EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000018279 (Gene tree)
Gene ID: 113007469
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 42191 bases
Position: chr16:7515902-7558092
Accession: 113007469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000026869	TUDOR	PF00567.24	5e-82	1	5
ENSACLP00000026869	TUDOR	PF00567.24	5e-82	2	5
ENSACLP00000026869	TUDOR	PF00567.24	5e-82	3	5
ENSACLP00000026869	TUDOR	PF00567.24	5e-82	4	5
ENSACLP00000026869	TUDOR	PF00567.24	5e-82	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000027497	-	9009	-	ENSACLP00000026869	1593 (aa)	XP_025999844	UPI000E3FD2E1

Gene Model

Click here to download ENSACLG00000018279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000018279	rnf17	64	31.304	ENSACLG00000007717	-	51	30.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018279	rnf17	98	30.834	ENSG00000132972	RNF17	99	35.182	Homo_sapiens
ENSACLG00000018279	rnf17	90	66.735	ENSAPOG00000017034	rnf17	97	66.735	Acanthochromis_polyacanthus
ENSACLG00000018279	rnf17	98	30.993	ENSAMEG00000017340	RNF17	97	31.212	Ailuropoda_melanoleuca
ENSACLG00000018279	rnf17	100	72.073	ENSAOCG00000018283	rnf17	100	72.073	Amphiprion_ocellaris
ENSACLG00000018279	rnf17	89	66.327	ENSAPEG00000022338	rnf17	96	66.327	Amphiprion_percula
ENSACLG00000018279	rnf17	90	65.977	ENSATEG00000002067	rnf17	99	65.977	Anabas_testudineus
ENSACLG00000018279	rnf17	88	30.764	ENSAPLG00000003969	RNF17	99	30.900	Anas_platyrhynchos
ENSACLG00000018279	rnf17	92	31.683	ENSACAG00000001418	RNF17	93	31.683	Anolis_carolinensis
ENSACLG00000018279	rnf17	92	47.679	ENSAMXG00000011002	rnf17	99	47.855	Astyanax_mexicanus
ENSACLG00000018279	rnf17	74	34.244	ENSCJAG00000018937	RNF17	99	35.693	Callithrix_jacchus
ENSACLG00000018279	rnf17	96	31.510	ENSCAFG00000007418	RNF17	97	31.664	Canis_familiaris
ENSACLG00000018279	rnf17	75	34.560	ENSCHIG00000026716	RNF17	99	36.041	Capra_hircus
ENSACLG00000018279	rnf17	98	30.965	ENSTSYG00000000365	RNF17	99	35.294	Carlito_syrichta
ENSACLG00000018279	rnf17	87	34.441	ENSCCAG00000026725	RNF17	99	34.453	Cebus_capucinus
ENSACLG00000018279	rnf17	98	30.579	ENSCATG00000040352	RNF17	99	34.891	Cercocebus_atys
ENSACLG00000018279	rnf17	98	31.634	ENSCLAG00000004127	RNF17	97	31.246	Chinchilla_lanigera
ENSACLG00000018279	rnf17	98	30.718	ENSCSAG00000018019	RNF17	97	30.718	Chlorocebus_sabaeus
ENSACLG00000018279	rnf17	52	45.926	ENSCHOG00000013310	RNF17	55	45.926	Choloepus_hoffmanni
ENSACLG00000018279	rnf17	94	31.919	ENSCPBG00000020920	RNF17	98	31.931	Chrysemys_picta_bellii
ENSACLG00000018279	rnf17	98	31.141	ENSCANG00000032927	RNF17	99	35.036	Colobus_angolensis_palliatus
ENSACLG00000018279	rnf17	88	34.800	ENSCGRG00001022658	Rnf17	91	34.434	Cricetulus_griseus_chok1gshd
ENSACLG00000018279	rnf17	88	34.800	ENSCGRG00000009924	Rnf17	91	34.434	Cricetulus_griseus_crigri
ENSACLG00000018279	rnf17	95	55.621	ENSCSEG00000008626	rnf17	99	55.369	Cynoglossus_semilaevis
ENSACLG00000018279	rnf17	76	58.840	ENSCVAG00000017008	rnf17	94	58.748	Cyprinodon_variegatus
ENSACLG00000018279	rnf17	99	43.413	ENSDARG00000056387	rnf17	99	43.484	Danio_rerio
ENSACLG00000018279	rnf17	98	30.783	ENSDNOG00000006115	RNF17	97	30.661	Dasypus_novemcinctus
ENSACLG00000018279	rnf17	55	34.691	ENSEASG00005001421	-	99	34.691	Equus_asinus_asinus
ENSACLG00000018279	rnf17	98	31.643	ENSECAG00000017152	RNF17	96	31.854	Equus_caballus
ENSACLG00000018279	rnf17	99	48.592	ENSELUG00000005626	rnf17	99	48.422	Esox_lucius
ENSACLG00000018279	rnf17	89	35.251	ENSFCAG00000004914	RNF17	99	35.493	Felis_catus
ENSACLG00000018279	rnf17	74	33.116	ENSFALG00000008766	RNF17	79	33.224	Ficedula_albicollis
ENSACLG00000018279	rnf17	88	33.333	ENSFDAG00000017857	RNF17	90	33.281	Fukomys_damarensis
ENSACLG00000018279	rnf17	100	62.304	ENSFHEG00000014822	rnf17	99	62.367	Fundulus_heteroclitus
ENSACLG00000018279	rnf17	58	48.362	ENSGMOG00000015560	-	100	48.362	Gadus_morhua
ENSACLG00000018279	rnf17	81	73.684	ENSGAFG00000004463	rnf17	96	73.684	Gambusia_affinis
ENSACLG00000018279	rnf17	93	30.619	ENSGAGG00000016999	RNF17	91	30.239	Gopherus_agassizii
ENSACLG00000018279	rnf17	98	30.894	ENSGGOG00000014491	RNF17	99	35.036	Gorilla_gorilla
ENSACLG00000018279	rnf17	100	98.745	ENSHBUG00000003554	rnf17	100	98.745	Haplochromis_burtoni
ENSACLG00000018279	rnf17	87	34.631	ENSHGLG00000007270	RNF17	97	30.625	Heterocephalus_glaber_female
ENSACLG00000018279	rnf17	87	34.550	ENSHGLG00100017393	RNF17	97	31.001	Heterocephalus_glaber_male
ENSACLG00000018279	rnf17	81	64.865	ENSHCOG00000017676	rnf17	96	64.865	Hippocampus_comes
ENSACLG00000018279	rnf17	86	49.662	ENSIPUG00000001087	rnf17	92	49.662	Ictalurus_punctatus
ENSACLG00000018279	rnf17	50	33.234	ENSSTOG00000011255	-	98	33.830	Ictidomys_tridecemlineatus
ENSACLG00000018279	rnf17	98	31.915	ENSJJAG00000016584	Rnf17	76	34.633	Jaculus_jaculus
ENSACLG00000018279	rnf17	100	67.413	ENSKMAG00000013403	rnf17	99	67.600	Kryptolebias_marmoratus
ENSACLG00000018279	rnf17	90	61.009	ENSLBEG00000014910	rnf17	96	61.009	Labrus_bergylta
ENSACLG00000018279	rnf17	56	35.032	ENSLACG00000000323	RNF17	81	34.926	Latimeria_chalumnae
ENSACLG00000018279	rnf17	99	37.162	ENSLOCG00000010768	rnf17	99	36.887	Lepisosteus_oculatus
ENSACLG00000018279	rnf17	98	30.941	ENSMFAG00000032388	RNF17	99	35.036	Macaca_fascicularis
ENSACLG00000018279	rnf17	98	31.005	ENSMMUG00000014610	RNF17	99	35.036	Macaca_mulatta
ENSACLG00000018279	rnf17	98	30.941	ENSMNEG00000011234	RNF17	99	35.036	Macaca_nemestrina
ENSACLG00000018279	rnf17	98	30.797	ENSMLEG00000030227	RNF17	97	30.797	Mandrillus_leucophaeus
ENSACLG00000018279	rnf17	87	65.432	ENSMAMG00000020403	rnf17	98	65.432	Mastacembelus_armatus
ENSACLG00000018279	rnf17	100	99.749	ENSMZEG00005019166	rnf17	100	99.749	Maylandia_zebra
ENSACLG00000018279	rnf17	77	31.313	ENSMGAG00000015138	RNF17	99	31.182	Meleagris_gallopavo
ENSACLG00000018279	rnf17	88	34.251	ENSMAUG00000004788	Rnf17	90	33.776	Mesocricetus_auratus
ENSACLG00000018279	rnf17	98	30.637	ENSMICG00000010364	RNF17	99	34.388	Microcebus_murinus
ENSACLG00000018279	rnf17	60	34.778	ENSMOCG00000011818	-	99	34.850	Microtus_ochrogaster
ENSACLG00000018279	rnf17	86	61.031	ENSMMOG00000019514	rnf17	98	61.031	Mola_mola
ENSACLG00000018279	rnf17	98	32.049	ENSMODG00000007827	RNF17	96	32.066	Monodelphis_domestica
ENSACLG00000018279	rnf17	89	60.539	ENSMALG00000016943	rnf17	99	59.945	Monopterus_albus
ENSACLG00000018279	rnf17	90	34.469	MGP_CAROLIEiJ_G0019337	Rnf17	99	30.695	Mus_caroli
ENSACLG00000018279	rnf17	90	34.550	ENSMUSG00000000365	Rnf17	99	30.811	Mus_musculus
ENSACLG00000018279	rnf17	88	34.474	MGP_PahariEiJ_G0030355	Rnf17	90	34.068	Mus_pahari
ENSACLG00000018279	rnf17	90	35.036	MGP_SPRETEiJ_G0020228	Rnf17	91	34.377	Mus_spretus
ENSACLG00000018279	rnf17	98	31.483	ENSMPUG00000013305	RNF17	97	31.349	Mustela_putorius_furo
ENSACLG00000018279	rnf17	98	30.821	ENSMLUG00000003903	RNF17	97	31.148	Myotis_lucifugus
ENSACLG00000018279	rnf17	98	31.993	ENSNGAG00000013553	Rnf17	97	31.951	Nannospalax_galili
ENSACLG00000018279	rnf17	80	82.187	ENSNBRG00000012006	rnf17	96	82.187	Neolamprologus_brichardi
ENSACLG00000018279	rnf17	98	30.611	ENSNLEG00000013780	RNF17	99	34.751	Nomascus_leucogenys
ENSACLG00000018279	rnf17	80	36.986	ENSOPRG00000016743	-	66	32.000	Ochotona_princeps
ENSACLG00000018279	rnf17	100	95.355	ENSONIG00000015746	rnf17	100	95.355	Oreochromis_niloticus
ENSACLG00000018279	rnf17	98	30.793	ENSOCUG00000007384	RNF17	97	30.840	Oryctolagus_cuniculus
ENSACLG00000018279	rnf17	89	56.430	ENSORLG00000012818	rnf17	99	56.219	Oryzias_latipes
ENSACLG00000018279	rnf17	100	56.020	ENSORLG00020009879	-	100	55.978	Oryzias_latipes_hni
ENSACLG00000018279	rnf17	99	55.993	ENSORLG00015013027	-	99	55.826	Oryzias_latipes_hsok
ENSACLG00000018279	rnf17	76	61.345	ENSOMEG00000009891	rnf17	97	60.976	Oryzias_melastigma
ENSACLG00000018279	rnf17	98	30.469	ENSOGAG00000014803	RNF17	97	30.965	Otolemur_garnettii
ENSACLG00000018279	rnf17	98	31.662	ENSOARG00000014641	RNF17	99	31.843	Ovis_aries
ENSACLG00000018279	rnf17	77	33.488	ENSPPAG00000028779	RNF17	99	35.044	Pan_paniscus
ENSACLG00000018279	rnf17	89	35.413	ENSPPRG00000009230	RNF17	99	35.346	Panthera_pardus
ENSACLG00000018279	rnf17	89	35.413	ENSPTIG00000001738	RNF17	99	35.346	Panthera_tigris_altaica
ENSACLG00000018279	rnf17	98	30.755	ENSPTRG00000005713	RNF17	99	35.044	Pan_troglodytes
ENSACLG00000018279	rnf17	98	30.737	ENSPANG00000007640	RNF17	99	34.891	Papio_anubis
ENSACLG00000018279	rnf17	79	43.648	ENSPKIG00000001648	rnf17	93	44.328	Paramormyrops_kingsleyae
ENSACLG00000018279	rnf17	74	36.091	ENSPSIG00000011245	RNF17	99	36.633	Pelodiscus_sinensis
ENSACLG00000018279	rnf17	90	34.684	ENSPEMG00000008693	Rnf17	91	34.194	Peromyscus_maniculatus_bairdii
ENSACLG00000018279	rnf17	69	33.516	ENSPCIG00000009190	-	91	33.705	Phascolarctos_cinereus
ENSACLG00000018279	rnf17	100	64.091	ENSPFOG00000007124	rnf17	100	64.295	Poecilia_formosa
ENSACLG00000018279	rnf17	100	65.543	ENSPLAG00000006198	rnf17	99	65.688	Poecilia_latipinna
ENSACLG00000018279	rnf17	100	65.543	ENSPMEG00000022432	rnf17	99	65.688	Poecilia_mexicana
ENSACLG00000018279	rnf17	81	69.841	ENSPREG00000001414	rnf17	92	69.841	Poecilia_reticulata
ENSACLG00000018279	rnf17	98	30.576	ENSPPYG00000005215	RNF17	88	33.816	Pongo_abelii
ENSACLG00000018279	rnf17	61	38.072	ENSPCAG00000002665	RNF17	65	38.072	Procavia_capensis
ENSACLG00000018279	rnf17	71	47.794	ENSPVAG00000013021	RNF17	73	47.794	Pteropus_vampyrus
ENSACLG00000018279	rnf17	86	56.689	ENSPNAG00000027505	rnf17	99	51.561	Pygocentrus_nattereri
ENSACLG00000018279	rnf17	98	30.988	ENSRNOG00000008059	Rnf17	97	30.896	Rattus_norvegicus
ENSACLG00000018279	rnf17	98	30.242	ENSRBIG00000027010	RNF17	97	30.774	Rhinopithecus_bieti
ENSACLG00000018279	rnf17	98	30.974	ENSRROG00000022801	RNF17	99	35.234	Rhinopithecus_roxellana
ENSACLG00000018279	rnf17	87	34.488	ENSSBOG00000021661	RNF17	99	35.819	Saimiri_boliviensis_boliviensis
ENSACLG00000018279	rnf17	98	31.733	ENSSHAG00000005609	RNF17	97	31.765	Sarcophilus_harrisii
ENSACLG00000018279	rnf17	74	43.570	ENSSFOG00015023037	rnf17	89	43.570	Scleropages_formosus
ENSACLG00000018279	rnf17	91	61.081	ENSSMAG00000007429	rnf17	98	60.987	Scophthalmus_maximus
ENSACLG00000018279	rnf17	90	68.104	ENSSDUG00000013530	rnf17	100	68.104	Seriola_dumerili
ENSACLG00000018279	rnf17	91	69.444	ENSSLDG00000019577	rnf17	99	69.444	Seriola_lalandi_dorsalis
ENSACLG00000018279	rnf17	70	34.234	ENSSARG00000003016	RNF17	63	34.234	Sorex_araneus
ENSACLG00000018279	rnf17	90	31.096	ENSSPUG00000008917	RNF17	96	31.164	Sphenodon_punctatus
ENSACLG00000018279	rnf17	89	66.573	ENSSPAG00000001925	rnf17	99	66.643	Stegastes_partitus
ENSACLG00000018279	rnf17	99	30.332	ENSSSCG00000009572	RNF17	98	30.842	Sus_scrofa
ENSACLG00000018279	rnf17	58	32.956	ENSTGUG00000011267	-	100	32.956	Taeniopygia_guttata
ENSACLG00000018279	rnf17	99	51.434	ENSTRUG00000015498	rnf17	99	51.434	Takifugu_rubripes
ENSACLG00000018279	rnf17	74	54.401	ENSTNIG00000015681	rnf17	99	54.401	Tetraodon_nigroviridis
ENSACLG00000018279	rnf17	77	40.417	ENSTBEG00000000282	RNF17	74	40.417	Tupaia_belangeri
ENSACLG00000018279	rnf17	50	41.627	ENSUMAG00000013953	-	99	34.853	Ursus_maritimus
ENSACLG00000018279	rnf17	84	45.070	ENSVPAG00000011388	RNF17	78	45.070	Vicugna_pacos
ENSACLG00000018279	rnf17	98	31.598	ENSVVUG00000006226	RNF17	97	31.598	Vulpes_vulpes
ENSACLG00000018279	rnf17	70	31.676	ENSXETG00000034020	RNF17	99	40.000	Xenopus_tropicalis
ENSACLG00000018279	rnf17	90	60.095	ENSXCOG00000018295	rnf17	99	61.100	Xiphophorus_couchianus
ENSACLG00000018279	rnf17	90	61.918	ENSXMAG00000014747	rnf17	99	62.397	Xiphophorus_maculatus