EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000017818 (Gene tree)
Gene ID: 113034307
Gene Symbol: rasef
Alias: si:ch73-275j21.1
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 21398 bases
Position: chr12:15325703-15347100
Accession: 113034307
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000026213	MMR_HSR1	PF01926.23	8.9e-08	1	1
ENSACLP00000026243	MMR_HSR1	PF01926.23	8.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000026860	-	4963	-	ENSACLP00000026243	705 (aa)	XP_026044541	UPI000E419B3E
ENSACLT00000026830	-	5045	-	ENSACLP00000026213	705 (aa)	XP_026044541	UPI000E419B3E

Gene Model

Click here to download ENSACLG00000017818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000017818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000017818	rasef	72	41.206	ENSACLG00000013916	cracr2b	78	41.206
ENSACLG00000017818	rasef	70	63.687	ENSACLG00000021066	zgc:162879	76	63.687

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000017818	rasef	99	51.651	ENSG00000165105	RASEF	99	51.651	Homo_sapiens
ENSACLG00000017818	rasef	90	84.639	ENSAPOG00000024369	rasef	100	84.639	Acanthochromis_polyacanthus
ENSACLG00000017818	rasef	98	51.673	ENSAMEG00000009467	RASEF	98	51.807	Ailuropoda_melanoleuca
ENSACLG00000017818	rasef	96	79.765	ENSACIG00000005549	rasef	99	79.765	Amphilophus_citrinellus
ENSACLG00000017818	rasef	94	79.970	ENSAOCG00000011464	rasef	92	79.970	Amphiprion_ocellaris
ENSACLG00000017818	rasef	100	84.314	ENSAPEG00000003461	rasef	100	84.454	Amphiprion_percula
ENSACLG00000017818	rasef	95	83.481	ENSATEG00000015032	rasef	100	83.776	Anabas_testudineus
ENSACLG00000017818	rasef	86	53.846	ENSAPLG00000013969	RASEF	95	53.846	Anas_platyrhynchos
ENSACLG00000017818	rasef	97	54.039	ENSACAG00000002155	RASEF	97	54.039	Anolis_carolinensis
ENSACLG00000017818	rasef	99	51.715	ENSANAG00000035226	RASEF	99	51.715	Aotus_nancymaae
ENSACLG00000017818	rasef	98	57.953	ENSAMXG00000011411	rasef	97	57.953	Astyanax_mexicanus
ENSACLG00000017818	rasef	99	51.989	ENSBTAG00000021751	RASEF	98	52.122	Bos_taurus
ENSACLG00000017818	rasef	99	51.915	ENSCJAG00000003547	RASEF	99	51.915	Callithrix_jacchus
ENSACLG00000017818	rasef	97	55.296	ENSCAFG00000001453	RASEF	91	51.235	Canis_familiaris
ENSACLG00000017818	rasef	97	55.452	ENSCAFG00020023859	RASEF	99	52.042	Canis_lupus_dingo
ENSACLG00000017818	rasef	99	51.444	ENSCHIG00000020336	RASEF	97	55.414	Capra_hircus
ENSACLG00000017818	rasef	75	53.959	ENSTSYG00000006987	RASEF	99	53.959	Carlito_syrichta
ENSACLG00000017818	rasef	72	47.860	ENSCAPG00000010585	-	100	47.860	Cavia_aperea
ENSACLG00000017818	rasef	85	53.130	ENSCPOG00000005004	RASEF	99	53.130	Cavia_porcellus
ENSACLG00000017818	rasef	99	52.180	ENSCCAG00000031624	RASEF	99	52.180	Cebus_capucinus
ENSACLG00000017818	rasef	60	48.476	ENSCLAG00000004622	-	87	48.476	Chinchilla_lanigera
ENSACLG00000017818	rasef	99	51.989	ENSCSAG00000007663	RASEF	99	51.989	Chlorocebus_sabaeus
ENSACLG00000017818	rasef	84	54.426	ENSCHOG00000001831	RASEF	97	54.426	Choloepus_hoffmanni
ENSACLG00000017818	rasef	99	53.086	ENSCPBG00000019037	RASEF	99	53.361	Chrysemys_picta_bellii
ENSACLG00000017818	rasef	99	51.387	ENSCANG00000034081	RASEF	99	51.255	Colobus_angolensis_palliatus
ENSACLG00000017818	rasef	85	53.809	ENSCGRG00001001324	Rasef	99	53.809	Cricetulus_griseus_chok1gshd
ENSACLG00000017818	rasef	80	53.265	ENSCGRG00000006455	Rasef	99	53.265	Cricetulus_griseus_crigri
ENSACLG00000017818	rasef	91	69.183	ENSCSEG00000017898	rasef	92	69.290	Cynoglossus_semilaevis
ENSACLG00000017818	rasef	100	82.419	ENSCVAG00000006168	rasef	96	82.700	Cyprinodon_variegatus
ENSACLG00000017818	rasef	98	60.028	ENSDARG00000076250	rasef	98	60.028	Danio_rerio
ENSACLG00000017818	rasef	99	52.375	ENSDNOG00000006002	RASEF	90	52.375	Dasypus_novemcinctus
ENSACLG00000017818	rasef	79	53.590	ENSDORG00000015570	Rasef	99	53.509	Dipodomys_ordii
ENSACLG00000017818	rasef	99	42.761	ENSEBUG00000012629	rasef	99	42.895	Eptatretus_burgeri
ENSACLG00000017818	rasef	84	36.407	ENSEBUG00000012179	rasef	99	36.407	Eptatretus_burgeri
ENSACLG00000017818	rasef	99	53.857	ENSEASG00005015967	RASEF	99	53.857	Equus_asinus_asinus
ENSACLG00000017818	rasef	99	53.434	ENSECAG00000000324	RASEF	99	54.430	Equus_caballus
ENSACLG00000017818	rasef	81	50.344	ENSEEUG00000008455	RASEF	100	50.344	Erinaceus_europaeus
ENSACLG00000017818	rasef	99	51.190	ENSFCAG00000002416	RASEF	99	51.720	Felis_catus
ENSACLG00000017818	rasef	86	54.735	ENSFALG00000003611	RASEF	99	55.217	Ficedula_albicollis
ENSACLG00000017818	rasef	85	55.663	ENSFDAG00000013428	RASEF	99	55.663	Fukomys_damarensis
ENSACLG00000017818	rasef	100	73.633	ENSFHEG00000022470	rasef	95	73.633	Fundulus_heteroclitus
ENSACLG00000017818	rasef	84	86.127	ENSGMOG00000010090	rasef	100	84.270	Gadus_morhua
ENSACLG00000017818	rasef	99	51.617	ENSGALG00000012576	RASEF	97	53.586	Gallus_gallus
ENSACLG00000017818	rasef	100	81.435	ENSGAFG00000013735	rasef	97	81.435	Gambusia_affinis
ENSACLG00000017818	rasef	100	79.441	ENSGACG00000007528	rasef	100	79.441	Gasterosteus_aculeatus
ENSACLG00000017818	rasef	100	53.005	ENSGAGG00000007338	RASEF	99	53.279	Gopherus_agassizii
ENSACLG00000017818	rasef	99	51.519	ENSGGOG00000006651	RASEF	99	51.519	Gorilla_gorilla
ENSACLG00000017818	rasef	100	99.858	ENSHBUG00000010345	rasef	98	99.858	Haplochromis_burtoni
ENSACLG00000017818	rasef	99	51.946	ENSHGLG00000000399	RASEF	99	51.946	Heterocephalus_glaber_female
ENSACLG00000017818	rasef	85	54.677	ENSHGLG00100008043	RASEF	99	54.677	Heterocephalus_glaber_male
ENSACLG00000017818	rasef	99	65.007	ENSHCOG00000010976	rasef	99	65.007	Hippocampus_comes
ENSACLG00000017818	rasef	99	55.342	ENSIPUG00000008768	rasef	97	55.342	Ictalurus_punctatus
ENSACLG00000017818	rasef	95	52.342	ENSSTOG00000004311	RASEF	95	52.538	Ictidomys_tridecemlineatus
ENSACLG00000017818	rasef	85	55.592	ENSJJAG00000023215	Rasef	99	55.574	Jaculus_jaculus
ENSACLG00000017818	rasef	100	79.282	ENSKMAG00000021106	rasef	88	79.420	Kryptolebias_marmoratus
ENSACLG00000017818	rasef	95	80.636	ENSLBEG00000021098	-	99	70.756	Labrus_bergylta
ENSACLG00000017818	rasef	99	55.205	ENSLACG00000010849	RASEF	99	55.479	Latimeria_chalumnae
ENSACLG00000017818	rasef	99	60.581	ENSLOCG00000002094	rasef	99	60.581	Lepisosteus_oculatus
ENSACLG00000017818	rasef	86	55.395	ENSLAFG00000010552	RASEF	99	55.395	Loxodonta_africana
ENSACLG00000017818	rasef	99	51.387	ENSMFAG00000046414	RASEF	99	51.783	Macaca_fascicularis
ENSACLG00000017818	rasef	99	51.184	ENSMNEG00000044341	RASEF	99	51.579	Macaca_nemestrina
ENSACLG00000017818	rasef	99	51.387	ENSMLEG00000034579	RASEF	99	51.783	Mandrillus_leucophaeus
ENSACLG00000017818	rasef	87	83.226	ENSMAMG00000001536	rasef	97	83.387	Mastacembelus_armatus
ENSACLG00000017818	rasef	96	84.125	ENSMZEG00005004819	rasef	99	84.125	Maylandia_zebra
ENSACLG00000017818	rasef	85	54.839	ENSMAUG00000010820	Rasef	99	54.839	Mesocricetus_auratus
ENSACLG00000017818	rasef	98	51.548	ENSMICG00000011836	RASEF	99	52.116	Microcebus_murinus
ENSACLG00000017818	rasef	86	54.080	ENSMOCG00000000943	Rasef	99	53.701	Microtus_ochrogaster
ENSACLG00000017818	rasef	95	72.917	ENSMMOG00000000102	rasef	97	72.917	Mola_mola
ENSACLG00000017818	rasef	99	51.587	ENSMODG00000009037	RASEF	99	51.984	Monodelphis_domestica
ENSACLG00000017818	rasef	100	76.653	ENSMALG00000009830	rasef	100	76.653	Monopterus_albus
ENSACLG00000017818	rasef	87	54.286	MGP_CAROLIEiJ_G0026109	Rasef	99	54.561	Mus_caroli
ENSACLG00000017818	rasef	99	53.783	ENSMUSG00000043003	Rasef	99	54.733	Mus_musculus
ENSACLG00000017818	rasef	85	54.677	MGP_PahariEiJ_G0028447	Rasef	99	54.561	Mus_pahari
ENSACLG00000017818	rasef	86	54.750	MGP_SPRETEiJ_G0027075	Rasef	99	54.561	Mus_spretus
ENSACLG00000017818	rasef	80	53.265	ENSMPUG00000013070	RASEF	99	53.265	Mustela_putorius_furo
ENSACLG00000017818	rasef	99	51.451	ENSMLUG00000013108	RASEF	99	51.783	Myotis_lucifugus
ENSACLG00000017818	rasef	80	55.155	ENSNGAG00000014878	Rasef	99	55.155	Nannospalax_galili
ENSACLG00000017818	rasef	95	73.824	ENSNBRG00000012335	rasef	99	73.824	Neolamprologus_brichardi
ENSACLG00000017818	rasef	99	51.255	ENSNLEG00000003245	RASEF	99	51.651	Nomascus_leucogenys
ENSACLG00000017818	rasef	99	49.735	ENSMEUG00000016412	RASEF	99	50.000	Notamacropus_eugenii
ENSACLG00000017818	rasef	85	50.000	ENSOPRG00000002742	-	80	50.000	Ochotona_princeps
ENSACLG00000017818	rasef	100	98.298	ENSONIG00000015021	rasef	97	98.298	Oreochromis_niloticus
ENSACLG00000017818	rasef	97	50.943	ENSOANG00000010379	RASEF	96	50.943	Ornithorhynchus_anatinus
ENSACLG00000017818	rasef	99	50.593	ENSOCUG00000001548	RASEF	99	50.593	Oryctolagus_cuniculus
ENSACLG00000017818	rasef	100	79.044	ENSORLG00000005076	rasef	96	80.028	Oryzias_latipes
ENSACLG00000017818	rasef	100	78.903	ENSORLG00020020049	rasef	96	79.887	Oryzias_latipes_hni
ENSACLG00000017818	rasef	100	78.903	ENSORLG00015008479	rasef	96	79.887	Oryzias_latipes_hsok
ENSACLG00000017818	rasef	100	80.169	ENSOMEG00000023457	rasef	99	82.153	Oryzias_melastigma
ENSACLG00000017818	rasef	86	55.627	ENSOGAG00000012724	RASEF	99	55.627	Otolemur_garnettii
ENSACLG00000017818	rasef	99	51.847	ENSOARG00000009073	RASEF	93	51.979	Ovis_aries
ENSACLG00000017818	rasef	99	52.933	ENSPPAG00000042152	RASEF	99	53.070	Pan_paniscus
ENSACLG00000017818	rasef	99	50.988	ENSPPRG00000008487	RASEF	99	51.515	Panthera_pardus
ENSACLG00000017818	rasef	89	55.140	ENSPTIG00000006676	RASEF	96	53.519	Panthera_tigris_altaica
ENSACLG00000017818	rasef	99	52.933	ENSPTRG00000021052	RASEF	99	53.070	Pan_troglodytes
ENSACLG00000017818	rasef	99	51.915	ENSPANG00000024899	RASEF	99	51.783	Papio_anubis
ENSACLG00000017818	rasef	89	53.560	ENSPSIG00000017699	RASEF	97	53.231	Pelodiscus_sinensis
ENSACLG00000017818	rasef	100	58.832	ENSPMGG00000015499	rasef	86	92.157	Periophthalmus_magnuspinnatus
ENSACLG00000017818	rasef	85	54.355	ENSPEMG00000002797	Rasef	99	54.355	Peromyscus_maniculatus_bairdii
ENSACLG00000017818	rasef	94	39.808	ENSPMAG00000001634	rasef	98	40.356	Petromyzon_marinus
ENSACLG00000017818	rasef	99	52.444	ENSPCIG00000027655	RASEF	99	52.444	Phascolarctos_cinereus
ENSACLG00000017818	rasef	99	76.518	ENSPFOG00000018924	rasef	99	76.518	Poecilia_formosa
ENSACLG00000017818	rasef	86	71.358	ENSPLAG00000022907	RASEF	97	71.358	Poecilia_latipinna
ENSACLG00000017818	rasef	100	82.560	ENSPMEG00000006546	rasef	100	82.560	Poecilia_mexicana
ENSACLG00000017818	rasef	100	81.575	ENSPREG00000018728	rasef	95	81.575	Poecilia_reticulata
ENSACLG00000017818	rasef	99	51.519	ENSPPYG00000019320	RASEF	99	51.651	Pongo_abelii
ENSACLG00000017818	rasef	99	51.511	ENSPCOG00000022979	RASEF	99	51.905	Propithecus_coquereli
ENSACLG00000017818	rasef	99	50.926	ENSPVAG00000003682	RASEF	99	51.323	Pteropus_vampyrus
ENSACLG00000017818	rasef	99	90.374	ENSPNYG00000010579	rasef	96	90.374	Pundamilia_nyererei
ENSACLG00000017818	rasef	99	57.163	ENSPNAG00000016447	rasef	99	57.163	Pygocentrus_nattereri
ENSACLG00000017818	rasef	99	52.348	ENSRNOG00000024190	Rasef	99	52.348	Rattus_norvegicus
ENSACLG00000017818	rasef	99	51.651	ENSRBIG00000039516	RASEF	99	51.519	Rhinopithecus_bieti
ENSACLG00000017818	rasef	95	53.241	ENSRROG00000044397	RASEF	99	53.103	Rhinopithecus_roxellana
ENSACLG00000017818	rasef	99	50.727	ENSSBOG00000029298	RASEF	99	50.727	Saimiri_boliviensis_boliviensis
ENSACLG00000017818	rasef	99	58.197	ENSSFOG00015009014	rasef	99	58.197	Scleropages_formosus
ENSACLG00000017818	rasef	99	82.893	ENSSMAG00000000942	rasef	99	82.893	Scophthalmus_maximus
ENSACLG00000017818	rasef	85	79.779	ENSSDUG00000022228	rasef	95	79.779	Seriola_dumerili
ENSACLG00000017818	rasef	100	82.841	ENSSLDG00000001784	rasef	93	83.122	Seriola_lalandi_dorsalis
ENSACLG00000017818	rasef	99	51.934	ENSSPUG00000002899	RASEF	99	51.934	Sphenodon_punctatus
ENSACLG00000017818	rasef	100	84.232	ENSSPAG00000002442	rasef	96	84.371	Stegastes_partitus
ENSACLG00000017818	rasef	88	56.094	ENSSSCG00000040707	-	93	56.094	Sus_scrofa
ENSACLG00000017818	rasef	99	51.752	ENSTGUG00000003216	RASEF	99	52.156	Taeniopygia_guttata
ENSACLG00000017818	rasef	99	80.367	ENSTRUG00000011541	rasef	99	80.367	Takifugu_rubripes
ENSACLG00000017818	rasef	99	70.822	ENSTNIG00000006010	rasef	99	70.822	Tetraodon_nigroviridis
ENSACLG00000017818	rasef	99	46.702	ENSTTRG00000002061	RASEF	99	46.966	Tursiops_truncatus
ENSACLG00000017818	rasef	99	52.646	ENSUAMG00000021591	RASEF	97	54.735	Ursus_americanus
ENSACLG00000017818	rasef	86	54.735	ENSUMAG00000004670	RASEF	94	54.735	Ursus_maritimus
ENSACLG00000017818	rasef	87	54.088	ENSVVUG00000029736	RASEF	97	54.400	Vulpes_vulpes
ENSACLG00000017818	rasef	99	50.943	ENSXETG00000016758	mgc147600	99	50.943	Xenopus_tropicalis
ENSACLG00000017818	rasef	81	65.729	ENSXCOG00000005178	rasef	84	65.729	Xiphophorus_couchianus
ENSACLG00000017818	rasef	100	81.857	ENSXMAG00000015129	rasef	100	81.857	Xiphophorus_maculatus