EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000018493 (Gene tree)
Gene ID: 113007395
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 21485 bases
Position: chr16:7793642-7815126
Accession: 113007395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000027194	RNase_Zc3h12a	PF11977.8	6.2e-65	1	1
ENSACLP00000027208	RNase_Zc3h12a	PF11977.8	6.2e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000027844	-	3451	-	ENSACLP00000027208	904 (aa)	XP_025999696	UPI000E400401
ENSACLT00000027830	-	3016	-	ENSACLP00000027194	904 (aa)	XP_025999696	UPI000E400401

Gene Model

Click here to download ENSACLG00000018493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018493's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000018493	-	99	44.138	ENSACLG00000027924	-	64	53.736

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018493	-	71	53.324	ENSAPOG00000015355	-	67	54.693	Acanthochromis_polyacanthus
ENSACLG00000018493	-	98	65.955	ENSAPOG00000001632	-	99	77.949	Acanthochromis_polyacanthus
ENSACLG00000018493	-	76	64.583	ENSACIG00000001362	-	79	56.557	Amphilophus_citrinellus
ENSACLG00000018493	-	99	45.200	ENSAOCG00000003866	-	93	74.206	Amphiprion_ocellaris
ENSACLG00000018493	-	66	56.782	ENSAPEG00000018582	-	76	64.045	Amphiprion_percula
ENSACLG00000018493	-	99	44.974	ENSAPEG00000005727	-	94	64.744	Amphiprion_percula
ENSACLG00000018493	-	100	65.409	ENSATEG00000002260	-	93	85.441	Anabas_testudineus
ENSACLG00000018493	-	99	44.653	ENSATEG00000004134	-	64	53.981	Anabas_testudineus
ENSACLG00000018493	-	100	59.531	ENSCSEG00000008542	-	99	59.765	Cynoglossus_semilaevis
ENSACLG00000018493	-	60	61.066	ENSCSEG00000010073	-	80	78.723	Cynoglossus_semilaevis
ENSACLG00000018493	-	99	53.904	ENSELUG00000005470	-	99	54.915	Esox_lucius
ENSACLG00000018493	-	53	58.133	ENSFALG00000000890	ZC3H12A	78	57.520	Ficedula_albicollis
ENSACLG00000018493	-	55	71.111	ENSFHEG00000021225	-	82	66.887	Fundulus_heteroclitus
ENSACLG00000018493	-	73	52.624	ENSGMOG00000017975	-	99	51.118	Gadus_morhua
ENSACLG00000018493	-	59	54.588	ENSGALG00000002021	ZC3H12A	74	54.312	Gallus_gallus
ENSACLG00000018493	-	65	53.084	ENSGAFG00000005290	-	64	52.970	Gambusia_affinis
ENSACLG00000018493	-	74	59.043	ENSGACG00000001339	-	99	57.808	Gasterosteus_aculeatus
ENSACLG00000018493	-	73	45.845	ENSGACG00000014201	-	69	63.248	Gasterosteus_aculeatus
ENSACLG00000018493	-	99	43.953	ENSHBUG00000006831	-	64	53.736	Haplochromis_burtoni
ENSACLG00000018493	-	71	61.702	ENSHCOG00000008878	-	86	51.741	Hippocampus_comes
ENSACLG00000018493	-	99	44.842	ENSKMAG00000011694	-	63	53.387	Kryptolebias_marmoratus
ENSACLG00000018493	-	100	68.858	ENSLBEG00000012710	-	100	68.534	Labrus_bergylta
ENSACLG00000018493	-	85	48.736	ENSLBEG00000012554	-	84	70.588	Labrus_bergylta
ENSACLG00000018493	-	64	52.905	ENSLACG00000017365	ZC3H12A	68	67.628	Latimeria_chalumnae
ENSACLG00000018493	-	100	68.285	ENSMAMG00000020372	-	100	68.285	Mastacembelus_armatus
ENSACLG00000018493	-	74	59.722	ENSMAMG00000021794	-	94	69.935	Mastacembelus_armatus
ENSACLG00000018493	-	99	44.039	ENSMZEG00005007718	-	64	53.736	Maylandia_zebra
ENSACLG00000018493	-	100	99.447	ENSMZEG00005019137	-	100	99.447	Maylandia_zebra
ENSACLG00000018493	-	65	53.756	ENSMGAG00000003371	ZC3H12A	96	53.488	Meleagris_gallopavo
ENSACLG00000018493	-	85	47.270	ENSMMOG00000005728	-	86	66.887	Mola_mola
ENSACLG00000018493	-	100	63.399	ENSMMOG00000019526	-	94	63.210	Mola_mola
ENSACLG00000018493	-	50	63.261	ENSMALG00000010501	-	64	54.240	Monopterus_albus
ENSACLG00000018493	-	99	44.390	ENSNBRG00000006978	-	64	53.651	Neolamprologus_brichardi
ENSACLG00000018493	-	100	97.566	ENSNBRG00000012175	-	100	97.566	Neolamprologus_brichardi
ENSACLG00000018493	-	99	44.970	ENSONIG00000012268	-	78	64.163	Oreochromis_niloticus
ENSACLG00000018493	-	99	40.276	ENSORLG00000029243	-	76	46.914	Oryzias_latipes
ENSACLG00000018493	-	99	45.389	ENSORLG00020017005	-	64	53.160	Oryzias_latipes_hni
ENSACLG00000018493	-	99	43.354	ENSORLG00015015211	-	64	53.387	Oryzias_latipes_hsok
ENSACLG00000018493	-	99	44.456	ENSOMEG00000006666	-	64	53.226	Oryzias_melastigma
ENSACLG00000018493	-	60	64.286	ENSPMGG00000020126	-	58	66.295	Periophthalmus_magnuspinnatus
ENSACLG00000018493	-	99	44.637	ENSPLAG00000009867	-	64	53.746	Poecilia_latipinna
ENSACLG00000018493	-	99	44.057	ENSPMEG00000006624	-	64	53.583	Poecilia_mexicana
ENSACLG00000018493	-	100	62.595	ENSPMEG00000011676	-	100	62.703	Poecilia_mexicana
ENSACLG00000018493	-	98	61.758	ENSPREG00000001607	-	76	86.207	Poecilia_reticulata
ENSACLG00000018493	-	99	44.262	ENSPREG00000010838	-	64	53.018	Poecilia_reticulata
ENSACLG00000018493	-	100	68.303	ENSSMAG00000007258	-	99	68.844	Scophthalmus_maximus
ENSACLG00000018493	-	99	44.990	ENSSMAG00000007545	-	65	53.555	Scophthalmus_maximus
ENSACLG00000018493	-	100	67.093	ENSSDUG00000013237	-	99	73.529	Seriola_dumerili
ENSACLG00000018493	-	99	44.773	ENSSLDG00000012268	-	64	54.717	Seriola_lalandi_dorsalis
ENSACLG00000018493	-	100	70.488	ENSSLDG00000004886	-	100	71.337	Seriola_lalandi_dorsalis
ENSACLG00000018493	-	100	71.383	ENSSPAG00000001850	-	100	71.919	Stegastes_partitus
ENSACLG00000018493	-	85	49.043	ENSSPAG00000009485	-	64	54.803	Stegastes_partitus
ENSACLG00000018493	-	65	51.969	ENSTRUG00000022519	-	64	53.600	Takifugu_rubripes
ENSACLG00000018493	-	99	43.505	ENSXMAG00000027171	-	64	52.751	Xiphophorus_maculatus
ENSACLG00000018493	-	99	61.480	ENSXMAG00000014715	-	85	86.580	Xiphophorus_maculatus