EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000018515 (Gene tree)
Gene ID: 113014865
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 11708 bases
Position: chr22:34672114-34683821
Accession: 113014865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000027228	RRM_1	PF00076.22	4.2e-27	1	2
ENSACLP00000027228	RRM_1	PF00076.22	4.2e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000027865	-	3084	-	ENSACLP00000027228	303 (aa)	XP_026012435	UPI00032A1E0A

Gene Model

Click here to download ENSACLG00000018515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000018515	trnau1apa	98	43.902	ENSACLG00000003016	trnau1apb	98	43.865
ENSACLG00000018515	trnau1apa	56	30.286	ENSACLG00000026467	tia1l	59	30.286
ENSACLG00000018515	trnau1apa	64	31.056	ENSACLG00000014335	pabpc1b	54	31.447
ENSACLG00000018515	trnau1apa	61	30.000	ENSACLG00000002317	-	65	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018515	trnau1apa	98	60.403	ENSG00000180098	TRNAU1AP	98	59.000	Homo_sapiens
ENSACLG00000018515	trnau1apa	100	87.702	ENSAPOG00000007148	TRNAU1AP	100	87.702	Acanthochromis_polyacanthus
ENSACLG00000018515	trnau1apa	98	60.738	ENSAMEG00000011367	TRNAU1AP	98	59.333	Ailuropoda_melanoleuca
ENSACLG00000018515	trnau1apa	100	93.115	ENSACIG00000004161	trnau1apa	100	93.115	Amphilophus_citrinellus
ENSACLG00000018515	trnau1apa	100	89.902	ENSAOCG00000008056	trnau1apa	100	89.902	Amphiprion_ocellaris
ENSACLG00000018515	trnau1apa	100	89.902	ENSAPEG00000008868	trnau1apa	100	89.902	Amphiprion_percula
ENSACLG00000018515	trnau1apa	100	83.228	ENSATEG00000012140	trnau1apa	100	82.911	Anabas_testudineus
ENSACLG00000018515	trnau1apa	92	61.268	ENSAPLG00000002606	TRNAU1AP	98	60.563	Anas_platyrhynchos
ENSACLG00000018515	trnau1apa	94	51.186	ENSACAG00000003995	-	98	51.178	Anolis_carolinensis
ENSACLG00000018515	trnau1apa	74	39.111	ENSACAG00000004205	-	80	39.111	Anolis_carolinensis
ENSACLG00000018515	trnau1apa	98	60.403	ENSANAG00000018976	TRNAU1AP	98	59.000	Aotus_nancymaae
ENSACLG00000018515	trnau1apa	99	56.026	ENSAMXG00000013750	trnau1apa	97	55.049	Astyanax_mexicanus
ENSACLG00000018515	trnau1apa	94	71.591	ENSAMXG00000029240	-	97	71.591	Astyanax_mexicanus
ENSACLG00000018515	trnau1apa	98	60.067	ENSBTAG00000010393	TRNAU1AP	98	58.667	Bos_taurus
ENSACLG00000018515	trnau1apa	98	60.403	ENSCJAG00000009717	TRNAU1AP	98	59.000	Callithrix_jacchus
ENSACLG00000018515	trnau1apa	98	60.403	ENSCAFG00000011735	TRNAU1AP	98	59.000	Canis_familiaris
ENSACLG00000018515	trnau1apa	98	60.403	ENSCAFG00020023584	TRNAU1AP	98	59.000	Canis_lupus_dingo
ENSACLG00000018515	trnau1apa	99	59.801	ENSCHIG00000023215	TRNAU1AP	99	58.416	Capra_hircus
ENSACLG00000018515	trnau1apa	98	60.403	ENSTSYG00000003506	TRNAU1AP	98	59.000	Carlito_syrichta
ENSACLG00000018515	trnau1apa	98	60.403	ENSCPOG00000001925	TRNAU1AP	98	59.000	Cavia_porcellus
ENSACLG00000018515	trnau1apa	98	60.403	ENSCCAG00000037506	TRNAU1AP	98	59.000	Cebus_capucinus
ENSACLG00000018515	trnau1apa	98	60.403	ENSCATG00000044617	TRNAU1AP	98	59.000	Cercocebus_atys
ENSACLG00000018515	trnau1apa	98	59.801	ENSCLAG00000008223	TRNAU1AP	98	59.468	Chinchilla_lanigera
ENSACLG00000018515	trnau1apa	98	60.403	ENSCSAG00000001014	TRNAU1AP	98	59.000	Chlorocebus_sabaeus
ENSACLG00000018515	trnau1apa	94	57.931	ENSCPBG00000000121	TRNAU1AP	99	60.345	Chrysemys_picta_bellii
ENSACLG00000018515	trnau1apa	52	49.375	ENSCSAVG00000011781	-	84	49.375	Ciona_savignyi
ENSACLG00000018515	trnau1apa	98	51.495	ENSCANG00000041949	TRNAU1AP	98	52.604	Colobus_angolensis_palliatus
ENSACLG00000018515	trnau1apa	98	60.403	ENSCGRG00001004713	Trnau1ap	98	59.000	Cricetulus_griseus_chok1gshd
ENSACLG00000018515	trnau1apa	98	60.403	ENSCGRG00000014532	Trnau1ap	98	59.000	Cricetulus_griseus_crigri
ENSACLG00000018515	trnau1apa	100	75.641	ENSCSEG00000006663	trnau1apa	100	75.962	Cynoglossus_semilaevis
ENSACLG00000018515	trnau1apa	99	79.739	ENSCVAG00000018069	trnau1apa	99	80.719	Cyprinodon_variegatus
ENSACLG00000018515	trnau1apa	99	52.769	ENSDARG00000101323	trnau1apa	95	50.637	Danio_rerio
ENSACLG00000018515	trnau1apa	57	60.345	ENSDNOG00000047959	-	90	60.345	Dasypus_novemcinctus
ENSACLG00000018515	trnau1apa	98	60.403	ENSDNOG00000033009	TRNAU1AP	98	59.000	Dasypus_novemcinctus
ENSACLG00000018515	trnau1apa	98	56.902	ENSDORG00000006349	Trnau1ap	97	60.338	Dipodomys_ordii
ENSACLG00000018515	trnau1apa	94	35.802	FBgn0031607	CG15440	50	48.503	Drosophila_melanogaster
ENSACLG00000018515	trnau1apa	84	56.863	ENSETEG00000012594	TRNAU1AP	98	55.253	Echinops_telfairi
ENSACLG00000018515	trnau1apa	61	46.591	ENSEBUG00000006349	-	63	46.591	Eptatretus_burgeri
ENSACLG00000018515	trnau1apa	98	60.403	ENSEASG00005010062	TRNAU1AP	90	69.863	Equus_asinus_asinus
ENSACLG00000018515	trnau1apa	98	60.403	ENSECAG00000012980	TRNAU1AP	90	69.863	Equus_caballus
ENSACLG00000018515	trnau1apa	100	73.701	ENSELUG00000017686	trnau1apa	100	75.728	Esox_lucius
ENSACLG00000018515	trnau1apa	93	81.818	ENSELUG00000022790	-	95	81.818	Esox_lucius
ENSACLG00000018515	trnau1apa	98	60.403	ENSFCAG00000013401	TRNAU1AP	98	59.000	Felis_catus
ENSACLG00000018515	trnau1apa	94	57.586	ENSFALG00000001371	TRNAU1AP	99	58.621	Ficedula_albicollis
ENSACLG00000018515	trnau1apa	99	59.539	ENSFDAG00000018599	TRNAU1AP	99	58.746	Fukomys_damarensis
ENSACLG00000018515	trnau1apa	78	85.366	ENSFHEG00000018232	trnau1apa	85	85.992	Fundulus_heteroclitus
ENSACLG00000018515	trnau1apa	100	64.725	ENSGMOG00000016508	trnau1apa	99	66.343	Gadus_morhua
ENSACLG00000018515	trnau1apa	69	38.813	ENSGALG00000012721	C2H6orf52	79	39.111	Gallus_gallus
ENSACLG00000018515	trnau1apa	98	58.725	ENSGALG00000001310	-	98	60.067	Gallus_gallus
ENSACLG00000018515	trnau1apa	80	88.163	ENSGAFG00000004928	trnau1apa	97	88.235	Gambusia_affinis
ENSACLG00000018515	trnau1apa	100	87.213	ENSGACG00000001443	trnau1apa	100	87.213	Gasterosteus_aculeatus
ENSACLG00000018515	trnau1apa	94	57.931	ENSGAGG00000004940	TRNAU1AP	99	60.345	Gopherus_agassizii
ENSACLG00000018515	trnau1apa	98	60.403	ENSGGOG00000003511	TRNAU1AP	98	59.000	Gorilla_gorilla
ENSACLG00000018515	trnau1apa	100	98.052	ENSHBUG00000002510	trnau1apa	100	98.052	Haplochromis_burtoni
ENSACLG00000018515	trnau1apa	98	59.801	ENSHGLG00000010380	TRNAU1AP	98	59.000	Heterocephalus_glaber_female
ENSACLG00000018515	trnau1apa	98	57.807	ENSHGLG00100012699	TRNAU1AP	98	57.000	Heterocephalus_glaber_male
ENSACLG00000018515	trnau1apa	99	73.786	ENSHCOG00000014770	trnau1apa	99	71.845	Hippocampus_comes
ENSACLG00000018515	trnau1apa	98	60.403	ENSSTOG00000000079	TRNAU1AP	98	59.000	Ictidomys_tridecemlineatus
ENSACLG00000018515	trnau1apa	98	60.403	ENSJJAG00000010128	Trnau1ap	98	58.667	Jaculus_jaculus
ENSACLG00000018515	trnau1apa	100	82.792	ENSKMAG00000001230	trnau1apa	100	84.091	Kryptolebias_marmoratus
ENSACLG00000018515	trnau1apa	100	80.952	ENSLBEG00000011683	trnau1apa	100	81.962	Labrus_bergylta
ENSACLG00000018515	trnau1apa	99	51.656	ENSLACG00000005541	TRNAU1AP	99	51.656	Latimeria_chalumnae
ENSACLG00000018515	trnau1apa	98	60.201	ENSLOCG00000004041	trnau1apa	99	59.866	Lepisosteus_oculatus
ENSACLG00000018515	trnau1apa	98	60.738	ENSLAFG00000007628	TRNAU1AP	98	59.333	Loxodonta_africana
ENSACLG00000018515	trnau1apa	98	60.403	ENSMFAG00000043751	TRNAU1AP	98	59.000	Macaca_fascicularis
ENSACLG00000018515	trnau1apa	98	60.403	ENSMMUG00000006561	TRNAU1AP	98	59.000	Macaca_mulatta
ENSACLG00000018515	trnau1apa	98	60.403	ENSMNEG00000044201	TRNAU1AP	98	59.000	Macaca_nemestrina
ENSACLG00000018515	trnau1apa	98	60.403	ENSMLEG00000015649	TRNAU1AP	98	59.000	Mandrillus_leucophaeus
ENSACLG00000018515	trnau1apa	99	84.615	ENSMAMG00000001247	trnau1apa	100	84.295	Mastacembelus_armatus
ENSACLG00000018515	trnau1apa	100	100.000	ENSMZEG00005017722	trnau1apa	100	100.000	Maylandia_zebra
ENSACLG00000018515	trnau1apa	96	60.137	ENSMGAG00000002105	TRNAU1AP	99	59.450	Meleagris_gallopavo
ENSACLG00000018515	trnau1apa	98	60.403	ENSMICG00000008386	TRNAU1AP	98	59.000	Microcebus_murinus
ENSACLG00000018515	trnau1apa	98	60.403	ENSMOCG00000011189	Trnau1ap	98	59.000	Microtus_ochrogaster
ENSACLG00000018515	trnau1apa	100	70.874	ENSMMOG00000012107	trnau1apa	99	70.874	Mola_mola
ENSACLG00000018515	trnau1apa	98	59.136	ENSMODG00000010927	TRNAU1AP	98	58.804	Monodelphis_domestica
ENSACLG00000018515	trnau1apa	100	84.887	ENSMALG00000016778	trnau1apa	100	84.887	Monopterus_albus
ENSACLG00000018515	trnau1apa	98	60.403	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	65.823	Mus_caroli
ENSACLG00000018515	trnau1apa	98	60.403	ENSMUSG00000028898	Trnau1ap	92	65.823	Mus_musculus
ENSACLG00000018515	trnau1apa	98	60.403	MGP_PahariEiJ_G0028896	Trnau1ap	84	76.271	Mus_pahari
ENSACLG00000018515	trnau1apa	98	60.403	MGP_SPRETEiJ_G0027544	Trnau1ap	92	65.823	Mus_spretus
ENSACLG00000018515	trnau1apa	99	60.465	ENSMPUG00000015511	TRNAU1AP	99	59.076	Mustela_putorius_furo
ENSACLG00000018515	trnau1apa	98	60.403	ENSMLUG00000012586	TRNAU1AP	98	59.000	Myotis_lucifugus
ENSACLG00000018515	trnau1apa	98	60.403	ENSNGAG00000015881	Trnau1ap	98	59.468	Nannospalax_galili
ENSACLG00000018515	trnau1apa	100	83.333	ENSNBRG00000001758	trnau1apa	99	83.333	Neolamprologus_brichardi
ENSACLG00000018515	trnau1apa	98	60.403	ENSNLEG00000009822	TRNAU1AP	98	59.000	Nomascus_leucogenys
ENSACLG00000018515	trnau1apa	96	59.107	ENSMEUG00000006117	TRNAU1AP	99	58.020	Notamacropus_eugenii
ENSACLG00000018515	trnau1apa	57	64.368	ENSOPRG00000007084	-	58	64.368	Ochotona_princeps
ENSACLG00000018515	trnau1apa	98	60.403	ENSODEG00000002970	TRNAU1AP	98	59.000	Octodon_degus
ENSACLG00000018515	trnau1apa	81	99.184	ENSONIG00000004715	trnau1apa	97	99.184	Oreochromis_niloticus
ENSACLG00000018515	trnau1apa	98	46.358	ENSOANG00000005325	-	98	45.667	Ornithorhynchus_anatinus
ENSACLG00000018515	trnau1apa	86	48.669	ENSOCUG00000006834	-	98	46.768	Oryctolagus_cuniculus
ENSACLG00000018515	trnau1apa	98	50.000	ENSOCUG00000002353	-	98	50.000	Oryctolagus_cuniculus
ENSACLG00000018515	trnau1apa	98	59.060	ENSOCUG00000011704	-	98	57.667	Oryctolagus_cuniculus
ENSACLG00000018515	trnau1apa	100	83.062	ENSORLG00000010428	trnau1apa	100	83.062	Oryzias_latipes
ENSACLG00000018515	trnau1apa	100	83.062	ENSORLG00020000926	trnau1ap	100	83.062	Oryzias_latipes_hni
ENSACLG00000018515	trnau1apa	100	83.062	ENSORLG00015009858	trnau1ap	100	83.062	Oryzias_latipes_hsok
ENSACLG00000018515	trnau1apa	100	82.736	ENSOMEG00000007873	trnau1apa	100	82.736	Oryzias_melastigma
ENSACLG00000018515	trnau1apa	98	60.403	ENSOGAG00000002274	TRNAU1AP	98	59.000	Otolemur_garnettii
ENSACLG00000018515	trnau1apa	99	59.801	ENSOARG00000002843	TRNAU1AP	99	58.416	Ovis_aries
ENSACLG00000018515	trnau1apa	98	60.403	ENSPPAG00000033927	TRNAU1AP	98	59.000	Pan_paniscus
ENSACLG00000018515	trnau1apa	98	60.403	ENSPPRG00000004416	TRNAU1AP	98	59.000	Panthera_pardus
ENSACLG00000018515	trnau1apa	98	60.403	ENSPTIG00000016677	TRNAU1AP	98	59.000	Panthera_tigris_altaica
ENSACLG00000018515	trnau1apa	90	52.727	ENSPTRG00000000434	-	94	51.237	Pan_troglodytes
ENSACLG00000018515	trnau1apa	98	60.403	ENSPANG00000016019	TRNAU1AP	98	59.000	Papio_anubis
ENSACLG00000018515	trnau1apa	97	59.259	ENSPKIG00000015511	trnau1apa	96	59.259	Paramormyrops_kingsleyae
ENSACLG00000018515	trnau1apa	93	81.818	ENSPKIG00000022205	-	95	81.818	Paramormyrops_kingsleyae
ENSACLG00000018515	trnau1apa	94	60.345	ENSPSIG00000006864	TRNAU1AP	99	60.345	Pelodiscus_sinensis
ENSACLG00000018515	trnau1apa	97	70.370	ENSPMGG00000023893	trnau1apa	96	68.814	Periophthalmus_magnuspinnatus
ENSACLG00000018515	trnau1apa	98	60.067	ENSPEMG00000007877	Trnau1ap	98	58.667	Peromyscus_maniculatus_bairdii
ENSACLG00000018515	trnau1apa	56	54.335	ENSPMAG00000000592	trnau1apa	95	54.335	Petromyzon_marinus
ENSACLG00000018515	trnau1apa	74	50.885	ENSPMAG00000005934	trnau1apa	96	49.558	Petromyzon_marinus
ENSACLG00000018515	trnau1apa	99	82.353	ENSPFOG00000008100	trnau1apa	99	83.660	Poecilia_formosa
ENSACLG00000018515	trnau1apa	95	81.633	ENSPLAG00000010236	trnau1apa	99	82.993	Poecilia_latipinna
ENSACLG00000018515	trnau1apa	99	80.328	ENSPMEG00000016387	trnau1apa	97	81.639	Poecilia_mexicana
ENSACLG00000018515	trnau1apa	88	86.667	ENSPREG00000019821	trnau1apa	95	86.667	Poecilia_reticulata
ENSACLG00000018515	trnau1apa	88	51.661	ENSPPYG00000001639	-	99	50.916	Pongo_abelii
ENSACLG00000018515	trnau1apa	97	49.320	ENSPCOG00000023470	-	99	48.475	Propithecus_coquereli
ENSACLG00000018515	trnau1apa	98	60.403	ENSPCOG00000027712	-	98	59.000	Propithecus_coquereli
ENSACLG00000018515	trnau1apa	98	60.403	ENSPVAG00000017214	TRNAU1AP	98	59.000	Pteropus_vampyrus
ENSACLG00000018515	trnau1apa	100	98.377	ENSPNYG00000010130	trnau1apa	100	98.377	Pundamilia_nyererei
ENSACLG00000018515	trnau1apa	99	54.098	ENSPNAG00000024905	trnau1apa	97	54.098	Pygocentrus_nattereri
ENSACLG00000018515	trnau1apa	82	60.887	ENSRNOG00000055344	Trnau1ap	81	59.200	Rattus_norvegicus
ENSACLG00000018515	trnau1apa	98	60.403	ENSRBIG00000029083	TRNAU1AP	98	59.000	Rhinopithecus_bieti
ENSACLG00000018515	trnau1apa	98	60.403	ENSRROG00000029128	TRNAU1AP	98	59.000	Rhinopithecus_roxellana
ENSACLG00000018515	trnau1apa	98	60.403	ENSSBOG00000021299	TRNAU1AP	98	59.000	Saimiri_boliviensis_boliviensis
ENSACLG00000018515	trnau1apa	98	59.136	ENSSHAG00000008108	TRNAU1AP	98	58.804	Sarcophilus_harrisii
ENSACLG00000018515	trnau1apa	100	81.994	ENSSMAG00000020851	trnau1apa	100	83.280	Scophthalmus_maximus
ENSACLG00000018515	trnau1apa	100	83.974	ENSSDUG00000011734	trnau1apa	100	83.974	Seriola_dumerili
ENSACLG00000018515	trnau1apa	100	69.508	ENSSLDG00000012101	trnau1apa	99	69.508	Seriola_lalandi_dorsalis
ENSACLG00000018515	trnau1apa	96	60.481	ENSSARG00000007536	TRNAU1AP	99	59.524	Sorex_araneus
ENSACLG00000018515	trnau1apa	98	57.718	ENSSPUG00000010400	-	99	56.711	Sphenodon_punctatus
ENSACLG00000018515	trnau1apa	63	54.211	ENSSPUG00000010415	-	99	51.813	Sphenodon_punctatus
ENSACLG00000018515	trnau1apa	100	88.312	ENSSPAG00000005029	trnau1apa	100	87.987	Stegastes_partitus
ENSACLG00000018515	trnau1apa	98	60.403	ENSSSCG00000030284	TRNAU1AP	98	59.000	Sus_scrofa
ENSACLG00000018515	trnau1apa	69	41.827	ENSTGUG00000005908	-	99	40.952	Taeniopygia_guttata
ENSACLG00000018515	trnau1apa	96	59.107	ENSTGUG00000000735	-	99	59.524	Taeniopygia_guttata
ENSACLG00000018515	trnau1apa	100	83.388	ENSTRUG00000003352	trnau1apa	100	81.433	Takifugu_rubripes
ENSACLG00000018515	trnau1apa	100	77.670	ENSTNIG00000006129	trnau1apa	100	77.670	Tetraodon_nigroviridis
ENSACLG00000018515	trnau1apa	84	52.549	ENSTBEG00000008049	-	98	52.918	Tupaia_belangeri
ENSACLG00000018515	trnau1apa	98	60.403	ENSTTRG00000001854	TRNAU1AP	98	59.000	Tursiops_truncatus
ENSACLG00000018515	trnau1apa	94	60.279	ENSUAMG00000008789	TRNAU1AP	99	58.824	Ursus_americanus
ENSACLG00000018515	trnau1apa	98	60.403	ENSUMAG00000011068	TRNAU1AP	98	61.074	Ursus_maritimus
ENSACLG00000018515	trnau1apa	98	52.396	ENSVPAG00000006778	TRNAU1AP	99	51.603	Vicugna_pacos
ENSACLG00000018515	trnau1apa	98	59.596	ENSVVUG00000012518	TRNAU1AP	92	58.194	Vulpes_vulpes
ENSACLG00000018515	trnau1apa	99	83.007	ENSXMAG00000017361	trnau1apa	99	84.314	Xiphophorus_maculatus