EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000017606 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 3060 bases
Position: chr4:1800055-1803114
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000025855	RVT_1	PF00078.27	8.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000026468	-	3060	-	ENSACLP00000025855	1019 (aa)	-	-

Gene Model

Click here to download ENSACLG00000017606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000017606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000017606	-	74	98.681	ENSACLG00000004963	-	99	98.681
ENSACLG00000017606	-	74	98.681	ENSACLG00000006057	-	99	98.681
ENSACLG00000017606	-	80	99.389	ENSACLG00000016654	-	92	99.389
ENSACLG00000017606	-	100	99.607	ENSACLG00000022388	-	93	99.607
ENSACLG00000017606	-	100	99.019	ENSACLG00000013988	-	100	99.019
ENSACLG00000017606	-	100	99.215	ENSACLG00000009407	-	93	99.215
ENSACLG00000017606	-	100	97.645	ENSACLG00000007511	-	94	97.645
ENSACLG00000017606	-	72	99.314	ENSACLG00000014939	-	90	99.314
ENSACLG00000017606	-	100	99.314	ENSACLG00000013632	-	93	99.314
ENSACLG00000017606	-	91	99.353	ENSACLG00000018006	-	100	99.353
ENSACLG00000017606	-	91	99.030	ENSACLG00000025178	-	100	99.030
ENSACLG00000017606	-	100	99.706	ENSACLG00000011507	-	93	99.706
ENSACLG00000017606	-	99	98.623	ENSACLG00000019821	-	92	98.623
ENSACLG00000017606	-	100	99.509	ENSACLG00000003757	-	93	99.509
ENSACLG00000017606	-	75	99.217	ENSACLG00000005419	-	99	99.217
ENSACLG00000017606	-	82	98.329	ENSACLG00000021406	-	97	98.329
ENSACLG00000017606	-	100	99.411	ENSACLG00000017392	-	95	99.411
ENSACLG00000017606	-	75	98.686	ENSACLG00000027475	-	100	98.686
ENSACLG00000017606	-	100	99.706	ENSACLG00000014121	-	93	99.706
ENSACLG00000017606	-	100	98.822	ENSACLG00000002396	-	93	98.822
ENSACLG00000017606	-	98	98.593	ENSACLG00000002775	-	100	98.593
ENSACLG00000017606	-	100	99.215	ENSACLG00000007447	-	93	99.215
ENSACLG00000017606	-	82	97.593	ENSACLG00000021830	-	98	97.593
ENSACLG00000017606	-	100	99.019	ENSACLG00000021834	-	100	99.019
ENSACLG00000017606	-	92	99.468	ENSACLG00000013574	-	99	99.468
ENSACLG00000017606	-	100	99.313	ENSACLG00000019948	-	93	99.313
ENSACLG00000017606	-	85	98.393	ENSACLG00000013139	-	100	98.393
ENSACLG00000017606	-	91	98.276	ENSACLG00000009148	-	100	98.276
ENSACLG00000017606	-	73	98.930	ENSACLG00000017721	-	98	98.930
ENSACLG00000017606	-	75	99.609	ENSACLG00000022824	-	91	99.609
ENSACLG00000017606	-	91	99.138	ENSACLG00000003607	-	93	99.138
ENSACLG00000017606	-	98	97.308	ENSACLG00000013967	-	100	97.308
ENSACLG00000017606	-	72	98.903	ENSACLG00000023336	-	90	98.903
ENSACLG00000017606	-	100	99.314	ENSACLG00000016079	-	100	99.314

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000017606	-	59	34.824	ENSLACG00000006107	-	99	34.185	Latimeria_chalumnae
ENSACLG00000017606	-	53	34.446	ENSLACG00000016962	-	100	40.244	Latimeria_chalumnae
ENSACLG00000017606	-	63	39.637	ENSLACG00000004233	-	99	39.637	Latimeria_chalumnae
ENSACLG00000017606	-	78	37.884	ENSLACG00000013644	-	99	37.884	Latimeria_chalumnae
ENSACLG00000017606	-	55	36.760	ENSLACG00000004832	-	100	36.760	Latimeria_chalumnae
ENSACLG00000017606	-	63	45.385	ENSLACG00000012911	-	98	45.385	Latimeria_chalumnae
ENSACLG00000017606	-	84	32.773	ENSLACG00000012377	-	98	32.773	Latimeria_chalumnae
ENSACLG00000017606	-	94	98.846	ENSMZEG00005028496	-	96	98.846	Maylandia_zebra
ENSACLG00000017606	-	100	76.885	ENSORLG00000028038	-	94	76.885	Oryzias_latipes
ENSACLG00000017606	-	81	81.522	ENSORLG00000025660	-	99	81.522	Oryzias_latipes
ENSACLG00000017606	-	91	79.203	ENSORLG00000023099	-	100	79.203	Oryzias_latipes
ENSACLG00000017606	-	77	80.563	ENSORLG00000023528	-	99	80.563	Oryzias_latipes
ENSACLG00000017606	-	100	76.690	ENSORLG00000026631	-	94	76.690	Oryzias_latipes
ENSACLG00000017606	-	99	74.901	ENSORLG00000028428	-	89	74.901	Oryzias_latipes
ENSACLG00000017606	-	80	81.098	ENSORLG00000022216	-	100	81.098	Oryzias_latipes
ENSACLG00000017606	-	85	80.390	ENSORLG00000028072	-	100	80.390	Oryzias_latipes
ENSACLG00000017606	-	85	80.734	ENSORLG00000027125	-	100	80.734	Oryzias_latipes
ENSACLG00000017606	-	100	76.569	ENSORLG00000025841	-	94	76.569	Oryzias_latipes
ENSACLG00000017606	-	100	76.983	ENSORLG00020010783	-	94	76.983	Oryzias_latipes_hni
ENSACLG00000017606	-	85	80.734	ENSORLG00020020895	-	100	80.734	Oryzias_latipes_hni
ENSACLG00000017606	-	85	80.505	ENSORLG00020020703	-	100	80.505	Oryzias_latipes_hni
ENSACLG00000017606	-	81	81.522	ENSORLG00020006197	-	99	81.522	Oryzias_latipes_hni
ENSACLG00000017606	-	96	76.244	ENSORLG00020004983	-	93	76.244	Oryzias_latipes_hni
ENSACLG00000017606	-	100	77.963	ENSPREG00000022240	-	94	77.963	Poecilia_reticulata
ENSACLG00000017606	-	81	82.104	ENSXMAG00000021428	-	99	82.104	Xiphophorus_maculatus