EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000017392 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 3317 bases
Position: chrLS419879.1:46244-49560
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000025551	RVT_1	PF00078.27	9.9e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000026161	-	3317	-	ENSACLP00000025551	1075 (aa)	-	-

Gene Model

Click here to download ENSACLG00000017392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000017392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000017392	-	99	98.416	ENSACLG00000019821	-	98	98.416
ENSACLG00000017392	-	92	98.191	ENSACLG00000002775	-	100	98.191
ENSACLG00000017392	-	73	98.855	ENSACLG00000023336	-	97	98.855
ENSACLG00000017392	-	86	97.845	ENSACLG00000009148	-	100	97.845
ENSACLG00000017392	-	100	99.164	ENSACLG00000003757	-	98	99.164
ENSACLG00000017392	-	71	98.825	ENSACLG00000005419	-	99	98.825
ENSACLG00000017392	-	71	98.423	ENSACLG00000027475	-	100	98.423
ENSACLG00000017392	-	71	98.549	ENSACLG00000006057	-	99	98.549
ENSACLG00000017392	-	100	99.349	ENSACLG00000014121	-	98	99.349
ENSACLG00000017392	-	95	99.119	ENSACLG00000016079	-	100	99.119
ENSACLG00000017392	-	100	98.885	ENSACLG00000007447	-	98	98.885
ENSACLG00000017392	-	86	98.921	ENSACLG00000018006	-	100	98.921
ENSACLG00000017392	-	95	99.411	ENSACLG00000017606	-	100	99.411
ENSACLG00000017392	-	100	98.885	ENSACLG00000009407	-	98	98.885
ENSACLG00000017392	-	70	98.529	ENSACLG00000017721	-	98	98.529
ENSACLG00000017392	-	100	99.349	ENSACLG00000022388	-	98	99.349
ENSACLG00000017392	-	95	98.626	ENSACLG00000021834	-	100	98.626
ENSACLG00000017392	-	77	97.473	ENSACLG00000021830	-	98	97.473
ENSACLG00000017392	-	100	99.164	ENSACLG00000019948	-	98	99.164
ENSACLG00000017392	-	86	98.599	ENSACLG00000025178	-	100	98.599
ENSACLG00000017392	-	78	97.971	ENSACLG00000021406	-	97	97.971
ENSACLG00000017392	-	87	99.042	ENSACLG00000013574	-	99	99.042
ENSACLG00000017392	-	86	98.707	ENSACLG00000003607	-	93	98.707
ENSACLG00000017392	-	73	99.237	ENSACLG00000014939	-	98	99.237
ENSACLG00000017392	-	100	99.072	ENSACLG00000013632	-	98	99.072
ENSACLG00000017392	-	81	99.314	ENSACLG00000016654	-	98	99.314
ENSACLG00000017392	-	95	98.528	ENSACLG00000013988	-	100	98.528
ENSACLG00000017392	-	100	97.305	ENSACLG00000007511	-	99	97.305
ENSACLG00000017392	-	81	98.048	ENSACLG00000013139	-	100	98.048
ENSACLG00000017392	-	100	98.792	ENSACLG00000002396	-	98	98.792
ENSACLG00000017392	-	93	96.909	ENSACLG00000013967	-	100	96.909
ENSACLG00000017392	-	71	98.285	ENSACLG00000004963	-	99	98.285
ENSACLG00000017392	-	77	99.515	ENSACLG00000022824	-	98	99.515
ENSACLG00000017392	-	100	99.349	ENSACLG00000011507	-	98	99.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000017392	-	79	32.605	ENSLACG00000012377	-	98	32.605	Latimeria_chalumnae
ENSACLG00000017392	-	60	39.637	ENSLACG00000004233	-	99	39.637	Latimeria_chalumnae
ENSACLG00000017392	-	51	34.326	ENSLACG00000016962	-	100	39.919	Latimeria_chalumnae
ENSACLG00000017392	-	74	37.761	ENSLACG00000013644	-	99	37.761	Latimeria_chalumnae
ENSACLG00000017392	-	60	45.385	ENSLACG00000012911	-	98	45.525	Latimeria_chalumnae
ENSACLG00000017392	-	52	36.585	ENSLACG00000004832	-	100	36.585	Latimeria_chalumnae
ENSACLG00000017392	-	56	34.984	ENSLACG00000006107	-	99	34.345	Latimeria_chalumnae
ENSACLG00000017392	-	89	98.531	ENSMZEG00005028496	-	96	98.531	Maylandia_zebra
ENSACLG00000017392	-	100	76.323	ENSORLG00000025841	-	99	76.323	Oryzias_latipes
ENSACLG00000017392	-	86	79.095	ENSORLG00000023099	-	100	79.095	Oryzias_latipes
ENSACLG00000017392	-	81	80.275	ENSORLG00000028072	-	100	80.275	Oryzias_latipes
ENSACLG00000017392	-	76	80.976	ENSORLG00000022216	-	100	80.976	Oryzias_latipes
ENSACLG00000017392	-	73	80.691	ENSORLG00000023528	-	99	80.691	Oryzias_latipes
ENSACLG00000017392	-	100	76.345	ENSORLG00000026631	-	99	76.345	Oryzias_latipes
ENSACLG00000017392	-	99	74.836	ENSORLG00000028428	-	94	74.836	Oryzias_latipes
ENSACLG00000017392	-	81	80.619	ENSORLG00000027125	-	100	80.619	Oryzias_latipes
ENSACLG00000017392	-	100	76.438	ENSORLG00000028038	-	99	76.438	Oryzias_latipes
ENSACLG00000017392	-	77	81.401	ENSORLG00000025660	-	99	81.401	Oryzias_latipes
ENSACLG00000017392	-	81	80.619	ENSORLG00020020895	-	100	80.619	Oryzias_latipes_hni
ENSACLG00000017392	-	97	75.816	ENSORLG00020004983	-	99	75.816	Oryzias_latipes_hni
ENSACLG00000017392	-	100	76.809	ENSORLG00020010783	-	99	76.809	Oryzias_latipes_hni
ENSACLG00000017392	-	81	80.390	ENSORLG00020020703	-	100	80.390	Oryzias_latipes_hni
ENSACLG00000017392	-	77	81.401	ENSORLG00020006197	-	99	81.401	Oryzias_latipes_hni
ENSACLG00000017392	-	99	77.486	ENSPREG00000022240	-	98	77.486	Poecilia_reticulata
ENSACLG00000017392	-	77	81.741	ENSXMAG00000021428	-	99	81.741	Xiphophorus_maculatus