EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000018569 (Gene tree)
Gene ID: 113021916
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TAR (HIV) RNA binding protein 2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4857 bases
Position: chr5:4402369-4407225
Accession: ZDB-GENE-030131-8085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000027317	dsrm	PF00035.26	6.6e-35	1	2
ENSACLP00000027317	dsrm	PF00035.26	6.6e-35	2	2
ENSACLP00000027317	DND1_DSRM	PF14709.7	6.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000027959	-	1697	-	ENSACLP00000027317	345 (aa)	-	-

Gene Model

Click here to download ENSACLG00000018569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018569's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000018569	tarbp2	97	41.317	ENSACLG00000008370	prkra	98	39.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018569	tarbp2	95	66.189	ENSG00000139546	TARBP2	100	65.507	Homo_sapiens
ENSACLG00000018569	tarbp2	97	93.134	ENSAPOG00000019892	tarbp2	97	93.134	Acanthochromis_polyacanthus
ENSACLG00000018569	tarbp2	95	67.049	ENSAMEG00000012601	TARBP2	95	66.189	Ailuropoda_melanoleuca
ENSACLG00000018569	tarbp2	97	94.925	ENSACIG00000016780	tarbp2	97	94.925	Amphilophus_citrinellus
ENSACLG00000018569	tarbp2	97	93.731	ENSAOCG00000005201	tarbp2	97	93.731	Amphiprion_ocellaris
ENSACLG00000018569	tarbp2	97	93.731	ENSAPEG00000008376	tarbp2	97	93.731	Amphiprion_percula
ENSACLG00000018569	tarbp2	95	93.902	ENSATEG00000025012	tarbp2	97	92.239	Anabas_testudineus
ENSACLG00000018569	tarbp2	95	68.605	ENSACAG00000001100	TARBP2	95	68.314	Anolis_carolinensis
ENSACLG00000018569	tarbp2	95	66.476	ENSANAG00000034453	TARBP2	72	92.982	Aotus_nancymaae
ENSACLG00000018569	tarbp2	97	82.440	ENSAMXG00000016665	tarbp2	95	83.587	Astyanax_mexicanus
ENSACLG00000018569	tarbp2	95	67.049	ENSBTAG00000000435	TARBP2	95	66.762	Bos_taurus
ENSACLG00000018569	tarbp2	95	66.762	ENSCJAG00000018668	TARBP2	95	66.476	Callithrix_jacchus
ENSACLG00000018569	tarbp2	95	69.697	ENSCAFG00000006874	TARBP2	95	69.697	Canis_familiaris
ENSACLG00000018569	tarbp2	95	66.189	ENSCAFG00020020735	TARBP2	100	65.507	Canis_lupus_dingo
ENSACLG00000018569	tarbp2	95	66.856	ENSCHIG00000026017	TARBP2	95	66.289	Capra_hircus
ENSACLG00000018569	tarbp2	95	67.335	ENSTSYG00000035683	TARBP2	72	92.982	Carlito_syrichta
ENSACLG00000018569	tarbp2	63	69.683	ENSCAPG00000008981	TARBP2	98	69.683	Cavia_aperea
ENSACLG00000018569	tarbp2	95	67.335	ENSCPOG00000001009	TARBP2	95	66.762	Cavia_porcellus
ENSACLG00000018569	tarbp2	95	66.476	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSACLG00000018569	tarbp2	95	66.476	ENSCATG00000026344	TARBP2	72	92.982	Cercocebus_atys
ENSACLG00000018569	tarbp2	95	66.382	ENSCLAG00000009175	TARBP2	95	66.762	Chinchilla_lanigera
ENSACLG00000018569	tarbp2	95	66.476	ENSCSAG00000005479	TARBP2	95	65.903	Chlorocebus_sabaeus
ENSACLG00000018569	tarbp2	95	69.767	ENSCPBG00000000654	TARBP2	100	69.412	Chrysemys_picta_bellii
ENSACLG00000018569	tarbp2	95	66.189	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSACLG00000018569	tarbp2	95	66.954	ENSCGRG00001011856	TARBP2	95	66.092	Cricetulus_griseus_chok1gshd
ENSACLG00000018569	tarbp2	95	66.954	ENSCGRG00000009088	TARBP2	100	65.021	Cricetulus_griseus_crigri
ENSACLG00000018569	tarbp2	98	89.021	ENSCSEG00000010631	tarbp2	98	89.021	Cynoglossus_semilaevis
ENSACLG00000018569	tarbp2	97	87.761	ENSCVAG00000009832	tarbp2	97	87.761	Cyprinodon_variegatus
ENSACLG00000018569	tarbp2	95	82.779	ENSDARG00000070471	tarbp2	95	82.779	Danio_rerio
ENSACLG00000018569	tarbp2	95	66.762	ENSDNOG00000002144	TARBP2	95	66.571	Dasypus_novemcinctus
ENSACLG00000018569	tarbp2	63	69.683	ENSDORG00000001390	Tarbp2	91	69.683	Dipodomys_ordii
ENSACLG00000018569	tarbp2	81	93.827	ENSETEG00000002458	TARBP2	72	93.548	Echinops_telfairi
ENSACLG00000018569	tarbp2	95	58.841	ENSEBUG00000002377	tarbp2	98	59.756	Eptatretus_burgeri
ENSACLG00000018569	tarbp2	95	67.335	ENSEASG00005010030	TARBP2	95	67.143	Equus_asinus_asinus
ENSACLG00000018569	tarbp2	95	70.181	ENSECAG00000011695	TARBP2	72	92.982	Equus_caballus
ENSACLG00000018569	tarbp2	79	65.085	ENSEEUG00000001128	-	94	64.407	Erinaceus_europaeus
ENSACLG00000018569	tarbp2	97	83.728	ENSELUG00000010642	tarbp2	97	86.095	Esox_lucius
ENSACLG00000018569	tarbp2	95	66.762	ENSFCAG00000007757	TARBP2	95	67.143	Felis_catus
ENSACLG00000018569	tarbp2	95	68.195	ENSFDAG00000011932	TARBP2	100	66.803	Fukomys_damarensis
ENSACLG00000018569	tarbp2	94	89.506	ENSFHEG00000016118	tarbp2	100	89.506	Fundulus_heteroclitus
ENSACLG00000018569	tarbp2	95	86.970	ENSGMOG00000001290	tarbp2	95	86.970	Gadus_morhua
ENSACLG00000018569	tarbp2	65	70.852	ENSGALG00000038939	-	84	70.852	Gallus_gallus
ENSACLG00000018569	tarbp2	97	88.060	ENSGAFG00000013341	tarbp2	97	88.060	Gambusia_affinis
ENSACLG00000018569	tarbp2	95	87.870	ENSGACG00000006645	tarbp2	95	86.686	Gasterosteus_aculeatus
ENSACLG00000018569	tarbp2	97	68.750	ENSGAGG00000021169	TARBP2	98	68.750	Gopherus_agassizii
ENSACLG00000018569	tarbp2	95	66.189	ENSGGOG00000012637	TARBP2	72	92.982	Gorilla_gorilla
ENSACLG00000018569	tarbp2	97	97.313	ENSHBUG00000018639	tarbp2	97	97.313	Haplochromis_burtoni
ENSACLG00000018569	tarbp2	95	66.382	ENSHGLG00000001284	TARBP2	95	66.762	Heterocephalus_glaber_female
ENSACLG00000018569	tarbp2	95	66.382	ENSHGLG00100011274	TARBP2	95	66.762	Heterocephalus_glaber_male
ENSACLG00000018569	tarbp2	95	87.195	ENSHCOG00000001027	tarbp2	95	87.195	Hippocampus_comes
ENSACLG00000018569	tarbp2	96	82.530	ENSIPUG00000023701	tarbp2	95	81.982	Ictalurus_punctatus
ENSACLG00000018569	tarbp2	95	67.049	ENSSTOG00000003678	TARBP2	100	66.393	Ictidomys_tridecemlineatus
ENSACLG00000018569	tarbp2	98	89.971	ENSKMAG00000012142	tarbp2	98	89.971	Kryptolebias_marmoratus
ENSACLG00000018569	tarbp2	95	90.801	ENSLBEG00000015027	tarbp2	97	89.244	Labrus_bergylta
ENSACLG00000018569	tarbp2	74	91.228	ENSLACG00000007087	TARBP2	76	91.228	Latimeria_chalumnae
ENSACLG00000018569	tarbp2	95	80.665	ENSLOCG00000005711	tarbp2	95	80.480	Lepisosteus_oculatus
ENSACLG00000018569	tarbp2	71	62.782	ENSLAFG00000002620	TARBP2	93	61.832	Loxodonta_africana
ENSACLG00000018569	tarbp2	95	66.476	ENSMFAG00000013567	TARBP2	72	92.982	Macaca_fascicularis
ENSACLG00000018569	tarbp2	95	66.762	ENSMMUG00000018492	TARBP2	95	66.189	Macaca_mulatta
ENSACLG00000018569	tarbp2	95	66.476	ENSMNEG00000036477	TARBP2	72	92.982	Macaca_nemestrina
ENSACLG00000018569	tarbp2	95	67.372	ENSMLEG00000029583	TARBP2	72	92.982	Mandrillus_leucophaeus
ENSACLG00000018569	tarbp2	95	90.520	ENSMAMG00000010272	tarbp2	97	88.012	Mastacembelus_armatus
ENSACLG00000018569	tarbp2	97	97.910	ENSMZEG00005006895	tarbp2	97	97.910	Maylandia_zebra
ENSACLG00000018569	tarbp2	95	66.379	ENSMAUG00000019805	Tarbp2	95	65.230	Mesocricetus_auratus
ENSACLG00000018569	tarbp2	94	67.826	ENSMICG00000027441	TARBP2	100	67.246	Microcebus_murinus
ENSACLG00000018569	tarbp2	95	67.241	ENSMOCG00000003691	Tarbp2	95	65.805	Microtus_ochrogaster
ENSACLG00000018569	tarbp2	94	87.879	ENSMMOG00000010374	tarbp2	100	87.879	Mola_mola
ENSACLG00000018569	tarbp2	97	91.343	ENSMALG00000009773	tarbp2	97	91.343	Monopterus_albus
ENSACLG00000018569	tarbp2	95	66.379	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSACLG00000018569	tarbp2	95	66.379	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSACLG00000018569	tarbp2	95	66.092	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSACLG00000018569	tarbp2	95	66.379	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSACLG00000018569	tarbp2	95	67.529	ENSMPUG00000005944	TARBP2	95	66.379	Mustela_putorius_furo
ENSACLG00000018569	tarbp2	95	67.908	ENSMLUG00000010035	TARBP2	95	67.714	Myotis_lucifugus
ENSACLG00000018569	tarbp2	95	66.189	ENSNLEG00000017690	TARBP2	72	92.982	Nomascus_leucogenys
ENSACLG00000018569	tarbp2	95	70.732	ENSMEUG00000001916	TARBP2	95	70.732	Notamacropus_eugenii
ENSACLG00000018569	tarbp2	63	70.588	ENSOPRG00000011397	TARBP2	98	70.588	Ochotona_princeps
ENSACLG00000018569	tarbp2	60	68.142	ENSODEG00000013413	TARBP2	100	67.699	Octodon_degus
ENSACLG00000018569	tarbp2	95	93.391	ENSONIG00000005115	tarbp2	96	93.391	Oreochromis_niloticus
ENSACLG00000018569	tarbp2	95	69.054	ENSOCUG00000005700	TARBP2	95	68.481	Oryctolagus_cuniculus
ENSACLG00000018569	tarbp2	97	89.254	ENSORLG00000005209	tarbp2	97	89.254	Oryzias_latipes
ENSACLG00000018569	tarbp2	97	88.955	ENSORLG00020017755	tarbp2	97	88.955	Oryzias_latipes_hni
ENSACLG00000018569	tarbp2	97	89.254	ENSORLG00015013237	tarbp2	97	89.254	Oryzias_latipes_hsok
ENSACLG00000018569	tarbp2	97	88.955	ENSOMEG00000018860	tarbp2	97	88.955	Oryzias_melastigma
ENSACLG00000018569	tarbp2	95	66.761	ENSOGAG00000001744	TARBP2	95	67.045	Otolemur_garnettii
ENSACLG00000018569	tarbp2	95	66.762	ENSOARG00000016437	TARBP2	95	66.476	Ovis_aries
ENSACLG00000018569	tarbp2	95	66.189	ENSPPAG00000030429	TARBP2	72	92.982	Pan_paniscus
ENSACLG00000018569	tarbp2	95	67.335	ENSPPRG00000000189	TARBP2	95	66.476	Panthera_pardus
ENSACLG00000018569	tarbp2	95	69.208	ENSPTIG00000007859	TARBP2	95	68.805	Panthera_tigris_altaica
ENSACLG00000018569	tarbp2	95	66.189	ENSPTRG00000005020	TARBP2	72	92.982	Pan_troglodytes
ENSACLG00000018569	tarbp2	95	66.476	ENSPANG00000010689	TARBP2	72	92.982	Papio_anubis
ENSACLG00000018569	tarbp2	95	78.338	ENSPKIG00000002455	tarbp2	95	78.852	Paramormyrops_kingsleyae
ENSACLG00000018569	tarbp2	97	88.358	ENSPMGG00000006497	tarbp2	97	88.358	Periophthalmus_magnuspinnatus
ENSACLG00000018569	tarbp2	95	65.805	ENSPEMG00000014285	Tarbp2	95	64.655	Peromyscus_maniculatus_bairdii
ENSACLG00000018569	tarbp2	92	61.250	ENSPMAG00000000105	tarbp2	99	61.250	Petromyzon_marinus
ENSACLG00000018569	tarbp2	95	70.732	ENSPCIG00000006672	TARBP2	88	70.732	Phascolarctos_cinereus
ENSACLG00000018569	tarbp2	97	89.254	ENSPFOG00000007586	tarbp2	97	89.254	Poecilia_formosa
ENSACLG00000018569	tarbp2	97	88.657	ENSPLAG00000017659	tarbp2	97	88.657	Poecilia_latipinna
ENSACLG00000018569	tarbp2	97	89.254	ENSPMEG00000007775	tarbp2	97	89.254	Poecilia_mexicana
ENSACLG00000018569	tarbp2	97	88.657	ENSPREG00000007815	tarbp2	97	88.657	Poecilia_reticulata
ENSACLG00000018569	tarbp2	95	66.465	ENSPPYG00000004583	TARBP2	95	66.970	Pongo_abelii
ENSACLG00000018569	tarbp2	78	62.199	ENSPCAG00000005352	TARBP2	60	70.588	Procavia_capensis
ENSACLG00000018569	tarbp2	95	67.049	ENSPCOG00000013102	TARBP2	72	92.982	Propithecus_coquereli
ENSACLG00000018569	tarbp2	95	66.762	ENSPVAG00000012286	TARBP2	95	65.616	Pteropus_vampyrus
ENSACLG00000018569	tarbp2	97	97.612	ENSPNYG00000014125	tarbp2	97	97.612	Pundamilia_nyererei
ENSACLG00000018569	tarbp2	97	83.036	ENSPNAG00000011128	tarbp2	97	83.333	Pygocentrus_nattereri
ENSACLG00000018569	tarbp2	95	66.092	ENSRNOG00000042355	Tarbp2	95	66.092	Rattus_norvegicus
ENSACLG00000018569	tarbp2	95	66.476	ENSRBIG00000027150	TARBP2	72	92.982	Rhinopithecus_bieti
ENSACLG00000018569	tarbp2	95	66.476	ENSRROG00000044783	TARBP2	100	65.507	Rhinopithecus_roxellana
ENSACLG00000018569	tarbp2	95	66.476	ENSSBOG00000027305	TARBP2	72	92.982	Saimiri_boliviensis_boliviensis
ENSACLG00000018569	tarbp2	94	70.679	ENSSHAG00000007064	TARBP2	100	70.679	Sarcophilus_harrisii
ENSACLG00000018569	tarbp2	97	78.510	ENSSFOG00015010784	tarbp2	97	78.161	Scleropages_formosus
ENSACLG00000018569	tarbp2	97	89.736	ENSSMAG00000012769	tarbp2	97	89.736	Scophthalmus_maximus
ENSACLG00000018569	tarbp2	97	93.433	ENSSDUG00000018818	tarbp2	97	93.433	Seriola_dumerili
ENSACLG00000018569	tarbp2	95	95.122	ENSSLDG00000001835	tarbp2	95	95.122	Seriola_lalandi_dorsalis
ENSACLG00000018569	tarbp2	71	77.778	ENSSARG00000001010	TARBP2	67	82.927	Sorex_araneus
ENSACLG00000018569	tarbp2	63	89.474	ENSSPUG00000005895	TARBP2	67	88.136	Sphenodon_punctatus
ENSACLG00000018569	tarbp2	97	93.134	ENSSPAG00000022797	tarbp2	97	93.134	Stegastes_partitus
ENSACLG00000018569	tarbp2	95	66.572	ENSSSCG00000000276	TARBP2	100	66.087	Sus_scrofa
ENSACLG00000018569	tarbp2	71	56.202	ENSTGUG00000017031	TARBP2	100	55.814	Taeniopygia_guttata
ENSACLG00000018569	tarbp2	97	88.955	ENSTRUG00000014379	tarbp2	97	88.955	Takifugu_rubripes
ENSACLG00000018569	tarbp2	97	88.358	ENSTNIG00000007065	tarbp2	97	88.358	Tetraodon_nigroviridis
ENSACLG00000018569	tarbp2	95	67.049	ENSTTRG00000017177	TARBP2	95	66.476	Tursiops_truncatus
ENSACLG00000018569	tarbp2	95	66.762	ENSUAMG00000009011	TARBP2	95	66.476	Ursus_americanus
ENSACLG00000018569	tarbp2	94	66.474	ENSUMAG00000010461	TARBP2	95	66.185	Ursus_maritimus
ENSACLG00000018569	tarbp2	95	66.189	ENSVVUG00000028150	TARBP2	100	65.507	Vulpes_vulpes
ENSACLG00000018569	tarbp2	95	69.322	ENSXETG00000012644	tarbp2	95	69.027	Xenopus_tropicalis
ENSACLG00000018569	tarbp2	97	89.552	ENSXMAG00000017836	tarbp2	97	89.552	Xiphophorus_maculatus