EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000018260 (Gene tree)
Gene ID: 113020535
Gene Symbol: elavl3
Alias: elav-related C|elavC|elrc|etID309927.3|huc|id:ibd1248|wu:fb77b03|zHuC
Full Name: ELAV like neuron-specific RNA binding protein 3
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 9422 bases
Position: chr4:10433288-10442709
Accession: ZDB-GENE-980526-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000026863	RRM_5	PF13893.6	2.2e-12	1	2
ENSACLP00000026863	RRM_5	PF13893.6	2.2e-12	2	2
ENSACLP00000026863	RRM_1	PF00076.22	1.7e-64	1	3
ENSACLP00000026863	RRM_1	PF00076.22	1.7e-64	2	3
ENSACLP00000026863	RRM_1	PF00076.22	1.7e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000027493	-	1038	-	ENSACLP00000026863	345 (aa)	-	-

Gene Model

Click here to download ENSACLG00000018260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000018260	elavl3	80	41.489	ENSACLG00000010181	-	61	41.489
ENSACLG00000018260	elavl3	90	67.846	ENSACLG00000019504	-	92	68.167
ENSACLG00000018260	elavl3	77	41.304	ENSACLG00000013768	-	62	41.304
ENSACLG00000018260	elavl3	89	30.719	ENSACLG00000014335	pabpc1b	59	30.719
ENSACLG00000018260	elavl3	99	83.380	ENSACLG00000002786	elavl4	96	80.435
ENSACLG00000018260	elavl3	79	43.023	ENSACLG00000003085	-	62	42.553
ENSACLG00000018260	elavl3	85	41.860	ENSACLG00000011828	celf4	74	34.375
ENSACLG00000018260	elavl3	90	73.871	ENSACLG00000009328	elavl1a	95	72.581
ENSACLG00000018260	elavl3	89	40.698	ENSACLG00000016215	si:dkey-205h23.2	65	40.698
ENSACLG00000018260	elavl3	66	36.667	ENSACLG00000002393	rbms2a	75	36.667
ENSACLG00000018260	elavl3	74	41.860	ENSACLG00000020342	celf3b	57	41.860
ENSACLG00000018260	elavl3	74	41.860	ENSACLG00000009631	celf3a	51	41.860
ENSACLG00000018260	elavl3	99	78.846	ENSACLG00000002715	ELAVL2	94	78.846
ENSACLG00000018260	elavl3	55	32.821	ENSACLG00000021512	rbms1a	60	32.093
ENSACLG00000018260	elavl3	89	40.698	ENSACLG00000023709	celf5a	51	40.698

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018260	elavl3	99	85.955	ENSG00000196361	ELAVL3	99	87.079	Homo_sapiens
ENSACLG00000018260	elavl3	99	100.000	ENSAPOG00000017565	elavl3	99	100.000	Acanthochromis_polyacanthus
ENSACLG00000018260	elavl3	100	85.515	ENSAMEG00000010487	ELAVL3	100	86.630	Ailuropoda_melanoleuca
ENSACLG00000018260	elavl3	99	100.000	ENSACIG00000024190	elavl3	99	100.000	Amphilophus_citrinellus
ENSACLG00000018260	elavl3	100	99.711	ENSAOCG00000005054	elavl3	100	99.711	Amphiprion_ocellaris
ENSACLG00000018260	elavl3	100	100.000	ENSAPEG00000011145	elavl3	100	100.000	Amphiprion_percula
ENSACLG00000018260	elavl3	98	100.000	ENSATEG00000020941	elavl3	99	100.000	Anabas_testudineus
ENSACLG00000018260	elavl3	98	89.167	ENSACAG00000016958	ELAVL3	93	89.167	Anolis_carolinensis
ENSACLG00000018260	elavl3	100	85.794	ENSANAG00000030798	ELAVL3	100	86.908	Aotus_nancymaae
ENSACLG00000018260	elavl3	100	97.971	ENSAMXG00000040498	elavl3	100	97.971	Astyanax_mexicanus
ENSACLG00000018260	elavl3	99	86.236	ENSBTAG00000014412	ELAVL3	100	86.872	Bos_taurus
ENSACLG00000018260	elavl3	99	84.298	ENSCJAG00000005589	ELAVL3	99	85.399	Callithrix_jacchus
ENSACLG00000018260	elavl3	99	84.298	ENSCAFG00000017350	ELAVL3	99	85.399	Canis_familiaris
ENSACLG00000018260	elavl3	100	88.728	ENSCAFG00020004614	ELAVL3	96	91.343	Canis_lupus_dingo
ENSACLG00000018260	elavl3	99	84.573	ENSCHIG00000003436	ELAVL3	99	85.675	Capra_hircus
ENSACLG00000018260	elavl3	100	83.880	ENSTSYG00000036621	ELAVL3	100	84.973	Carlito_syrichta
ENSACLG00000018260	elavl3	89	70.988	ENSCAPG00000017620	ELAVL3	99	72.222	Cavia_aperea
ENSACLG00000018260	elavl3	89	70.988	ENSCPOG00000001793	ELAVL3	99	72.222	Cavia_porcellus
ENSACLG00000018260	elavl3	99	85.714	ENSCCAG00000034350	ELAVL3	99	86.835	Cebus_capucinus
ENSACLG00000018260	elavl3	99	84.298	ENSCATG00000044086	ELAVL3	99	85.399	Cercocebus_atys
ENSACLG00000018260	elavl3	99	84.022	ENSCLAG00000016404	ELAVL3	99	85.124	Chinchilla_lanigera
ENSACLG00000018260	elavl3	96	91.304	ENSCSAG00000006755	ELAVL3	100	91.304	Chlorocebus_sabaeus
ENSACLG00000018260	elavl3	99	92.711	ENSCPBG00000023982	ELAVL3	99	89.326	Chrysemys_picta_bellii
ENSACLG00000018260	elavl3	99	85.237	ENSCANG00000038728	ELAVL3	100	86.351	Colobus_angolensis_palliatus
ENSACLG00000018260	elavl3	99	83.747	ENSCGRG00001018927	Elavl3	99	84.848	Cricetulus_griseus_chok1gshd
ENSACLG00000018260	elavl3	99	83.747	ENSCGRG00000007158	Elavl3	99	84.848	Cricetulus_griseus_crigri
ENSACLG00000018260	elavl3	100	98.261	ENSCSEG00000021095	elavl3	100	98.261	Cynoglossus_semilaevis
ENSACLG00000018260	elavl3	100	99.420	ENSCVAG00000014060	elavl3	100	99.420	Cyprinodon_variegatus
ENSACLG00000018260	elavl3	100	99.420	ENSDARG00000014420	elavl3	100	99.420	Danio_rerio
ENSACLG00000018260	elavl3	99	84.270	ENSDORG00000002538	Elavl3	99	85.393	Dipodomys_ordii
ENSACLG00000018260	elavl3	99	84.298	ENSEASG00005004561	ELAVL3	99	85.399	Equus_asinus_asinus
ENSACLG00000018260	elavl3	98	89.971	ENSECAG00000020594	ELAVL3	100	91.150	Equus_caballus
ENSACLG00000018260	elavl3	98	97.688	ENSELUG00000023043	elavl3	98	97.688	Esox_lucius
ENSACLG00000018260	elavl3	99	84.298	ENSFCAG00000024763	ELAVL3	99	85.399	Felis_catus
ENSACLG00000018260	elavl3	99	86.550	ENSFDAG00000008449	ELAVL3	99	86.550	Fukomys_damarensis
ENSACLG00000018260	elavl3	100	99.420	ENSFHEG00000001675	elavl3	100	99.420	Fundulus_heteroclitus
ENSACLG00000018260	elavl3	100	95.810	ENSGMOG00000003760	elavl3	100	95.810	Gadus_morhua
ENSACLG00000018260	elavl3	50	62.500	ENSGALG00000054488	-	77	63.636	Gallus_gallus
ENSACLG00000018260	elavl3	58	76.378	ENSGALG00000047364	-	100	76.378	Gallus_gallus
ENSACLG00000018260	elavl3	99	96.338	ENSGAFG00000016015	elavl3	98	96.338	Gambusia_affinis
ENSACLG00000018260	elavl3	99	97.421	ENSGACG00000013839	elavl3	99	97.421	Gasterosteus_aculeatus
ENSACLG00000018260	elavl3	83	91.810	ENSGAGG00000016141	ELAVL3	95	91.810	Gopherus_agassizii
ENSACLG00000018260	elavl3	99	84.298	ENSGGOG00000008635	ELAVL3	99	85.399	Gorilla_gorilla
ENSACLG00000018260	elavl3	100	100.000	ENSHBUG00000020978	elavl3	100	100.000	Haplochromis_burtoni
ENSACLG00000018260	elavl3	83	67.361	ENSHGLG00000019379	-	97	67.361	Heterocephalus_glaber_female
ENSACLG00000018260	elavl3	99	84.298	ENSHGLG00000015199	ELAVL3	100	84.932	Heterocephalus_glaber_female
ENSACLG00000018260	elavl3	94	82.609	ENSHGLG00100011200	ELAVL3	99	83.768	Heterocephalus_glaber_male
ENSACLG00000018260	elavl3	100	97.443	ENSHCOG00000015894	elavl3	100	97.443	Hippocampus_comes
ENSACLG00000018260	elavl3	99	98.834	ENSIPUG00000013002	elavl3	98	98.834	Ictalurus_punctatus
ENSACLG00000018260	elavl3	99	84.298	ENSSTOG00000021111	ELAVL3	99	85.399	Ictidomys_tridecemlineatus
ENSACLG00000018260	elavl3	99	85.124	ENSJJAG00000023513	Elavl3	99	85.124	Jaculus_jaculus
ENSACLG00000018260	elavl3	99	100.000	ENSKMAG00000017412	elavl3	99	100.000	Kryptolebias_marmoratus
ENSACLG00000018260	elavl3	100	99.130	ENSLBEG00000008073	elavl3	99	99.130	Labrus_bergylta
ENSACLG00000018260	elavl3	100	92.877	ENSLOCG00000007647	elavl3	100	92.877	Lepisosteus_oculatus
ENSACLG00000018260	elavl3	100	83.651	ENSLAFG00000005013	ELAVL3	99	84.741	Loxodonta_africana
ENSACLG00000018260	elavl3	99	85.714	ENSMFAG00000003692	ELAVL3	99	86.835	Macaca_fascicularis
ENSACLG00000018260	elavl3	99	85.714	ENSMMUG00000020616	ELAVL3	99	86.835	Macaca_mulatta
ENSACLG00000018260	elavl3	99	85.714	ENSMNEG00000043973	ELAVL3	100	86.351	Macaca_nemestrina
ENSACLG00000018260	elavl3	97	82.857	ENSMLEG00000013976	ELAVL3	100	82.857	Mandrillus_leucophaeus
ENSACLG00000018260	elavl3	99	99.415	ENSMAMG00000011697	elavl3	99	99.415	Mastacembelus_armatus
ENSACLG00000018260	elavl3	100	100.000	ENSMZEG00005019053	elavl3	100	100.000	Maylandia_zebra
ENSACLG00000018260	elavl3	99	83.747	ENSMAUG00000016478	Elavl3	99	84.848	Mesocricetus_auratus
ENSACLG00000018260	elavl3	100	83.967	ENSMICG00000016528	ELAVL3	100	85.054	Microcebus_murinus
ENSACLG00000018260	elavl3	99	83.747	ENSMOCG00000002046	Elavl3	99	84.848	Microtus_ochrogaster
ENSACLG00000018260	elavl3	99	100.000	ENSMMOG00000012154	elavl3	99	100.000	Mola_mola
ENSACLG00000018260	elavl3	100	87.187	ENSMODG00000006653	ELAVL3	93	87.187	Monodelphis_domestica
ENSACLG00000018260	elavl3	99	96.338	ENSMALG00000016659	elavl3	99	96.338	Monopterus_albus
ENSACLG00000018260	elavl3	98	86.080	MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	Mus_caroli
ENSACLG00000018260	elavl3	99	83.747	ENSMUSG00000003410	Elavl3	99	84.848	Mus_musculus
ENSACLG00000018260	elavl3	98	85.795	MGP_PahariEiJ_G0014760	Elavl3	100	86.932	Mus_pahari
ENSACLG00000018260	elavl3	52	80.702	MGP_SPRETEiJ_G0033017	-	50	80.702	Mus_spretus
ENSACLG00000018260	elavl3	99	84.022	ENSMPUG00000005040	ELAVL3	99	85.124	Mustela_putorius_furo
ENSACLG00000018260	elavl3	100	85.014	ENSMLUG00000016320	ELAVL3	99	85.014	Myotis_lucifugus
ENSACLG00000018260	elavl3	100	83.880	ENSNGAG00000000968	Elavl3	100	84.973	Nannospalax_galili
ENSACLG00000018260	elavl3	100	96.100	ENSNBRG00000010319	elavl3	100	96.100	Neolamprologus_brichardi
ENSACLG00000018260	elavl3	99	88.154	ENSMEUG00000016706	ELAVL3	99	88.154	Notamacropus_eugenii
ENSACLG00000018260	elavl3	85	89.362	ENSOPRG00000007373	ELAVL3	95	89.362	Ochotona_princeps
ENSACLG00000018260	elavl3	99	84.298	ENSODEG00000015790	ELAVL3	100	84.932	Octodon_degus
ENSACLG00000018260	elavl3	99	96.338	ENSONIG00000001538	elavl3	98	96.338	Oreochromis_niloticus
ENSACLG00000018260	elavl3	83	86.905	ENSOANG00000015046	ELAVL3	98	86.905	Ornithorhynchus_anatinus
ENSACLG00000018260	elavl3	100	95.810	ENSORLG00000005379	elavl3	100	95.810	Oryzias_latipes
ENSACLG00000018260	elavl3	100	99.710	ENSORLG00020004570	elavl3	100	99.710	Oryzias_latipes_hni
ENSACLG00000018260	elavl3	100	94.972	ENSORLG00015000662	elavl3	100	94.972	Oryzias_latipes_hsok
ENSACLG00000018260	elavl3	100	99.420	ENSOMEG00000023959	elavl3	100	99.420	Oryzias_melastigma
ENSACLG00000018260	elavl3	99	84.298	ENSOGAG00000007072	ELAVL3	99	85.399	Otolemur_garnettii
ENSACLG00000018260	elavl3	99	84.573	ENSOARG00000018464	ELAVL3	99	85.675	Ovis_aries
ENSACLG00000018260	elavl3	99	84.298	ENSPPAG00000033972	ELAVL3	99	85.399	Pan_paniscus
ENSACLG00000018260	elavl3	99	84.298	ENSPPRG00000005151	ELAVL3	99	85.399	Panthera_pardus
ENSACLG00000018260	elavl3	97	84.071	ENSPTIG00000013610	ELAVL3	97	85.251	Panthera_tigris_altaica
ENSACLG00000018260	elavl3	99	84.298	ENSPTRG00000010506	ELAVL3	99	85.399	Pan_troglodytes
ENSACLG00000018260	elavl3	99	85.714	ENSPANG00000005849	ELAVL3	99	86.835	Papio_anubis
ENSACLG00000018260	elavl3	100	98.841	ENSPKIG00000016207	elavl3	100	98.841	Paramormyrops_kingsleyae
ENSACLG00000018260	elavl3	100	99.710	ENSPMGG00000002016	elavl3	100	99.710	Periophthalmus_magnuspinnatus
ENSACLG00000018260	elavl3	98	91.599	ENSPFOG00000007754	elavl3	100	91.599	Poecilia_formosa
ENSACLG00000018260	elavl3	98	100.000	ENSPLAG00000001547	elavl3	99	100.000	Poecilia_latipinna
ENSACLG00000018260	elavl3	98	100.000	ENSPMEG00000010156	elavl3	99	100.000	Poecilia_mexicana
ENSACLG00000018260	elavl3	100	99.420	ENSPREG00000006971	elavl3	100	99.420	Poecilia_reticulata
ENSACLG00000018260	elavl3	84	80.224	ENSPPYG00000009583	-	98	81.343	Pongo_abelii
ENSACLG00000018260	elavl3	82	88.182	ENSPCAG00000015952	ELAVL3	59	90.909	Procavia_capensis
ENSACLG00000018260	elavl3	100	83.967	ENSPCOG00000023781	ELAVL3	100	85.054	Propithecus_coquereli
ENSACLG00000018260	elavl3	99	84.298	ENSPVAG00000014893	ELAVL3	99	85.399	Pteropus_vampyrus
ENSACLG00000018260	elavl3	100	100.000	ENSPNYG00000013186	elavl3	98	100.000	Pundamilia_nyererei
ENSACLG00000018260	elavl3	100	99.420	ENSPNAG00000003633	elavl3	100	99.420	Pygocentrus_nattereri
ENSACLG00000018260	elavl3	99	83.747	ENSRNOG00000013752	Elavl3	99	84.848	Rattus_norvegicus
ENSACLG00000018260	elavl3	98	86.402	ENSRBIG00000034762	ELAVL3	99	87.535	Rhinopithecus_bieti
ENSACLG00000018260	elavl3	89	86.000	ENSRROG00000034305	ELAVL3	95	90.909	Rhinopithecus_roxellana
ENSACLG00000018260	elavl3	99	84.298	ENSSBOG00000030047	ELAVL3	100	89.103	Saimiri_boliviensis_boliviensis
ENSACLG00000018260	elavl3	96	93.478	ENSSHAG00000005583	ELAVL3	100	93.478	Sarcophilus_harrisii
ENSACLG00000018260	elavl3	98	94.970	ENSSFOG00015023630	elavl3	100	98.769	Scleropages_formosus
ENSACLG00000018260	elavl3	99	99.123	ENSSMAG00000004671	elavl3	99	99.123	Scophthalmus_maximus
ENSACLG00000018260	elavl3	99	100.000	ENSSDUG00000020708	elavl3	99	100.000	Seriola_dumerili
ENSACLG00000018260	elavl3	99	100.000	ENSSLDG00000013769	elavl3	99	100.000	Seriola_lalandi_dorsalis
ENSACLG00000018260	elavl3	99	74.451	ENSSARG00000005949	ELAVL3	99	75.549	Sorex_araneus
ENSACLG00000018260	elavl3	99	99.419	ENSSPAG00000000990	elavl3	100	99.419	Stegastes_partitus
ENSACLG00000018260	elavl3	99	84.298	ENSSSCG00000013617	ELAVL3	99	85.399	Sus_scrofa
ENSACLG00000018260	elavl3	98	100.000	ENSTRUG00000010719	elavl3	99	100.000	Takifugu_rubripes
ENSACLG00000018260	elavl3	99	95.531	ENSTNIG00000018572	elavl3	99	95.531	Tetraodon_nigroviridis
ENSACLG00000018260	elavl3	97	81.595	ENSTBEG00000006133	ELAVL3	99	82.822	Tupaia_belangeri
ENSACLG00000018260	elavl3	99	84.022	ENSTTRG00000001789	ELAVL3	99	85.124	Tursiops_truncatus
ENSACLG00000018260	elavl3	97	90.149	ENSUAMG00000000405	ELAVL3	96	91.343	Ursus_americanus
ENSACLG00000018260	elavl3	98	82.392	ENSUMAG00000019546	ELAVL3	88	83.721	Ursus_maritimus
ENSACLG00000018260	elavl3	99	85.955	ENSVVUG00000023733	ELAVL3	99	87.079	Vulpes_vulpes
ENSACLG00000018260	elavl3	100	91.643	ENSXETG00000016741	elavl3	100	91.643	Xenopus_tropicalis
ENSACLG00000018260	elavl3	100	99.420	ENSXMAG00000018287	elavl3	100	99.420	Xiphophorus_maculatus