EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000018221 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 5450 bases
Position: chr1:30671682-30677131
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000026786	SM-ATX	PF14438.6	3e-08	1	1
ENSACLP00000026786	LSM14	PF12701.7	1.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000027416	-	306	-	ENSACLP00000026786	101 (aa)	-	-

Gene Model

Click here to download ENSACLG00000018221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018221's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018221	-	82	92.771	ENSG00000257103	LSM14A	81	92.771	Homo_sapiens
ENSACLG00000018221	-	82	87.952	ENSAPEG00000012119	lsm14aa	80	87.952	Amphiprion_percula
ENSACLG00000018221	-	78	77.215	ENSANAG00000031175	-	79	77.215	Aotus_nancymaae
ENSACLG00000018221	-	82	92.771	ENSANAG00000019299	-	81	92.771	Aotus_nancymaae
ENSACLG00000018221	-	82	92.771	ENSCJAG00000010360	LSM14A	81	92.771	Callithrix_jacchus
ENSACLG00000018221	-	81	78.049	ENSCCAG00000037290	-	75	78.049	Cebus_capucinus
ENSACLG00000018221	-	82	90.361	ENSCCAG00000028536	-	83	90.361	Cebus_capucinus
ENSACLG00000018221	-	82	83.133	ENSCCAG00000038098	-	82	83.133	Cebus_capucinus
ENSACLG00000018221	-	76	94.805	ENSCSEG00000021457	lsm14aa	77	92.405	Cynoglossus_semilaevis
ENSACLG00000018221	-	82	91.566	ENSDARG00000006600	lsm14aa	92	94.872	Danio_rerio
ENSACLG00000018221	-	83	91.667	ENSGAGG00000016098	-	77	91.667	Gopherus_agassizii
ENSACLG00000018221	-	83	89.286	ENSHGLG00100017085	-	84	89.286	Heterocephalus_glaber_male
ENSACLG00000018221	-	82	92.771	ENSHGLG00100000160	-	65	92.771	Heterocephalus_glaber_male
ENSACLG00000018221	-	78	91.139	ENSHCOG00000009227	-	78	91.139	Hippocampus_comes
ENSACLG00000018221	-	89	89.011	ENSHCOG00000001089	-	92	89.011	Hippocampus_comes
ENSACLG00000018221	-	82	92.771	ENSLBEG00000010487	lsm14aa	72	91.667	Labrus_bergylta
ENSACLG00000018221	-	80	98.765	ENSMZEG00005005945	-	58	98.765	Maylandia_zebra
ENSACLG00000018221	-	76	94.805	ENSMMOG00000016341	-	88	94.805	Mola_mola
ENSACLG00000018221	-	86	81.609	ENSNLEG00000034705	-	71	81.609	Nomascus_leucogenys
ENSACLG00000018221	-	84	92.941	ENSORLG00000028980	-	68	96.296	Oryzias_latipes
ENSACLG00000018221	-	80	96.296	ENSORLG00020019931	-	68	96.296	Oryzias_latipes_hni
ENSACLG00000018221	-	68	56.000	ENSORLG00015018292	-	70	56.000	Oryzias_latipes_hsok
ENSACLG00000018221	-	80	91.358	ENSOMEG00000016637	-	50	91.358	Oryzias_melastigma
ENSACLG00000018221	-	82	92.771	ENSPTRG00000040949	-	85	92.771	Pan_troglodytes
ENSACLG00000018221	-	94	81.308	ENSPMGG00000007198	-	100	81.308	Periophthalmus_magnuspinnatus
ENSACLG00000018221	-	85	90.698	ENSPMGG00000000220	lsm14aa	83	90.698	Periophthalmus_magnuspinnatus
ENSACLG00000018221	-	72	93.151	ENSPCOG00000016240	-	78	93.151	Propithecus_coquereli
ENSACLG00000018221	-	81	81.707	ENSSBOG00000021178	-	57	81.707	Saimiri_boliviensis_boliviensis
ENSACLG00000018221	-	82	77.108	ENSSBOG00000023312	-	81	77.108	Saimiri_boliviensis_boliviensis
ENSACLG00000018221	-	82	92.771	ENSSBOG00000020141	-	81	92.771	Saimiri_boliviensis_boliviensis
ENSACLG00000018221	-	76	94.805	ENSTRUG00000024267	-	53	94.805	Takifugu_rubripes
ENSACLG00000018221	-	82	92.771	ENSUAMG00000017314	LSM14A	74	91.667	Ursus_americanus
ENSACLG00000018221	-	92	64.516	ENSUMAG00000004345	-	94	64.516	Ursus_maritimus