EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000018492 (Gene tree)
Gene ID: 113020538
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB-binding 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 29235 bases
Position: chr4:10509538-10538772
Accession: ZDB-GENE-050522-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000027316	RRM_1	PF00076.22	4.1e-29	1	2
ENSACLP00000027316	RRM_1	PF00076.22	4.1e-29	2	2
ENSACLP00000027212	RRM_1	PF00076.22	5.8e-29	1	2
ENSACLP00000027212	RRM_1	PF00076.22	5.8e-29	2	2
ENSACLP00000027251	RRM_1	PF00076.22	5.9e-29	1	2
ENSACLP00000027251	RRM_1	PF00076.22	5.9e-29	2	2
ENSACLP00000027195	RRM_1	PF00076.22	6.2e-29	1	2
ENSACLP00000027195	RRM_1	PF00076.22	6.2e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000027958	-	2103	-	ENSACLP00000027316	700 (aa)	-	-
ENSACLT00000027849	-	3136	-	ENSACLP00000027212	762 (aa)	-	-
ENSACLT00000027831	-	3678	-	ENSACLP00000027195	779 (aa)	-	-
ENSACLT00000027884	-	7403	-	ENSACLP00000027251	766 (aa)	-	-

Gene Model

Click here to download ENSACLG00000018492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018492's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018492	raver1	91	52.006	ENSG00000161847	RAVER1	96	51.099	Homo_sapiens
ENSACLG00000018492	raver1	94	87.344	ENSAPOG00000017267	raver1	92	87.141	Acanthochromis_polyacanthus
ENSACLG00000018492	raver1	75	85.417	ENSAMEG00000011738	RAVER1	70	85.417	Ailuropoda_melanoleuca
ENSACLG00000018492	raver1	94	88.579	ENSAOCG00000005128	raver1	97	88.356	Amphiprion_ocellaris
ENSACLG00000018492	raver1	94	88.504	ENSAPEG00000010854	raver1	100	88.283	Amphiprion_percula
ENSACLG00000018492	raver1	94	84.284	ENSATEG00000021004	raver1	100	83.973	Anabas_testudineus
ENSACLG00000018492	raver1	67	55.800	ENSACAG00000008386	-	74	55.945	Anolis_carolinensis
ENSACLG00000018492	raver1	75	85.417	ENSANAG00000028226	RAVER1	70	85.417	Aotus_nancymaae
ENSACLG00000018492	raver1	97	67.143	ENSAMXG00000005132	raver1	100	66.528	Astyanax_mexicanus
ENSACLG00000018492	raver1	76	80.769	ENSBTAG00000015721	RAVER1	91	60.494	Bos_taurus
ENSACLG00000018492	raver1	75	85.417	ENSCJAG00000005671	RAVER1	70	85.417	Callithrix_jacchus
ENSACLG00000018492	raver1	91	51.909	ENSCAFG00000017861	RAVER1	94	51.351	Canis_familiaris
ENSACLG00000018492	raver1	91	51.909	ENSCAFG00020024449	RAVER1	96	51.351	Canis_lupus_dingo
ENSACLG00000018492	raver1	91	50.629	ENSCHIG00000006718	RAVER1	73	61.905	Capra_hircus
ENSACLG00000018492	raver1	51	68.785	ENSTSYG00000027107	RAVER1	100	50.698	Carlito_syrichta
ENSACLG00000018492	raver1	76	85.417	ENSCAPG00000002269	RAVER1	74	85.417	Cavia_aperea
ENSACLG00000018492	raver1	75	85.417	ENSCPOG00000001008	RAVER1	73	85.417	Cavia_porcellus
ENSACLG00000018492	raver1	68	61.317	ENSCCAG00000031723	RAVER1	65	60.986	Cebus_capucinus
ENSACLG00000018492	raver1	68	60.905	ENSCATG00000043863	RAVER1	64	60.575	Cercocebus_atys
ENSACLG00000018492	raver1	63	60.575	ENSCSAG00000007317	RAVER1	55	60.575	Chlorocebus_sabaeus
ENSACLG00000018492	raver1	91	50.676	ENSCPBG00000005349	-	96	51.743	Chrysemys_picta_bellii
ENSACLG00000018492	raver1	68	57.526	ENSCANG00000008337	RAVER1	64	60.575	Colobus_angolensis_palliatus
ENSACLG00000018492	raver1	76	87.500	ENSCGRG00001013260	-	74	87.500	Cricetulus_griseus_chok1gshd
ENSACLG00000018492	raver1	76	87.500	ENSCGRG00000015138	-	74	87.500	Cricetulus_griseus_crigri
ENSACLG00000018492	raver1	94	76.406	ENSCSEG00000021092	raver1	100	76.113	Cynoglossus_semilaevis
ENSACLG00000018492	raver1	95	79.372	ENSCVAG00000013971	raver1	100	79.372	Cyprinodon_variegatus
ENSACLG00000018492	raver1	94	68.276	ENSDARG00000052617	raver1	100	65.986	Danio_rerio
ENSACLG00000018492	raver1	52	83.333	ENSDNOG00000035742	-	52	83.333	Dasypus_novemcinctus
ENSACLG00000018492	raver1	69	53.452	ENSDORG00000010106	-	97	46.925	Dipodomys_ordii
ENSACLG00000018492	raver1	51	38.847	ENSEBUG00000003030	RAVER1	53	38.384	Eptatretus_burgeri
ENSACLG00000018492	raver1	53	69.415	ENSEASG00005010544	-	68	68.966	Equus_asinus_asinus
ENSACLG00000018492	raver1	75	85.417	ENSECAG00000024966	RAVER1	70	85.417	Equus_caballus
ENSACLG00000018492	raver1	95	74.457	ENSELUG00000023287	raver1	100	73.197	Esox_lucius
ENSACLG00000018492	raver1	63	85.417	ENSFCAG00000009435	RAVER1	70	85.417	Felis_catus
ENSACLG00000018492	raver1	90	50.275	ENSFDAG00000015113	RAVER1	97	50.068	Fukomys_damarensis
ENSACLG00000018492	raver1	92	67.098	ENSGMOG00000003649	raver1	98	71.408	Gadus_morhua
ENSACLG00000018492	raver1	68	40.947	ENSGALG00000050608	-	51	40.947	Gallus_gallus
ENSACLG00000018492	raver1	95	79.647	ENSGAFG00000015944	raver1	100	79.647	Gambusia_affinis
ENSACLG00000018492	raver1	90	72.517	ENSGACG00000013818	raver1	100	74.286	Gasterosteus_aculeatus
ENSACLG00000018492	raver1	79	66.220	ENSGAGG00000011748	-	96	68.633	Gopherus_agassizii
ENSACLG00000018492	raver1	91	52.006	ENSGGOG00000006015	RAVER1	94	50.962	Gorilla_gorilla
ENSACLG00000018492	raver1	100	99.006	ENSHBUG00000021210	raver1	100	99.006	Haplochromis_burtoni
ENSACLG00000018492	raver1	90	50.275	ENSHGLG00000015460	RAVER1	73	85.417	Heterocephalus_glaber_female
ENSACLG00000018492	raver1	90	50.275	ENSHGLG00100000812	RAVER1	73	85.417	Heterocephalus_glaber_male
ENSACLG00000018492	raver1	100	71.644	ENSHCOG00000000449	raver1	98	76.223	Hippocampus_comes
ENSACLG00000018492	raver1	98	66.338	ENSIPUG00000013153	raver1	100	68.571	Ictalurus_punctatus
ENSACLG00000018492	raver1	91	51.578	ENSSTOG00000003241	RAVER1	96	51.440	Ictidomys_tridecemlineatus
ENSACLG00000018492	raver1	91	50.811	ENSJJAG00000018219	-	72	87.500	Jaculus_jaculus
ENSACLG00000018492	raver1	100	78.912	ENSKMAG00000017355	raver1	100	83.265	Kryptolebias_marmoratus
ENSACLG00000018492	raver1	93	79.010	ENSLBEG00000008268	raver1	96	83.309	Labrus_bergylta
ENSACLG00000018492	raver1	68	91.111	ENSLACG00000005809	-	74	91.111	Latimeria_chalumnae
ENSACLG00000018492	raver1	98	59.428	ENSLOCG00000007500	raver1	100	61.588	Lepisosteus_oculatus
ENSACLG00000018492	raver1	68	54.428	ENSLAFG00000003664	-	82	52.865	Loxodonta_africana
ENSACLG00000018492	raver1	68	60.905	ENSMFAG00000037977	RAVER1	94	51.374	Macaca_fascicularis
ENSACLG00000018492	raver1	68	60.905	ENSMMUG00000014897	RAVER1	65	62.972	Macaca_mulatta
ENSACLG00000018492	raver1	68	60.905	ENSMNEG00000028390	RAVER1	64	60.575	Macaca_nemestrina
ENSACLG00000018492	raver1	68	61.111	ENSMLEG00000041959	RAVER1	64	60.780	Mandrillus_leucophaeus
ENSACLG00000018492	raver1	94	83.126	ENSMAMG00000012059	raver1	100	82.970	Mastacembelus_armatus
ENSACLG00000018492	raver1	100	99.857	ENSMZEG00005019002	raver1	100	99.863	Maylandia_zebra
ENSACLG00000018492	raver1	76	87.500	ENSMAUG00000017948	-	74	87.500	Mesocricetus_auratus
ENSACLG00000018492	raver1	91	52.450	ENSMICG00000010326	RAVER1	96	51.739	Microcebus_murinus
ENSACLG00000018492	raver1	76	87.500	ENSMOCG00000015553	-	73	87.500	Microtus_ochrogaster
ENSACLG00000018492	raver1	94	83.679	ENSMMOG00000012093	raver1	100	82.698	Mola_mola
ENSACLG00000018492	raver1	88	50.966	ENSMODG00000005584	-	85	51.729	Monodelphis_domestica
ENSACLG00000018492	raver1	95	81.361	ENSMALG00000016569	raver1	100	81.361	Monopterus_albus
ENSACLG00000018492	raver1	76	58.586	MGP_CAROLIEiJ_G0031860	-	78	65.823	Mus_caroli
ENSACLG00000018492	raver1	76	87.500	ENSMUSG00000010205	Raver1	74	87.500	Mus_musculus
ENSACLG00000018492	raver1	76	87.500	MGP_PahariEiJ_G0014726	-	74	87.500	Mus_pahari
ENSACLG00000018492	raver1	76	87.500	MGP_SPRETEiJ_G0032984	-	74	87.500	Mus_spretus
ENSACLG00000018492	raver1	74	85.417	ENSMPUG00000006712	RAVER1	70	85.417	Mustela_putorius_furo
ENSACLG00000018492	raver1	91	51.275	ENSMLUG00000012328	RAVER1	96	51.977	Myotis_lucifugus
ENSACLG00000018492	raver1	56	65.063	ENSNGAG00000001260	-	96	48.493	Nannospalax_galili
ENSACLG00000018492	raver1	100	85.165	ENSNBRG00000010139	raver1	100	89.178	Neolamprologus_brichardi
ENSACLG00000018492	raver1	68	60.700	ENSNLEG00000012181	RAVER1	64	60.370	Nomascus_leucogenys
ENSACLG00000018492	raver1	70	91.667	ENSMEUG00000003281	-	76	91.667	Notamacropus_eugenii
ENSACLG00000018492	raver1	64	85.417	ENSODEG00000016260	RAVER1	68	85.417	Octodon_degus
ENSACLG00000018492	raver1	92	92.492	ENSONIG00000001559	raver1	99	94.805	Oreochromis_niloticus
ENSACLG00000018492	raver1	75	85.417	ENSOCUG00000020918	RAVER1	73	85.417	Oryctolagus_cuniculus
ENSACLG00000018492	raver1	95	80.355	ENSORLG00000005458	raver1	100	80.355	Oryzias_latipes
ENSACLG00000018492	raver1	95	80.218	ENSORLG00020004392	raver1	100	80.218	Oryzias_latipes_hni
ENSACLG00000018492	raver1	95	80.764	ENSORLG00015017222	raver1	100	80.764	Oryzias_latipes_hsok
ENSACLG00000018492	raver1	100	76.136	ENSOMEG00000023956	raver1	100	93.878	Oryzias_melastigma
ENSACLG00000018492	raver1	75	85.417	ENSOGAG00000011071	RAVER1	71	85.417	Otolemur_garnettii
ENSACLG00000018492	raver1	75	85.417	ENSOARG00000015886	RAVER1	70	85.417	Ovis_aries
ENSACLG00000018492	raver1	91	52.006	ENSPPAG00000002611	RAVER1	94	51.099	Pan_paniscus
ENSACLG00000018492	raver1	68	59.674	ENSPPRG00000009912	RAVER1	65	66.917	Panthera_pardus
ENSACLG00000018492	raver1	91	52.006	ENSPTRG00000010466	RAVER1	94	51.099	Pan_troglodytes
ENSACLG00000018492	raver1	68	60.905	ENSPANG00000004122	RAVER1	94	51.310	Papio_anubis
ENSACLG00000018492	raver1	76	87.500	ENSPEMG00000016411	-	74	87.500	Peromyscus_maniculatus_bairdii
ENSACLG00000018492	raver1	91	53.519	ENSPCIG00000018695	-	80	91.667	Phascolarctos_cinereus
ENSACLG00000018492	raver1	100	73.271	ENSPFOG00000007016	raver1	100	78.905	Poecilia_formosa
ENSACLG00000018492	raver1	100	72.283	ENSPLAG00000020793	raver1	99	78.490	Poecilia_latipinna
ENSACLG00000018492	raver1	100	76.111	ENSPMEG00000011220	raver1	100	80.461	Poecilia_mexicana
ENSACLG00000018492	raver1	100	78.390	ENSPREG00000006864	raver1	100	77.260	Poecilia_reticulata
ENSACLG00000018492	raver1	91	52.006	ENSPPYG00000010514	RAVER1	80	51.524	Pongo_abelii
ENSACLG00000018492	raver1	75	85.417	ENSPCOG00000026605	RAVER1	70	85.417	Propithecus_coquereli
ENSACLG00000018492	raver1	74	85.417	ENSPVAG00000003689	RAVER1	72	85.417	Pteropus_vampyrus
ENSACLG00000018492	raver1	100	92.168	ENSPNYG00000013284	raver1	100	92.867	Pundamilia_nyererei
ENSACLG00000018492	raver1	98	69.241	ENSPNAG00000015476	raver1	100	68.759	Pygocentrus_nattereri
ENSACLG00000018492	raver1	91	49.593	ENSRNOG00000020710	Raver1	68	58.171	Rattus_norvegicus
ENSACLG00000018492	raver1	75	85.417	ENSRBIG00000034702	RAVER1	69	85.417	Rhinopithecus_bieti
ENSACLG00000018492	raver1	91	53.669	ENSRROG00000031186	RAVER1	94	52.790	Rhinopithecus_roxellana
ENSACLG00000018492	raver1	91	53.592	ENSSBOG00000023423	RAVER1	94	51.857	Saimiri_boliviensis_boliviensis
ENSACLG00000018492	raver1	85	52.879	ENSSHAG00000008181	-	76	91.667	Sarcophilus_harrisii
ENSACLG00000018492	raver1	94	84.414	ENSSMAG00000004546	raver1	100	84.239	Scophthalmus_maximus
ENSACLG00000018492	raver1	94	87.414	ENSSDUG00000021063	raver1	100	87.193	Seriola_dumerili
ENSACLG00000018492	raver1	94	87.414	ENSSLDG00000014505	raver1	100	87.193	Seriola_lalandi_dorsalis
ENSACLG00000018492	raver1	94	88.797	ENSSPAG00000000688	raver1	100	88.692	Stegastes_partitus
ENSACLG00000018492	raver1	70	77.193	ENSSSCG00000013650	-	78	77.193	Sus_scrofa
ENSACLG00000018492	raver1	94	79.172	ENSTRUG00000025641	raver1	100	78.261	Takifugu_rubripes
ENSACLG00000018492	raver1	63	85.417	ENSTTRG00000009552	RAVER1	72	85.417	Tursiops_truncatus
ENSACLG00000018492	raver1	75	85.417	ENSUAMG00000020385	RAVER1	70	85.417	Ursus_americanus
ENSACLG00000018492	raver1	91	51.909	ENSVVUG00000028976	RAVER1	94	51.494	Vulpes_vulpes
ENSACLG00000018492	raver1	90	51.679	ENSXETG00000011622	raver1	94	50.877	Xenopus_tropicalis
ENSACLG00000018492	raver1	95	80.868	ENSXCOG00000016368	raver1	100	80.868	Xiphophorus_couchianus
ENSACLG00000018492	raver1	95	80.868	ENSXMAG00000000217	raver1	100	80.868	Xiphophorus_maculatus