EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000018296 (Gene tree)
Gene ID: 113013452
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 89471 bases
Position: chr20:22619369-22708839
Accession: 113013452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000026947	ResIII	PF04851.15	4.6e-07	1	1
ENSACLP00000026884	ResIII	PF04851.15	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000027578	-	8284	-	ENSACLP00000026947	1480 (aa)	XP_026010141	UPI000E42931D
ENSACLT00000027515	-	8438	-	ENSACLP00000026884	1505 (aa)	XP_026010139	UPI000E41900F

Gene Model

Click here to download ENSACLG00000018296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000018296	-	97	60.146	ENSACLG00000019111	rad54l2	96	60.132

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018296	-	91	59.957	ENSG00000164080	RAD54L2	95	60.692	Homo_sapiens
ENSACLG00000018296	-	100	85.925	ENSAPOG00000024141	-	100	85.255	Acanthochromis_polyacanthus
ENSACLG00000018296	-	91	59.644	ENSAMEG00000009326	RAD54L2	93	58.525	Ailuropoda_melanoleuca
ENSACLG00000018296	-	85	64.985	ENSACIG00000018079	rad54l2	92	62.979	Amphilophus_citrinellus
ENSACLG00000018296	-	94	87.176	ENSACIG00000015932	-	100	86.599	Amphilophus_citrinellus
ENSACLG00000018296	-	100	85.647	ENSAOCG00000022380	-	100	85.044	Amphiprion_ocellaris
ENSACLG00000018296	-	97	61.873	ENSATEG00000009346	rad54l2	96	60.588	Anabas_testudineus
ENSACLG00000018296	-	100	85.676	ENSATEG00000006641	-	100	85.475	Anabas_testudineus
ENSACLG00000018296	-	95	61.464	ENSAPLG00000002121	RAD54L2	94	62.321	Anas_platyrhynchos
ENSACLG00000018296	-	81	67.208	ENSACAG00000015883	RAD54L2	96	64.612	Anolis_carolinensis
ENSACLG00000018296	-	91	59.814	ENSANAG00000025396	RAD54L2	96	57.598	Aotus_nancymaae
ENSACLG00000018296	-	94	61.851	ENSAMXG00000013807	rad54l2	97	60.147	Astyanax_mexicanus
ENSACLG00000018296	-	91	59.515	ENSBTAG00000032253	RAD54L2	91	60.452	Bos_taurus
ENSACLG00000018296	-	91	59.814	ENSCJAG00000005575	RAD54L2	92	61.673	Callithrix_jacchus
ENSACLG00000018296	-	91	59.743	ENSCAFG00000010120	RAD54L2	90	59.797	Canis_familiaris
ENSACLG00000018296	-	91	59.743	ENSCAFG00020022320	RAD54L2	90	59.797	Canis_lupus_dingo
ENSACLG00000018296	-	91	59.728	ENSCHIG00000008830	RAD54L2	97	57.133	Capra_hircus
ENSACLG00000018296	-	91	59.543	ENSTSYG00000013200	RAD54L2	96	57.211	Carlito_syrichta
ENSACLG00000018296	-	78	67.579	ENSCAPG00000016465	RAD54L2	84	67.965	Cavia_aperea
ENSACLG00000018296	-	91	59.814	ENSCPOG00000005941	RAD54L2	97	57.286	Cavia_porcellus
ENSACLG00000018296	-	79	60.049	ENSCCAG00000024465	RAD54L2	90	59.357	Cebus_capucinus
ENSACLG00000018296	-	91	59.743	ENSCATG00000039891	RAD54L2	96	57.520	Cercocebus_atys
ENSACLG00000018296	-	91	59.458	ENSCLAG00000008059	RAD54L2	97	56.836	Chinchilla_lanigera
ENSACLG00000018296	-	91	59.814	ENSCSAG00000014027	RAD54L2	96	57.531	Chlorocebus_sabaeus
ENSACLG00000018296	-	97	61.399	ENSCPBG00000016624	RAD54L2	98	60.296	Chrysemys_picta_bellii
ENSACLG00000018296	-	69	50.285	ENSCING00000009208	-	87	52.328	Ciona_intestinalis
ENSACLG00000018296	-	91	59.729	ENSCANG00000036093	RAD54L2	96	57.588	Colobus_angolensis_palliatus
ENSACLG00000018296	-	91	59.558	ENSCGRG00000007921	Rad54l2	94	57.779	Cricetulus_griseus_crigri
ENSACLG00000018296	-	87	79.559	ENSCSEG00000006115	-	100	79.179	Cynoglossus_semilaevis
ENSACLG00000018296	-	96	57.793	ENSCSEG00000001740	rad54l2	97	57.248	Cynoglossus_semilaevis
ENSACLG00000018296	-	94	61.635	ENSCVAG00000017887	rad54l2	96	59.324	Cyprinodon_variegatus
ENSACLG00000018296	-	100	77.488	ENSCVAG00000005376	-	96	78.294	Cyprinodon_variegatus
ENSACLG00000018296	-	95	62.526	ENSDARG00000063031	rad54l2	95	63.565	Danio_rerio
ENSACLG00000018296	-	94	58.640	ENSDNOG00000017359	RAD54L2	96	58.188	Dasypus_novemcinctus
ENSACLG00000018296	-	84	69.877	ENSDORG00000000651	Rad54l2	94	64.821	Dipodomys_ordii
ENSACLG00000018296	-	91	58.586	ENSETEG00000013290	RAD54L2	98	58.011	Echinops_telfairi
ENSACLG00000018296	-	70	57.457	ENSEBUG00000001591	rad54l2	74	60.594	Eptatretus_burgeri
ENSACLG00000018296	-	91	59.957	ENSEASG00005012868	RAD54L2	96	57.770	Equus_asinus_asinus
ENSACLG00000018296	-	91	59.886	ENSECAG00000014759	RAD54L2	91	59.570	Equus_caballus
ENSACLG00000018296	-	79	68.620	ENSEEUG00000001759	RAD54L2	83	68.431	Erinaceus_europaeus
ENSACLG00000018296	-	98	70.069	ENSELUG00000011246	RAD54L2	97	70.090	Esox_lucius
ENSACLG00000018296	-	91	59.786	ENSFCAG00000018563	RAD54L2	91	59.427	Felis_catus
ENSACLG00000018296	-	80	67.528	ENSFALG00000008938	RAD54L2	96	65.111	Ficedula_albicollis
ENSACLG00000018296	-	91	59.743	ENSFDAG00000017084	RAD54L2	97	57.219	Fukomys_damarensis
ENSACLG00000018296	-	100	79.320	ENSFHEG00000017845	-	99	78.919	Fundulus_heteroclitus
ENSACLG00000018296	-	94	61.394	ENSFHEG00000023241	rad54l2	96	59.067	Fundulus_heteroclitus
ENSACLG00000018296	-	82	67.590	ENSGMOG00000010674	rad54l2	92	66.083	Gadus_morhua
ENSACLG00000018296	-	95	61.288	ENSGALG00000003243	RAD54L2	96	59.667	Gallus_gallus
ENSACLG00000018296	-	99	78.668	ENSGAFG00000002396	-	99	78.644	Gambusia_affinis
ENSACLG00000018296	-	94	62.149	ENSGAFG00000021535	rad54l2	99	58.285	Gambusia_affinis
ENSACLG00000018296	-	94	60.462	ENSGACG00000001558	rad54l2	97	60.157	Gasterosteus_aculeatus
ENSACLG00000018296	-	87	80.403	ENSGACG00000005642	-	100	79.783	Gasterosteus_aculeatus
ENSACLG00000018296	-	92	62.580	ENSGAGG00000020971	RAD54L2	81	71.827	Gopherus_agassizii
ENSACLG00000018296	-	91	59.957	ENSGGOG00000010032	RAD54L2	96	57.734	Gorilla_gorilla
ENSACLG00000018296	-	97	60.385	ENSHBUG00000012480	rad54l2	96	60.303	Haplochromis_burtoni
ENSACLG00000018296	-	100	99.402	ENSHBUG00000018930	-	100	99.402	Haplochromis_burtoni
ENSACLG00000018296	-	91	59.886	ENSHGLG00000012116	RAD54L2	97	57.353	Heterocephalus_glaber_female
ENSACLG00000018296	-	91	59.886	ENSHGLG00100007205	RAD54L2	97	57.353	Heterocephalus_glaber_male
ENSACLG00000018296	-	97	58.300	ENSHCOG00000007601	rad54l2	95	58.411	Hippocampus_comes
ENSACLG00000018296	-	99	74.398	ENSHCOG00000006741	-	97	74.115	Hippocampus_comes
ENSACLG00000018296	-	89	61.440	ENSIPUG00000019664	rad54l2	95	58.305	Ictalurus_punctatus
ENSACLG00000018296	-	92	59.884	ENSIPUG00000024973	-	96	59.364	Ictalurus_punctatus
ENSACLG00000018296	-	94	58.594	ENSSTOG00000010014	RAD54L2	96	57.278	Ictidomys_tridecemlineatus
ENSACLG00000018296	-	91	59.743	ENSJJAG00000014332	Rad54l2	96	57.520	Jaculus_jaculus
ENSACLG00000018296	-	99	59.817	ENSKMAG00000001976	rad54l2	97	59.484	Kryptolebias_marmoratus
ENSACLG00000018296	-	99	81.707	ENSKMAG00000002931	-	98	81.356	Kryptolebias_marmoratus
ENSACLG00000018296	-	94	61.738	ENSLBEG00000018779	rad54l2	95	60.147	Labrus_bergylta
ENSACLG00000018296	-	87	82.582	ENSLBEG00000008534	-	100	81.804	Labrus_bergylta
ENSACLG00000018296	-	91	58.092	ENSLACG00000016004	RAD54L2	97	56.104	Latimeria_chalumnae
ENSACLG00000018296	-	71	73.346	ENSLOCG00000014222	rad54l2	99	72.812	Lepisosteus_oculatus
ENSACLG00000018296	-	91	59.828	ENSLAFG00000005966	RAD54L2	95	57.996	Loxodonta_africana
ENSACLG00000018296	-	91	59.814	ENSMFAG00000041836	RAD54L2	96	57.588	Macaca_fascicularis
ENSACLG00000018296	-	91	59.814	ENSMMUG00000012002	RAD54L2	96	57.588	Macaca_mulatta
ENSACLG00000018296	-	91	59.814	ENSMNEG00000035063	RAD54L2	96	57.588	Macaca_nemestrina
ENSACLG00000018296	-	91	59.814	ENSMLEG00000034668	RAD54L2	96	57.588	Mandrillus_leucophaeus
ENSACLG00000018296	-	100	82.609	ENSMAMG00000015321	-	100	82.475	Mastacembelus_armatus
ENSACLG00000018296	-	92	70.191	ENSMAMG00000023761	rad54l2	95	68.430	Mastacembelus_armatus
ENSACLG00000018296	-	100	99.797	ENSMZEG00005021308	-	100	99.797	Maylandia_zebra
ENSACLG00000018296	-	97	60.319	ENSMZEG00005012584	rad54l2	97	59.840	Maylandia_zebra
ENSACLG00000018296	-	95	62.050	ENSMGAG00000002911	RAD54L2	91	62.473	Meleagris_gallopavo
ENSACLG00000018296	-	71	68.045	ENSMAUG00000011651	Rad54l2	97	67.148	Mesocricetus_auratus
ENSACLG00000018296	-	98	56.582	ENSMICG00000002777	RAD54L2	95	57.848	Microcebus_murinus
ENSACLG00000018296	-	91	59.800	ENSMOCG00000022448	Rad54l2	93	59.382	Microtus_ochrogaster
ENSACLG00000018296	-	94	80.300	ENSMMOG00000016901	-	99	79.943	Mola_mola
ENSACLG00000018296	-	83	66.265	ENSMMOG00000021709	rad54l2	92	61.838	Mola_mola
ENSACLG00000018296	-	90	62.679	ENSMODG00000011850	RAD54L2	96	62.024	Monodelphis_domestica
ENSACLG00000018296	-	87	81.923	ENSMALG00000015084	-	97	85.842	Monopterus_albus
ENSACLG00000018296	-	95	57.848	MGP_CAROLIEiJ_G0032634	Rad54l2	96	57.453	Mus_caroli
ENSACLG00000018296	-	95	57.938	ENSMUSG00000040661	Rad54l2	97	56.990	Mus_musculus
ENSACLG00000018296	-	95	57.625	MGP_PahariEiJ_G0015502	Rad54l2	96	57.230	Mus_pahari
ENSACLG00000018296	-	95	57.781	MGP_SPRETEiJ_G0033779	Rad54l2	96	57.385	Mus_spretus
ENSACLG00000018296	-	94	58.738	ENSMPUG00000011865	RAD54L2	93	58.426	Mustela_putorius_furo
ENSACLG00000018296	-	91	60.186	ENSMLUG00000004605	RAD54L2	96	57.955	Myotis_lucifugus
ENSACLG00000018296	-	91	59.886	ENSNGAG00000015629	Rad54l2	96	57.500	Nannospalax_galili
ENSACLG00000018296	-	85	64.942	ENSNBRG00000001937	rad54l2	89	65.035	Neolamprologus_brichardi
ENSACLG00000018296	-	100	98.581	ENSNBRG00000022847	-	100	98.581	Neolamprologus_brichardi
ENSACLG00000018296	-	91	59.957	ENSNLEG00000007038	RAD54L2	96	57.666	Nomascus_leucogenys
ENSACLG00000018296	-	90	75.413	ENSMEUG00000009835	RAD54L2	92	74.495	Notamacropus_eugenii
ENSACLG00000018296	-	91	59.757	ENSODEG00000018266	RAD54L2	96	57.210	Octodon_degus
ENSACLG00000018296	-	100	93.108	ENSONIG00000001663	-	100	93.108	Oreochromis_niloticus
ENSACLG00000018296	-	97	61.314	ENSONIG00000014468	rad54l2	96	60.549	Oreochromis_niloticus
ENSACLG00000018296	-	95	61.046	ENSOANG00000012793	RAD54L2	94	62.081	Ornithorhynchus_anatinus
ENSACLG00000018296	-	91	59.814	ENSOCUG00000017577	RAD54L2	96	57.549	Oryctolagus_cuniculus
ENSACLG00000018296	-	96	60.478	ENSORLG00000002276	rad54l2	98	59.483	Oryzias_latipes
ENSACLG00000018296	-	99	77.011	ENSORLG00000002714	-	99	76.609	Oryzias_latipes
ENSACLG00000018296	-	99	77.145	ENSORLG00020019256	-	99	76.743	Oryzias_latipes_hni
ENSACLG00000018296	-	98	60.311	ENSORLG00020003470	rad54l2	97	59.682	Oryzias_latipes_hni
ENSACLG00000018296	-	98	60.243	ENSORLG00015021530	rad54l2	96	60.146	Oryzias_latipes_hsok
ENSACLG00000018296	-	99	77.145	ENSORLG00015013408	-	99	77.011	Oryzias_latipes_hsok
ENSACLG00000018296	-	96	59.623	ENSOMEG00000005597	rad54l2	97	57.818	Oryzias_melastigma
ENSACLG00000018296	-	99	76.403	ENSOMEG00000008216	-	99	76.040	Oryzias_melastigma
ENSACLG00000018296	-	76	60.699	ENSOGAG00000012442	RAD54L2	97	60.103	Otolemur_garnettii
ENSACLG00000018296	-	91	59.800	ENSOARG00000007264	RAD54L2	97	57.200	Ovis_aries
ENSACLG00000018296	-	91	59.957	ENSPPAG00000038472	RAD54L2	96	57.598	Pan_paniscus
ENSACLG00000018296	-	91	59.786	ENSPPRG00000010212	RAD54L2	91	59.427	Panthera_pardus
ENSACLG00000018296	-	91	59.857	ENSPTIG00000002240	RAD54L2	91	59.427	Panthera_tigris_altaica
ENSACLG00000018296	-	91	59.957	ENSPTRG00000014974	RAD54L2	96	57.598	Pan_troglodytes
ENSACLG00000018296	-	91	59.814	ENSPANG00000000857	RAD54L2	96	57.588	Papio_anubis
ENSACLG00000018296	-	100	65.298	ENSPKIG00000001065	rad54l2	97	66.736	Paramormyrops_kingsleyae
ENSACLG00000018296	-	67	72.434	ENSPSIG00000014346	RAD54L2	97	69.084	Pelodiscus_sinensis
ENSACLG00000018296	-	97	68.298	ENSPMGG00000000641	-	97	69.105	Periophthalmus_magnuspinnatus
ENSACLG00000018296	-	86	62.730	ENSPMGG00000002208	rad54l2	95	64.274	Periophthalmus_magnuspinnatus
ENSACLG00000018296	-	91	59.700	ENSPEMG00000012051	Rad54l2	91	59.382	Peromyscus_maniculatus_bairdii
ENSACLG00000018296	-	89	61.584	ENSPCIG00000018143	RAD54L2	95	62.357	Phascolarctos_cinereus
ENSACLG00000018296	-	100	79.183	ENSPFOG00000000197	-	100	78.969	Poecilia_formosa
ENSACLG00000018296	-	94	62.439	ENSPFOG00000018644	rad54l2	96	59.208	Poecilia_formosa
ENSACLG00000018296	-	94	62.149	ENSPLAG00000006015	rad54l2	95	59.210	Poecilia_latipinna
ENSACLG00000018296	-	100	79.197	ENSPLAG00000013908	-	100	79.050	Poecilia_latipinna
ENSACLG00000018296	-	100	79.451	ENSPMEG00000009878	-	100	78.902	Poecilia_mexicana
ENSACLG00000018296	-	94	62.509	ENSPMEG00000021535	rad54l2	96	59.538	Poecilia_mexicana
ENSACLG00000018296	-	94	61.848	ENSPREG00000008628	rad54l2	97	62.180	Poecilia_reticulata
ENSACLG00000018296	-	99	79.076	ENSPREG00000013377	RAD54L2	99	78.712	Poecilia_reticulata
ENSACLG00000018296	-	91	60.029	ENSPPYG00000013831	RAD54L2	94	59.555	Pongo_abelii
ENSACLG00000018296	-	74	61.868	ENSPCAG00000011952	RAD54L2	80	61.089	Procavia_capensis
ENSACLG00000018296	-	95	58.138	ENSPCOG00000015983	RAD54L2	95	57.787	Propithecus_coquereli
ENSACLG00000018296	-	85	64.715	ENSPNYG00000020693	rad54l2	88	65.490	Pundamilia_nyererei
ENSACLG00000018296	-	100	99.392	ENSPNYG00000011435	-	100	99.392	Pundamilia_nyererei
ENSACLG00000018296	-	94	62.088	ENSPNAG00000006451	rad54l2	97	60.959	Pygocentrus_nattereri
ENSACLG00000018296	-	100	63.256	ENSPNAG00000011583	-	97	64.345	Pygocentrus_nattereri
ENSACLG00000018296	-	95	55.074	ENSRNOG00000013570	Rad54l2	96	54.545	Rattus_norvegicus
ENSACLG00000018296	-	67	68.159	ENSRNOG00000049489	LOC102552166	97	65.193	Rattus_norvegicus
ENSACLG00000018296	-	91	59.729	ENSRBIG00000032434	RAD54L2	95	62.336	Rhinopithecus_bieti
ENSACLG00000018296	-	91	59.729	ENSRROG00000042309	RAD54L2	96	57.656	Rhinopithecus_roxellana
ENSACLG00000018296	-	91	59.814	ENSSBOG00000002139	RAD54L2	96	57.666	Saimiri_boliviensis_boliviensis
ENSACLG00000018296	-	95	60.908	ENSSHAG00000008604	RAD54L2	93	61.610	Sarcophilus_harrisii
ENSACLG00000018296	-	100	66.622	ENSSFOG00015019014	rad54l2	97	67.309	Scleropages_formosus
ENSACLG00000018296	-	94	60.307	ENSSMAG00000020933	rad54l2	96	57.428	Scophthalmus_maximus
ENSACLG00000018296	-	100	79.385	ENSSMAG00000009978	-	100	78.992	Scophthalmus_maximus
ENSACLG00000018296	-	99	60.144	ENSSDUG00000014268	rad54l2	96	59.828	Seriola_dumerili
ENSACLG00000018296	-	100	83.747	ENSSDUG00000016711	-	100	83.747	Seriola_dumerili
ENSACLG00000018296	-	96	82.135	ENSSLDG00000023388	-	100	81.564	Seriola_lalandi_dorsalis
ENSACLG00000018296	-	94	62.239	ENSSLDG00000023959	rad54l2	97	62.700	Seriola_lalandi_dorsalis
ENSACLG00000018296	-	97	61.107	ENSSPAG00000016532	rad54l2	97	60.285	Stegastes_partitus
ENSACLG00000018296	-	94	85.511	ENSSPAG00000006371	-	100	86.009	Stegastes_partitus
ENSACLG00000018296	-	95	58.196	ENSSSCG00000011425	RAD54L2	97	57.191	Sus_scrofa
ENSACLG00000018296	-	95	61.290	ENSTGUG00000004888	RAD54L2	96	60.121	Taeniopygia_guttata
ENSACLG00000018296	-	94	61.084	ENSTRUG00000013962	rad54l2	96	58.749	Takifugu_rubripes
ENSACLG00000018296	-	100	75.636	ENSTRUG00000011066	-	100	75.301	Takifugu_rubripes
ENSACLG00000018296	-	73	70.391	ENSTNIG00000014694	rad54l2	99	68.272	Tetraodon_nigroviridis
ENSACLG00000018296	-	74	79.295	ENSTNIG00000006049	-	99	79.345	Tetraodon_nigroviridis
ENSACLG00000018296	-	86	59.094	ENSTBEG00000003377	RAD54L2	92	70.401	Tupaia_belangeri
ENSACLG00000018296	-	94	58.287	ENSUAMG00000020891	RAD54L2	97	57.961	Ursus_americanus
ENSACLG00000018296	-	94	58.496	ENSUMAG00000021678	RAD54L2	93	58.182	Ursus_maritimus
ENSACLG00000018296	-	91	59.743	ENSVVUG00000026874	RAD54L2	93	59.797	Vulpes_vulpes
ENSACLG00000018296	-	95	59.917	ENSXETG00000000070	rad54l2	83	66.220	Xenopus_tropicalis
ENSACLG00000018296	-	96	74.983	ENSXCOG00000002848	-	99	75.035	Xiphophorus_couchianus
ENSACLG00000018296	-	94	58.322	ENSXCOG00000004961	rad54l2	89	60.199	Xiphophorus_couchianus
ENSACLG00000018296	-	100	79.035	ENSXMAG00000019370	-	100	79.357	Xiphophorus_maculatus
ENSACLG00000018296	-	94	61.630	ENSXMAG00000017182	rad54l2	91	70.037	Xiphophorus_maculatus