EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000018534 (Gene tree)
Gene ID: 113037174
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type containing 12D
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 10220 bases
Position: chr15:28414490-28424709
Accession: 113037174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000027255	RNase_Zc3h12a	PF11977.8	5.1e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000027891	-	2074	-	ENSACLP00000027255	600 (aa)	XP_026049728	UPI0003AFA23B

Gene Model

Click here to download ENSACLG00000018534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000018534	-	96	38.534	ENSACLG00000027801	zc3h12a	56	52.446
ENSACLG00000018534	-	93	38.325	ENSACLG00000004488	si:dkey-206d17.12	89	38.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018534	-	51	61.093	ENSG00000163874	ZC3H12A	86	58.197	Homo_sapiens
ENSACLG00000018534	-	100	75.288	ENSAPOG00000005848	-	100	76.771	Acanthochromis_polyacanthus
ENSACLG00000018534	-	51	60.968	ENSAMEG00000000991	ZC3H12A	95	42.036	Ailuropoda_melanoleuca
ENSACLG00000018534	-	95	38.915	ENSACIG00000017750	zc3h12a	52	56.308	Amphilophus_citrinellus
ENSACLG00000018534	-	94	40.309	ENSACIG00000004135	si:dkey-206d17.12	80	54.978	Amphilophus_citrinellus
ENSACLG00000018534	-	99	86.622	ENSACIG00000006790	-	98	86.622	Amphilophus_citrinellus
ENSACLG00000018534	-	100	75.288	ENSAOCG00000009106	-	100	77.265	Amphiprion_ocellaris
ENSACLG00000018534	-	53	55.655	ENSAOCG00000003866	-	97	51.852	Amphiprion_ocellaris
ENSACLG00000018534	-	100	75.288	ENSAPEG00000004229	-	100	77.265	Amphiprion_percula
ENSACLG00000018534	-	53	55.655	ENSAPEG00000005727	-	94	44.586	Amphiprion_percula
ENSACLG00000018534	-	94	71.675	ENSATEG00000013053	-	80	91.743	Anabas_testudineus
ENSACLG00000018534	-	51	58.075	ENSATEG00000009946	zc3h12a	51	58.075	Anabas_testudineus
ENSACLG00000018534	-	50	60.714	ENSANAG00000009908	ZC3H12A	86	57.551	Aotus_nancymaae
ENSACLG00000018534	-	94	51.347	ENSAMXG00000030754	-	99	51.347	Astyanax_mexicanus
ENSACLG00000018534	-	51	55.312	ENSAMXG00000001736	zc3h12a	51	55.312	Astyanax_mexicanus
ENSACLG00000018534	-	51	60.450	ENSBTAG00000011316	ZC3H12A	98	41.503	Bos_taurus
ENSACLG00000018534	-	53	60.736	ENSCJAG00000041792	ZC3H12A	53	60.736	Callithrix_jacchus
ENSACLG00000018534	-	58	56.787	ENSCAFG00000003304	ZC3H12A	98	40.777	Canis_familiaris
ENSACLG00000018534	-	58	56.787	ENSCAFG00020008620	ZC3H12A	98	40.777	Canis_lupus_dingo
ENSACLG00000018534	-	51	60.129	ENSCHIG00000021957	ZC3H12A	53	60.129	Capra_hircus
ENSACLG00000018534	-	51	61.238	ENSTSYG00000035959	ZC3H12A	95	41.556	Carlito_syrichta
ENSACLG00000018534	-	57	57.803	ENSCAPG00000015365	ZC3H12A	99	41.695	Cavia_aperea
ENSACLG00000018534	-	57	57.225	ENSCPOG00000011081	ZC3H12A	99	41.356	Cavia_porcellus
ENSACLG00000018534	-	50	61.238	ENSCCAG00000023848	ZC3H12A	51	61.364	Cebus_capucinus
ENSACLG00000018534	-	51	61.218	ENSCATG00000037700	ZC3H12A	85	58.367	Cercocebus_atys
ENSACLG00000018534	-	51	60.968	ENSCLAG00000008722	ZC3H12A	52	60.968	Chinchilla_lanigera
ENSACLG00000018534	-	51	61.218	ENSCSAG00000001106	ZC3H12A	95	41.762	Chlorocebus_sabaeus
ENSACLG00000018534	-	51	60.897	ENSCANG00000042287	ZC3H12A	85	57.959	Colobus_angolensis_palliatus
ENSACLG00000018534	-	98	41.516	ENSCGRG00001015497	Zc3h12a	95	41.516	Cricetulus_griseus_chok1gshd
ENSACLG00000018534	-	98	41.516	ENSCGRG00000013149	Zc3h12a	95	41.516	Cricetulus_griseus_crigri
ENSACLG00000018534	-	99	39.482	ENSCSEG00000019043	zc3h12a	99	38.746	Cynoglossus_semilaevis
ENSACLG00000018534	-	93	41.047	ENSCSEG00000010348	si:dkey-206d17.12	89	41.047	Cynoglossus_semilaevis
ENSACLG00000018534	-	94	67.730	ENSCVAG00000001077	-	91	81.070	Cyprinodon_variegatus
ENSACLG00000018534	-	96	37.684	ENSCVAG00000001516	si:dkey-206d17.12	94	37.684	Cyprinodon_variegatus
ENSACLG00000018534	-	50	57.595	ENSDARG00000101034	si:dkey-206d17.12	52	55.952	Danio_rerio
ENSACLG00000018534	-	50	61.639	ENSDORG00000012666	Zc3h12a	93	41.899	Dipodomys_ordii
ENSACLG00000018534	-	51	61.093	ENSEASG00005012220	ZC3H12A	98	42.599	Equus_asinus_asinus
ENSACLG00000018534	-	51	61.093	ENSECAG00000009562	ZC3H12A	92	42.504	Equus_caballus
ENSACLG00000018534	-	94	39.502	ENSELUG00000018274	zc3h12a	96	39.470	Esox_lucius
ENSACLG00000018534	-	95	54.120	ENSELUG00000018728	-	92	53.635	Esox_lucius
ENSACLG00000018534	-	51	60.645	ENSFCAG00000008757	ZC3H12A	95	42.339	Felis_catus
ENSACLG00000018534	-	94	40.759	ENSFALG00000000890	ZC3H12A	97	40.759	Ficedula_albicollis
ENSACLG00000018534	-	93	39.358	ENSFHEG00000001174	si:dkey-206d17.12	92	39.130	Fundulus_heteroclitus
ENSACLG00000018534	-	94	67.135	ENSFHEG00000011425	-	99	66.608	Fundulus_heteroclitus
ENSACLG00000018534	-	50	54.333	ENSGMOG00000017603	si:dkey-206d17.12	61	54.333	Gadus_morhua
ENSACLG00000018534	-	94	36.860	ENSGMOG00000007388	-	99	38.614	Gadus_morhua
ENSACLG00000018534	-	94	66.841	ENSGAFG00000009523	-	99	66.899	Gambusia_affinis
ENSACLG00000018534	-	93	39.236	ENSGAFG00000019001	si:dkey-206d17.12	93	39.236	Gambusia_affinis
ENSACLG00000018534	-	94	40.652	ENSGACG00000002341	si:dkey-206d17.12	63	52.857	Gasterosteus_aculeatus
ENSACLG00000018534	-	52	84.395	ENSGACG00000006636	-	99	84.395	Gasterosteus_aculeatus
ENSACLG00000018534	-	51	61.093	ENSGGOG00000009268	ZC3H12A	95	42.193	Gorilla_gorilla
ENSACLG00000018534	-	93	38.825	ENSHBUG00000017076	si:dkey-206d17.12	89	39.052	Haplochromis_burtoni
ENSACLG00000018534	-	100	99.500	ENSHBUG00000021584	-	100	99.500	Haplochromis_burtoni
ENSACLG00000018534	-	95	41.368	ENSHGLG00000012808	ZC3H12A	92	41.356	Heterocephalus_glaber_female
ENSACLG00000018534	-	95	41.368	ENSHGLG00100002244	ZC3H12A	92	41.356	Heterocephalus_glaber_male
ENSACLG00000018534	-	94	39.968	ENSIPUG00000015158	Zc3h12a	98	39.905	Ictalurus_punctatus
ENSACLG00000018534	-	94	52.166	ENSIPUG00000011663	-	99	52.028	Ictalurus_punctatus
ENSACLG00000018534	-	51	61.218	ENSSTOG00000026842	ZC3H12A	52	61.218	Ictidomys_tridecemlineatus
ENSACLG00000018534	-	94	42.301	ENSJJAG00000004252	Zc3h12a	92	42.615	Jaculus_jaculus
ENSACLG00000018534	-	69	47.248	ENSKMAG00000013650	zc3h12a	64	47.248	Kryptolebias_marmoratus
ENSACLG00000018534	-	93	66.370	ENSKMAG00000014401	-	98	65.836	Kryptolebias_marmoratus
ENSACLG00000018534	-	97	38.556	ENSLBEG00000027429	zc3h12a	99	38.132	Labrus_bergylta
ENSACLG00000018534	-	94	69.896	ENSLBEG00000012121	-	99	69.550	Labrus_bergylta
ENSACLG00000018534	-	93	36.409	ENSLBEG00000017593	si:dkey-206d17.12	95	36.949	Labrus_bergylta
ENSACLG00000018534	-	94	43.573	ENSLACG00000017365	ZC3H12A	52	63.898	Latimeria_chalumnae
ENSACLG00000018534	-	94	49.647	ENSLOCG00000017000	-	99	50.615	Lepisosteus_oculatus
ENSACLG00000018534	-	50	60.968	ENSLAFG00000018720	ZC3H12A	94	41.402	Loxodonta_africana
ENSACLG00000018534	-	51	61.218	ENSMFAG00000032647	ZC3H12A	85	58.367	Macaca_fascicularis
ENSACLG00000018534	-	51	61.218	ENSMMUG00000010323	ZC3H12A	95	41.993	Macaca_mulatta
ENSACLG00000018534	-	51	61.218	ENSMLEG00000034570	ZC3H12A	85	58.367	Mandrillus_leucophaeus
ENSACLG00000018534	-	100	72.330	ENSMAMG00000004463	-	90	88.136	Mastacembelus_armatus
ENSACLG00000018534	-	92	39.478	ENSMAMG00000004483	si:dkey-206d17.12	88	38.825	Mastacembelus_armatus
ENSACLG00000018534	-	96	40.063	ENSMAMG00000007494	zc3h12a	50	58.599	Mastacembelus_armatus
ENSACLG00000018534	-	96	38.534	ENSMZEG00005006997	zc3h12a	56	52.446	Maylandia_zebra
ENSACLG00000018534	-	100	99.833	ENSMZEG00005015555	-	100	99.833	Maylandia_zebra
ENSACLG00000018534	-	93	38.325	ENSMZEG00005026287	si:dkey-206d17.12	89	38.548	Maylandia_zebra
ENSACLG00000018534	-	95	39.868	ENSMAUG00000012893	Zc3h12a	93	39.737	Mesocricetus_auratus
ENSACLG00000018534	-	58	55.932	ENSMICG00000004790	ZC3H12A	95	41.419	Microcebus_murinus
ENSACLG00000018534	-	95	41.973	ENSMOCG00000001899	Zc3h12a	93	41.973	Microtus_ochrogaster
ENSACLG00000018534	-	92	39.796	ENSMMOG00000013604	si:dkey-206d17.12	96	39.932	Mola_mola
ENSACLG00000018534	-	51	57.895	ENSMMOG00000005728	-	86	46.452	Mola_mola
ENSACLG00000018534	-	95	70.669	ENSMMOG00000014855	-	94	79.098	Mola_mola
ENSACLG00000018534	-	95	40.032	ENSMMOG00000000727	zc3h12a	97	40.857	Mola_mola
ENSACLG00000018534	-	55	51.163	ENSMALG00000012794	si:dkey-206d17.12	54	51.163	Monopterus_albus
ENSACLG00000018534	-	96	68.803	ENSMALG00000018908	-	99	69.257	Monopterus_albus
ENSACLG00000018534	-	98	41.872	MGP_CAROLIEiJ_G0026462	Zc3h12a	95	42.270	Mus_caroli
ENSACLG00000018534	-	98	41.708	ENSMUSG00000042677	Zc3h12a	95	42.434	Mus_musculus
ENSACLG00000018534	-	98	42.529	MGP_PahariEiJ_G0028793	Zc3h12a	95	43.021	Mus_pahari
ENSACLG00000018534	-	98	42.036	MGP_SPRETEiJ_G0027441	Zc3h12a	89	59.216	Mus_spretus
ENSACLG00000018534	-	51	60.323	ENSMPUG00000014758	ZC3H12A	99	41.080	Mustela_putorius_furo
ENSACLG00000018534	-	50	60.586	ENSMLUG00000027279	ZC3H12A	95	41.736	Myotis_lucifugus
ENSACLG00000018534	-	97	41.977	ENSNGAG00000018725	Zc3h12a	96	42.484	Nannospalax_galili
ENSACLG00000018534	-	96	39.043	ENSNBRG00000009607	zc3h12a	57	52.674	Neolamprologus_brichardi
ENSACLG00000018534	-	99	98.487	ENSNBRG00000010961	-	97	98.487	Neolamprologus_brichardi
ENSACLG00000018534	-	93	39.315	ENSNBRG00000014376	si:dkey-206d17.12	97	39.706	Neolamprologus_brichardi
ENSACLG00000018534	-	51	55.921	ENSNLEG00000011545	ZC3H12A	96	38.862	Nomascus_leucogenys
ENSACLG00000018534	-	93	34.087	ENSMEUG00000003389	ZC3H12A	99	34.087	Notamacropus_eugenii
ENSACLG00000018534	-	97	41.667	ENSODEG00000005643	ZC3H12A	94	41.472	Octodon_degus
ENSACLG00000018534	-	96	40.433	ENSONIG00000016235	zc3h12a	98	39.469	Oreochromis_niloticus
ENSACLG00000018534	-	93	39.425	ENSONIG00000013685	si:dkey-206d17.12	89	39.180	Oreochromis_niloticus
ENSACLG00000018534	-	53	60.502	ENSOANG00000002060	ZC3H12A	53	60.502	Ornithorhynchus_anatinus
ENSACLG00000018534	-	50	62.046	ENSOCUG00000010856	ZC3H12A	78	62.046	Oryctolagus_cuniculus
ENSACLG00000018534	-	94	62.872	ENSORLG00000015280	-	99	62.347	Oryzias_latipes
ENSACLG00000018534	-	53	54.938	ENSORLG00000014448	zc3h12a	96	38.341	Oryzias_latipes
ENSACLG00000018534	-	52	54.829	ENSORLG00020016107	-	56	54.829	Oryzias_latipes_hni
ENSACLG00000018534	-	100	60.661	ENSORLG00020008580	-	91	60.720	Oryzias_latipes_hni
ENSACLG00000018534	-	53	55.247	ENSORLG00020019555	zc3h12a	52	55.247	Oryzias_latipes_hni
ENSACLG00000018534	-	53	55.247	ENSORLG00015004539	zc3h12a	89	38.208	Oryzias_latipes_hsok
ENSACLG00000018534	-	94	38.843	ENSORLG00015007634	ZC3H12A	98	39.570	Oryzias_latipes_hsok
ENSACLG00000018534	-	100	60.826	ENSORLG00015003680	-	91	60.393	Oryzias_latipes_hsok
ENSACLG00000018534	-	93	41.087	ENSOMEG00000005602	si:dkey-206d17.12	96	41.087	Oryzias_melastigma
ENSACLG00000018534	-	97	38.725	ENSOMEG00000000483	zc3h12a	95	39.326	Oryzias_melastigma
ENSACLG00000018534	-	94	64.789	ENSOMEG00000011669	-	99	64.437	Oryzias_melastigma
ENSACLG00000018534	-	97	40.527	ENSOGAG00000030940	ZC3H12A	94	40.615	Otolemur_garnettii
ENSACLG00000018534	-	51	59.807	ENSOARG00000019760	ZC3H12A	72	59.807	Ovis_aries
ENSACLG00000018534	-	51	61.415	ENSPPAG00000041054	ZC3H12A	86	58.607	Pan_paniscus
ENSACLG00000018534	-	65	49.061	ENSPPRG00000014359	ZC3H12A	95	42.339	Panthera_pardus
ENSACLG00000018534	-	51	60.645	ENSPTIG00000012943	ZC3H12A	87	57.551	Panthera_tigris_altaica
ENSACLG00000018534	-	51	61.415	ENSPTRG00000000544	ZC3H12A	86	58.607	Pan_troglodytes
ENSACLG00000018534	-	51	60.897	ENSPANG00000011821	ZC3H12A	85	57.959	Papio_anubis
ENSACLG00000018534	-	93	51.273	ENSPKIG00000019720	-	99	50.847	Paramormyrops_kingsleyae
ENSACLG00000018534	-	94	42.333	ENSPSIG00000009198	ZC3H12A	51	64.527	Pelodiscus_sinensis
ENSACLG00000018534	-	52	55.172	ENSPMGG00000004114	zc3h12a	56	55.172	Periophthalmus_magnuspinnatus
ENSACLG00000018534	-	77	38.819	ENSPMGG00000015418	-	91	38.266	Periophthalmus_magnuspinnatus
ENSACLG00000018534	-	98	42.036	ENSPEMG00000024080	Zc3h12a	95	41.708	Peromyscus_maniculatus_bairdii
ENSACLG00000018534	-	94	67.951	ENSPFOG00000004135	-	99	67.951	Poecilia_formosa
ENSACLG00000018534	-	70	36.941	ENSPFOG00000002933	si:dkey-206d17.12	97	35.945	Poecilia_formosa
ENSACLG00000018534	-	94	67.951	ENSPLAG00000001211	-	99	67.951	Poecilia_latipinna
ENSACLG00000018534	-	70	37.176	ENSPLAG00000016243	si:dkey-206d17.12	89	36.175	Poecilia_latipinna
ENSACLG00000018534	-	93	39.965	ENSPMEG00000011188	si:dkey-206d17.12	94	38.937	Poecilia_mexicana
ENSACLG00000018534	-	95	67.882	ENSPREG00000020369	-	95	67.882	Poecilia_reticulata
ENSACLG00000018534	-	51	61.093	ENSPPYG00000001534	ZC3H12A	95	41.941	Pongo_abelii
ENSACLG00000018534	-	57	55.556	ENSPCOG00000015837	ZC3H12A	95	41.254	Propithecus_coquereli
ENSACLG00000018534	-	100	100.000	ENSPNYG00000010663	-	100	100.000	Pundamilia_nyererei
ENSACLG00000018534	-	93	38.825	ENSPNYG00000003297	si:dkey-206d17.12	89	39.052	Pundamilia_nyererei
ENSACLG00000018534	-	94	51.082	ENSPNAG00000012124	-	99	51.167	Pygocentrus_nattereri
ENSACLG00000018534	-	97	41.111	ENSPNAG00000010952	si:dkey-206d17.12	90	40.415	Pygocentrus_nattereri
ENSACLG00000018534	-	98	42.237	ENSRNOG00000009131	Zc3h12a	95	42.571	Rattus_norvegicus
ENSACLG00000018534	-	51	60.897	ENSRBIG00000042237	ZC3H12A	94	40.558	Rhinopithecus_bieti
ENSACLG00000018534	-	51	60.897	ENSRROG00000037444	ZC3H12A	85	57.959	Rhinopithecus_roxellana
ENSACLG00000018534	-	50	61.364	ENSSBOG00000028357	ZC3H12A	51	61.364	Saimiri_boliviensis_boliviensis
ENSACLG00000018534	-	79	42.717	ENSSHAG00000011780	-	99	42.442	Sarcophilus_harrisii
ENSACLG00000018534	-	80	42.911	ENSSFOG00015005925	zc3h12a	96	42.911	Scleropages_formosus
ENSACLG00000018534	-	93	39.303	ENSSMAG00000001367	si:dkey-206d17.12	88	39.073	Scophthalmus_maximus
ENSACLG00000018534	-	94	72.837	ENSSMAG00000017632	-	98	72.664	Scophthalmus_maximus
ENSACLG00000018534	-	94	39.516	ENSSDUG00000007162	si:dkey-206d17.12	53	54.000	Seriola_dumerili
ENSACLG00000018534	-	50	57.556	ENSSDUG00000013237	-	89	51.748	Seriola_dumerili
ENSACLG00000018534	-	100	74.032	ENSSDUG00000010581	-	96	83.534	Seriola_dumerili
ENSACLG00000018534	-	50	57.962	ENSSDUG00000009879	zc3h12a	50	57.962	Seriola_dumerili
ENSACLG00000018534	-	100	73.387	ENSSLDG00000022022	-	100	73.226	Seriola_lalandi_dorsalis
ENSACLG00000018534	-	50	58.280	ENSSLDG00000003826	zc3h12a	50	58.280	Seriola_lalandi_dorsalis
ENSACLG00000018534	-	97	40.794	ENSSPUG00000003668	ZC3H12A	89	40.159	Sphenodon_punctatus
ENSACLG00000018534	-	100	75.453	ENSSPAG00000022537	-	99	76.080	Stegastes_partitus
ENSACLG00000018534	-	55	53.959	ENSSPAG00000020938	si:dkey-206d17.12	91	40.415	Stegastes_partitus
ENSACLG00000018534	-	50	60.912	ENSSSCG00000037815	ZC3H12A	97	41.680	Sus_scrofa
ENSACLG00000018534	-	80	41.782	ENSTGUG00000001563	ZC3H12A	80	50.678	Taeniopygia_guttata
ENSACLG00000018534	-	93	39.519	ENSTRUG00000010565	si:dkey-206d17.12	96	39.519	Takifugu_rubripes
ENSACLG00000018534	-	51	60.645	ENSTTRG00000008591	ZC3H12A	95	41.436	Tursiops_truncatus
ENSACLG00000018534	-	51	60.968	ENSUAMG00000014105	ZC3H12A	95	42.062	Ursus_americanus
ENSACLG00000018534	-	51	60.645	ENSUMAG00000001122	ZC3H12A	98	41.899	Ursus_maritimus
ENSACLG00000018534	-	58	56.787	ENSVVUG00000023171	ZC3H12A	98	42.219	Vulpes_vulpes
ENSACLG00000018534	-	94	67.601	ENSXCOG00000001538	-	91	83.562	Xiphophorus_couchianus
ENSACLG00000018534	-	94	67.832	ENSXMAG00000005023	-	91	83.562	Xiphophorus_maculatus
ENSACLG00000018534	-	65	51.244	ENSXMAG00000014715	-	83	60.793	Xiphophorus_maculatus
ENSACLG00000018534	-	94	37.842	ENSXMAG00000025043	si:dkey-206d17.12	94	37.842	Xiphophorus_maculatus