EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000018006 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 3120 bases
Position: chr20:6368390-6371509
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000026469	RVT_1	PF00078.27	4.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000027090	-	3120	-	ENSACLP00000026469	927 (aa)	-	-

Gene Model

Click here to download ENSACLG00000018006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000018006	-	100	98.921	ENSACLG00000017392	-	86	98.921
ENSACLG00000018006	-	100	99.029	ENSACLG00000019948	-	85	99.029
ENSACLG00000018006	-	100	98.815	ENSACLG00000025178	-	100	98.815
ENSACLG00000018006	-	82	98.686	ENSACLG00000027475	-	100	98.686
ENSACLG00000018006	-	99	98.259	ENSACLG00000002775	-	92	98.259
ENSACLG00000018006	-	100	99.353	ENSACLG00000017606	-	91	99.353
ENSACLG00000018006	-	100	98.921	ENSACLG00000003607	-	93	98.921
ENSACLG00000018006	-	100	98.813	ENSACLG00000013988	-	91	98.813
ENSACLG00000018006	-	100	99.245	ENSACLG00000014121	-	85	99.245
ENSACLG00000018006	-	99	98.270	ENSACLG00000019821	-	84	98.270
ENSACLG00000018006	-	90	97.852	ENSACLG00000021406	-	97	97.852
ENSACLG00000018006	-	83	99.086	ENSACLG00000005419	-	99	99.086
ENSACLG00000018006	-	100	99.245	ENSACLG00000011507	-	85	99.245
ENSACLG00000018006	-	100	97.845	ENSACLG00000009148	-	100	97.845
ENSACLG00000018006	-	100	99.029	ENSACLG00000007447	-	85	99.029
ENSACLG00000018006	-	69	99.215	ENSACLG00000014939	-	79	99.215
ENSACLG00000018006	-	100	99.245	ENSACLG00000013574	-	99	99.245
ENSACLG00000018006	-	73	99.259	ENSACLG00000022824	-	80	99.259
ENSACLG00000018006	-	81	98.797	ENSACLG00000017721	-	98	98.797
ENSACLG00000018006	-	100	98.921	ENSACLG00000009407	-	85	98.921
ENSACLG00000018006	-	100	97.087	ENSACLG00000007511	-	85	97.087
ENSACLG00000018006	-	69	99.215	ENSACLG00000023336	-	79	99.215
ENSACLG00000018006	-	100	99.139	ENSACLG00000013632	-	85	99.139
ENSACLG00000018006	-	82	98.549	ENSACLG00000006057	-	99	98.549
ENSACLG00000018006	-	78	99.449	ENSACLG00000016654	-	81	99.449
ENSACLG00000018006	-	82	98.549	ENSACLG00000004963	-	99	98.549
ENSACLG00000018006	-	100	99.031	ENSACLG00000016079	-	91	99.031
ENSACLG00000018006	-	100	97.087	ENSACLG00000013967	-	92	97.087
ENSACLG00000018006	-	100	98.706	ENSACLG00000021834	-	91	98.706
ENSACLG00000018006	-	90	97.353	ENSACLG00000021830	-	98	97.353
ENSACLG00000018006	-	94	98.163	ENSACLG00000013139	-	100	98.163
ENSACLG00000018006	-	100	98.490	ENSACLG00000002396	-	85	98.490
ENSACLG00000018006	-	100	99.029	ENSACLG00000003757	-	85	99.029
ENSACLG00000018006	-	100	99.353	ENSACLG00000022388	-	85	99.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018006	-	69	39.637	ENSLACG00000004233	-	99	39.637	Latimeria_chalumnae
ENSACLG00000018006	-	52	31.873	ENSLACG00000001539	-	99	31.673	Latimeria_chalumnae
ENSACLG00000018006	-	52	34.455	ENSLACG00000005758	-	90	44.130	Latimeria_chalumnae
ENSACLG00000018006	-	70	45.385	ENSLACG00000012911	-	98	45.385	Latimeria_chalumnae
ENSACLG00000018006	-	86	38.130	ENSLACG00000013644	-	99	38.130	Latimeria_chalumnae
ENSACLG00000018006	-	65	35.144	ENSLACG00000006107	-	99	34.505	Latimeria_chalumnae
ENSACLG00000018006	-	60	36.934	ENSLACG00000004832	-	100	36.934	Latimeria_chalumnae
ENSACLG00000018006	-	54	32.068	ENSLACG00000013633	-	94	30.632	Latimeria_chalumnae
ENSACLG00000018006	-	59	34.622	ENSLACG00000016962	-	100	40.244	Latimeria_chalumnae
ENSACLG00000018006	-	99	98.584	ENSMZEG00005028496	-	93	98.584	Maylandia_zebra
ENSACLG00000018006	-	94	80.275	ENSORLG00000028072	-	100	80.275	Oryzias_latipes
ENSACLG00000018006	-	100	79.203	ENSORLG00000026631	-	86	79.203	Oryzias_latipes
ENSACLG00000018006	-	99	77.149	ENSORLG00000028428	-	81	77.149	Oryzias_latipes
ENSACLG00000018006	-	100	78.987	ENSORLG00000025841	-	86	78.987	Oryzias_latipes
ENSACLG00000018006	-	89	81.401	ENSORLG00000025660	-	99	81.401	Oryzias_latipes
ENSACLG00000018006	-	88	80.976	ENSORLG00000022216	-	100	80.976	Oryzias_latipes
ENSACLG00000018006	-	84	80.435	ENSORLG00000023528	-	99	80.435	Oryzias_latipes
ENSACLG00000018006	-	94	80.619	ENSORLG00000027125	-	100	80.619	Oryzias_latipes
ENSACLG00000018006	-	100	79.095	ENSORLG00000023099	-	100	79.095	Oryzias_latipes
ENSACLG00000018006	-	100	79.310	ENSORLG00000028038	-	86	79.310	Oryzias_latipes
ENSACLG00000018006	-	94	80.390	ENSORLG00020020703	-	100	80.390	Oryzias_latipes_hni
ENSACLG00000018006	-	89	81.401	ENSORLG00020006197	-	99	81.401	Oryzias_latipes_hni
ENSACLG00000018006	-	96	78.812	ENSORLG00020004983	-	85	78.812	Oryzias_latipes_hni
ENSACLG00000018006	-	94	80.619	ENSORLG00020020895	-	100	80.619	Oryzias_latipes_hni
ENSACLG00000018006	-	100	79.203	ENSORLG00020010783	-	86	79.203	Oryzias_latipes_hni
ENSACLG00000018006	-	100	79.634	ENSPREG00000022240	-	86	79.634	Poecilia_reticulata
ENSACLG00000018006	-	89	81.983	ENSXMAG00000021428	-	99	81.983	Xiphophorus_maculatus