96	67.366	Pongo_abelii
ENSACLG00000017148	sall1a	85	70.370	ENSPCAG00000008162	SALL1	93	70.370	Procavia_capensis
ENSACLG00000017148	sall1a	99	67.492	ENSPCOG00000028192	SALL1	100	67.991	Propithecus_coquereli
ENSACLG00000017148	sall1a	72	69.364	ENSPVAG00000015374	SALL1	100	69.444	Pteropus_vampyrus
ENSACLG00000017148	sall1a	100	99.923	ENSPNYG00000010865	sall1a	100	99.923	Pundamilia_nyererei
ENSACLG00000017148	sall1a	99	53.263	ENSPNAG00000007442	sall1b	99	53.303	Pygocentrus_nattereri
ENSACLG00000017148	sall1a	100	78.370	ENSPNAG00000023644	sall1a	100	78.827	Pygocentrus_nattereri
ENSACLG00000017148	sall1a	99	66.517	ENSRNOG00000013907	Sall1	100	66.517	Rattus_norvegicus
ENSACLG00000017148	sall1a	99	67.742	ENSRBIG00000015707	SALL1	100	68.498	Rhinopithecus_bieti
ENSACLG00000017148	sall1a	99	67.742	ENSRROG00000035777	SALL1	100	68.498	Rhinopithecus_roxellana
ENSACLG00000017148	sall1a	99	68.039	ENSSBOG00000032186	SALL1	100	68.661	Saimiri_boliviensis_boliviensis
ENSACLG00000017148	sall1a	99	68.775	ENSSHAG00000009477	SALL1	99	68.548	Sarcophilus_harrisii
ENSACLG00000017148	sall1a	100	72.885	ENSSFOG00015020020	sall1a	100	72.810	Scleropages_formosus
ENSACLG00000017148	sall1a	100	71.801	ENSSFOG00015001590	sall1a	99	71.880	Scleropages_formosus
ENSACLG00000017148	sall1a	99	92.496	ENSSMAG00000009160	sall1a	99	92.496	Scophthalmus_maximus
ENSACLG00000017148	sall1a	76	57.143	ENSSDUG00000000748	sall1b	99	57.143	Seriola_dumerili
ENSACLG00000017148	sall1a	99	94.104	ENSSDUG00000006507	sall1a	99	94.104	Seriola_dumerili
ENSACLG00000017148	sall1a	99	94.028	ENSSLDG00000017721	sall1a	99	94.028	Seriola_lalandi_dorsalis
ENSACLG00000017148	sall1a	99	66.774	ENSSARG00000000661	SALL1	100	67.073	Sorex_araneus
ENSACLG00000017148	sall1a	100	68.647	ENSSPUG00000000156	SALL1	100	69.323	Sphenodon_punctatus
ENSACLG00000017148	sall1a	100	94.037	ENSSPAG00000021615	sall1a	100	94.037	Stegastes_partitus
ENSACLG00000017148	sall1a	99	66.935	ENSSSCG00000002836	SALL1	100	67.016	Sus_scrofa
ENSACLG00000017148	sall1a	100	69.225	ENSTGUG00000007514	SALL1	100	69.127	Taeniopygia_guttata
ENSACLG00000017148	sall1a	91	87.678	ENSTRUG00000008950	sall1a	100	87.678	Takifugu_rubripes
ENSACLG00000017148	sall1a	92	86.227	ENSTNIG00000004257	sall1a	100	86.227	Tetraodon_nigroviridis
ENSACLG00000017148	sall1a	78	77.241	ENSTBEG00000002119	-	53	76.712	Tupaia_belangeri
ENSACLG00000017148	sall1a	90	65.938	ENSUAMG00000023379	-	92	65.750	Ursus_americanus
ENSACLG00000017148	sall1a	90	65.968	ENSVVUG00000019383	-	99	66.387	Vulpes_vulpes
ENSACLG00000017148	sall1a	100	66.801	ENSXETG00000018417	sall1	100	65.348	Xenopus_tropicalis
ENSACLG00000017148	sall1a	86	61.538	ENSXETG00000017176	sall2	84	61.538	Xenopus_tropicalis
ENSACLG00000017148	sall1a	100	91.749	ENSXMAG00000016273	sall1a	100	91.749	Xiphophorus_maculatus