EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000018673 (Gene tree)
Gene ID: 113014769
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 23007 bases
Position: chr22:34732666-34755672
Accession: 113014769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000027488	tRNA-synt_1g	PF09334.11	2.9e-14	1	1
ENSACLP00000027488	Anticodon_1	PF08264.13	1e-35	1	1
ENSACLP00000027488	tRNA-synt_1	PF00133.22	3.2e-194	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000028133	-	6971	-	ENSACLP00000027488	1073 (aa)	XP_026012285	UPI000E40AF44

Gene Model

Click here to download ENSACLG00000018673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000018673	vars2	93	49.111	ENSACLG00000025699	vars	79	47.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018673	vars2	100	79.040	ENSAPOG00000007396	vars2	100	79.224	Acanthochromis_polyacanthus
ENSACLG00000018673	vars2	97	51.261	ENSAMEG00000012997	VARS2	95	51.261	Ailuropoda_melanoleuca
ENSACLG00000018673	vars2	100	85.568	ENSACIG00000004344	vars2	99	85.568	Amphilophus_citrinellus
ENSACLG00000018673	vars2	100	79.409	ENSAOCG00000000476	vars2	100	79.594	Amphiprion_ocellaris
ENSACLG00000018673	vars2	100	79.040	ENSAPEG00000008646	vars2	97	79.224	Amphiprion_percula
ENSACLG00000018673	vars2	99	80.787	ENSATEG00000012291	vars2	99	80.787	Anabas_testudineus
ENSACLG00000018673	vars2	97	52.281	ENSACAG00000022093	VARS2	95	52.281	Anolis_carolinensis
ENSACLG00000018673	vars2	99	49.860	ENSANAG00000038018	VARS2	97	49.860	Aotus_nancymaae
ENSACLG00000018673	vars2	97	71.073	ENSAMXG00000017773	vars2	96	72.105	Astyanax_mexicanus
ENSACLG00000018673	vars2	99	50.652	ENSBTAG00000010698	VARS2	98	50.652	Bos_taurus
ENSACLG00000018673	vars2	99	49.673	ENSCJAG00000019826	VARS2	97	49.766	Callithrix_jacchus
ENSACLG00000018673	vars2	99	51.113	ENSCAFG00000000454	VARS2	98	51.113	Canis_familiaris
ENSACLG00000018673	vars2	86	55.914	ENSCAFG00020019387	VARS2	93	55.901	Canis_lupus_dingo
ENSACLG00000018673	vars2	99	50.604	ENSCHIG00000007847	VARS2	98	50.979	Capra_hircus
ENSACLG00000018673	vars2	98	51.344	ENSTSYG00000009904	VARS2	99	51.344	Carlito_syrichta
ENSACLG00000018673	vars2	89	52.510	ENSCAPG00000017770	VARS2	99	52.615	Cavia_aperea
ENSACLG00000018673	vars2	99	51.117	ENSCPOG00000021834	VARS2	98	51.117	Cavia_porcellus
ENSACLG00000018673	vars2	99	49.673	ENSCCAG00000037907	VARS2	97	49.673	Cebus_capucinus
ENSACLG00000018673	vars2	98	50.140	ENSCATG00000032554	VARS2	98	50.233	Cercocebus_atys
ENSACLG00000018673	vars2	98	51.256	ENSCLAG00000002889	VARS2	99	51.256	Chinchilla_lanigera
ENSACLG00000018673	vars2	98	50.420	ENSCSAG00000008327	VARS2	98	50.514	Chlorocebus_sabaeus
ENSACLG00000018673	vars2	92	55.859	ENSCPBG00000021502	VARS2	96	55.859	Chrysemys_picta_bellii
ENSACLG00000018673	vars2	98	49.953	ENSCANG00000014991	VARS2	97	50.047	Colobus_angolensis_palliatus
ENSACLG00000018673	vars2	99	51.258	ENSCGRG00001021535	Vars2	98	51.210	Cricetulus_griseus_chok1gshd
ENSACLG00000018673	vars2	99	51.258	ENSCGRG00000014112	Vars2	98	51.210	Cricetulus_griseus_crigri
ENSACLG00000018673	vars2	88	77.605	ENSCSEG00000015432	vars2	98	77.605	Cynoglossus_semilaevis
ENSACLG00000018673	vars2	66	79.014	ENSCVAG00000017765	vars2	98	79.014	Cyprinodon_variegatus
ENSACLG00000018673	vars2	99	70.349	ENSDARG00000056717	vars2	98	70.349	Danio_rerio
ENSACLG00000018673	vars2	81	49.829	ENSDORG00000008516	Vars2	93	49.829	Dipodomys_ordii
ENSACLG00000018673	vars2	99	44.786	ENSETEG00000014844	VARS2	98	44.786	Echinops_telfairi
ENSACLG00000018673	vars2	98	50.743	ENSEASG00005019997	VARS2	95	54.748	Equus_asinus_asinus
ENSACLG00000018673	vars2	98	50.929	ENSECAG00000018202	VARS2	99	51.022	Equus_caballus
ENSACLG00000018673	vars2	63	57.843	ENSEEUG00000012591	-	61	57.843	Erinaceus_europaeus
ENSACLG00000018673	vars2	99	71.297	ENSELUG00000017824	vars2	99	71.297	Esox_lucius
ENSACLG00000018673	vars2	99	50.371	ENSFCAG00000010531	VARS2	98	50.371	Felis_catus
ENSACLG00000018673	vars2	99	50.279	ENSFDAG00000017216	VARS2	98	50.279	Fukomys_damarensis
ENSACLG00000018673	vars2	93	72.736	ENSFHEG00000013932	vars2	98	72.736	Fundulus_heteroclitus
ENSACLG00000018673	vars2	91	70.991	ENSGMOG00000018960	vars2	99	70.991	Gadus_morhua
ENSACLG00000018673	vars2	93	74.545	ENSGAFG00000004737	vars2	100	74.545	Gambusia_affinis
ENSACLG00000018673	vars2	94	77.098	ENSGACG00000001464	vars2	100	77.098	Gasterosteus_aculeatus
ENSACLG00000018673	vars2	93	55.355	ENSGAGG00000011652	VARS2	98	55.355	Gopherus_agassizii
ENSACLG00000018673	vars2	96	50.620	ENSGGOG00000014587	VARS2	96	50.862	Gorilla_gorilla
ENSACLG00000018673	vars2	99	94.013	ENSHBUG00000002448	vars2	100	94.013	Haplochromis_burtoni
ENSACLG00000018673	vars2	99	51.165	ENSHGLG00000012886	VARS2	94	51.258	Heterocephalus_glaber_female
ENSACLG00000018673	vars2	99	51.072	ENSHGLG00100016535	VARS2	98	51.165	Heterocephalus_glaber_male
ENSACLG00000018673	vars2	69	76.119	ENSHCOG00000017907	vars2	97	76.119	Hippocampus_comes
ENSACLG00000018673	vars2	95	71.637	ENSIPUG00000015573	Vars2	99	69.557	Ictalurus_punctatus
ENSACLG00000018673	vars2	99	49.442	ENSSTOG00000009924	VARS2	98	49.535	Ictidomys_tridecemlineatus
ENSACLG00000018673	vars2	97	51.341	ENSJJAG00000011144	Vars2	95	51.437	Jaculus_jaculus
ENSACLG00000018673	vars2	99	76.519	ENSKMAG00000001393	vars2	99	76.519	Kryptolebias_marmoratus
ENSACLG00000018673	vars2	99	73.155	ENSLBEG00000011949	vars2	99	73.155	Labrus_bergylta
ENSACLG00000018673	vars2	51	81.736	ENSLBEG00000005480	-	81	81.522	Labrus_bergylta
ENSACLG00000018673	vars2	97	50.803	ENSLACG00000001576	-	99	50.803	Latimeria_chalumnae
ENSACLG00000018673	vars2	99	50.652	ENSLAFG00000015183	VARS2	98	50.652	Loxodonta_africana
ENSACLG00000018673	vars2	98	50.233	ENSMFAG00000042367	VARS2	98	50.327	Macaca_fascicularis
ENSACLG00000018673	vars2	98	50.327	ENSMMUG00000018609	VARS2	98	50.420	Macaca_mulatta
ENSACLG00000018673	vars2	98	50.327	ENSMNEG00000043163	VARS2	98	50.420	Macaca_nemestrina
ENSACLG00000018673	vars2	95	51.054	ENSMLEG00000041728	VARS2	93	51.149	Mandrillus_leucophaeus
ENSACLG00000018673	vars2	97	79.460	ENSMAMG00000020339	vars2	99	78.163	Mastacembelus_armatus
ENSACLG00000018673	vars2	100	99.907	ENSMZEG00005017669	vars2	100	99.907	Maylandia_zebra
ENSACLG00000018673	vars2	99	51.501	ENSMAUG00000018946	Vars2	97	51.501	Mesocricetus_auratus
ENSACLG00000018673	vars2	83	55.184	ENSMICG00000005365	VARS2	99	55.184	Microcebus_murinus
ENSACLG00000018673	vars2	92	57.617	ENSMOCG00000014607	Vars2	98	57.617	Microtus_ochrogaster
ENSACLG00000018673	vars2	95	76.961	ENSMMOG00000012122	vars2	100	74.954	Mola_mola
ENSACLG00000018673	vars2	94	50.437	ENSMODG00000015848	VARS2	96	49.393	Monodelphis_domestica
ENSACLG00000018673	vars2	96	77.854	ENSMALG00000009217	vars2	99	78.578	Monopterus_albus
ENSACLG00000018673	vars2	99	50.743	MGP_CAROLIEiJ_G0021529	Vars2	97	54.231	Mus_caroli
ENSACLG00000018673	vars2	99	50.745	ENSMUSG00000038838	Vars2	96	54.340	Mus_musculus
ENSACLG00000018673	vars2	98	51.210	MGP_PahariEiJ_G0020523	Vars2	96	54.688	Mus_pahari
ENSACLG00000018673	vars2	99	51.024	MGP_SPRETEiJ_G0022436	Vars2	97	53.541	Mus_spretus
ENSACLG00000018673	vars2	98	52.194	ENSMPUG00000011643	VARS2	98	52.194	Mustela_putorius_furo
ENSACLG00000018673	vars2	95	51.841	ENSMLUG00000002356	VARS2	91	51.841	Myotis_lucifugus
ENSACLG00000018673	vars2	99	47.516	ENSNGAG00000020607	Vars2	97	47.516	Nannospalax_galili
ENSACLG00000018673	vars2	67	92.857	ENSNBRG00000001624	vars2	63	92.857	Neolamprologus_brichardi
ENSACLG00000018673	vars2	96	50.000	ENSNLEG00000005625	VARS2	93	50.242	Nomascus_leucogenys
ENSACLG00000018673	vars2	77	57.333	ENSMEUG00000014475	VARS2	88	57.333	Notamacropus_eugenii
ENSACLG00000018673	vars2	90	50.698	ENSOPRG00000000682	VARS2	88	50.698	Ochotona_princeps
ENSACLG00000018673	vars2	99	50.984	ENSODEG00000017965	VARS2	97	51.078	Octodon_degus
ENSACLG00000018673	vars2	94	71.415	ENSONIG00000004734	vars2	100	71.415	Oreochromis_niloticus
ENSACLG00000018673	vars2	72	43.830	ENSOANG00000000398	-	91	43.830	Ornithorhynchus_anatinus
ENSACLG00000018673	vars2	99	47.417	ENSOCUG00000021496	VARS2	63	47.970	Oryctolagus_cuniculus
ENSACLG00000018673	vars2	99	72.560	ENSORLG00000010632	vars2	99	72.560	Oryzias_latipes
ENSACLG00000018673	vars2	95	74.732	ENSORLG00020018584	vars2	99	72.652	Oryzias_latipes_hni
ENSACLG00000018673	vars2	99	72.744	ENSORLG00015010408	vars2	99	72.744	Oryzias_latipes_hsok
ENSACLG00000018673	vars2	96	74.805	ENSOMEG00000008360	vars2	99	72.719	Oryzias_melastigma
ENSACLG00000018673	vars2	95	51.385	ENSOGAG00000006087	VARS2	93	51.385	Otolemur_garnettii
ENSACLG00000018673	vars2	99	50.000	ENSOARG00000010844	VARS2	97	50.372	Ovis_aries
ENSACLG00000018673	vars2	98	50.140	ENSPPAG00000041141	VARS2	98	50.140	Pan_paniscus
ENSACLG00000018673	vars2	98	50.607	ENSPPRG00000006751	VARS2	96	50.607	Panthera_pardus
ENSACLG00000018673	vars2	97	50.561	ENSPTIG00000017799	VARS2	96	52.438	Panthera_tigris_altaica
ENSACLG00000018673	vars2	98	50.140	ENSPTRG00000034497	VARS2	98	50.140	Pan_troglodytes
ENSACLG00000018673	vars2	98	50.327	ENSPANG00000018481	VARS2	97	51.607	Papio_anubis
ENSACLG00000018673	vars2	97	69.866	ENSPKIG00000011372	vars2	97	69.347	Paramormyrops_kingsleyae
ENSACLG00000018673	vars2	59	63.365	ENSPSIG00000006206	VARS2	92	63.101	Pelodiscus_sinensis
ENSACLG00000018673	vars2	99	72.305	ENSPMGG00000000465	vars2	99	72.305	Periophthalmus_magnuspinnatus
ENSACLG00000018673	vars2	99	50.792	ENSPEMG00000014691	Vars2	98	50.792	Peromyscus_maniculatus_bairdii
ENSACLG00000018673	vars2	96	51.098	ENSPCIG00000015040	VARS2	97	50.708	Phascolarctos_cinereus
ENSACLG00000018673	vars2	98	73.934	ENSPFOG00000017616	vars2	97	73.934	Poecilia_formosa
ENSACLG00000018673	vars2	99	74.115	ENSPLAG00000019778	vars2	99	74.115	Poecilia_latipinna
ENSACLG00000018673	vars2	99	73.655	ENSPMEG00000011123	vars2	99	73.655	Poecilia_mexicana
ENSACLG00000018673	vars2	97	66.254	ENSPREG00000014998	vars2	99	66.254	Poecilia_reticulata
ENSACLG00000018673	vars2	99	50.000	ENSPPYG00000016424	VARS2	97	50.094	Pongo_abelii
ENSACLG00000018673	vars2	63	54.833	ENSPCAG00000006946	VARS2	78	54.833	Procavia_capensis
ENSACLG00000018673	vars2	99	49.675	ENSPCOG00000014839	VARS2	95	49.675	Propithecus_coquereli
ENSACLG00000018673	vars2	97	51.149	ENSPVAG00000004197	VARS2	95	51.149	Pteropus_vampyrus
ENSACLG00000018673	vars2	87	96.496	ENSPNYG00000010314	vars2	100	96.496	Pundamilia_nyererei
ENSACLG00000018673	vars2	99	68.710	ENSPNAG00000026793	vars2	100	68.984	Pygocentrus_nattereri
ENSACLG00000018673	vars2	99	50.466	ENSRNOG00000000833	Vars2	98	50.466	Rattus_norvegicus
ENSACLG00000018673	vars2	98	50.233	ENSRBIG00000032725	VARS2	98	50.327	Rhinopithecus_bieti
ENSACLG00000018673	vars2	98	50.140	ENSRROG00000043847	VARS2	98	50.233	Rhinopithecus_roxellana
ENSACLG00000018673	vars2	99	48.989	ENSSBOG00000033240	VARS2	95	48.989	Saimiri_boliviensis_boliviensis
ENSACLG00000018673	vars2	99	50.372	ENSSHAG00000009307	VARS2	98	50.372	Sarcophilus_harrisii
ENSACLG00000018673	vars2	98	68.780	ENSSFOG00015016187	vars2	98	68.161	Scleropages_formosus
ENSACLG00000018673	vars2	100	77.819	ENSSMAG00000020842	vars2	99	77.911	Scophthalmus_maximus
ENSACLG00000018673	vars2	100	81.198	ENSSDUG00000011598	vars2	100	81.382	Seriola_dumerili
ENSACLG00000018673	vars2	100	78.125	ENSSLDG00000015492	vars2	100	78.401	Seriola_lalandi_dorsalis
ENSACLG00000018673	vars2	79	59.672	ENSSPUG00000014700	VARS2	87	59.672	Sphenodon_punctatus
ENSACLG00000018673	vars2	99	76.204	ENSSPAG00000004654	vars2	99	76.204	Stegastes_partitus
ENSACLG00000018673	vars2	97	51.643	ENSSSCG00000001384	VARS2	97	53.374	Sus_scrofa
ENSACLG00000018673	vars2	99	71.788	ENSTRUG00000005264	vars2	99	72.117	Takifugu_rubripes
ENSACLG00000018673	vars2	97	71.950	ENSTNIG00000005916	vars2	97	71.226	Tetraodon_nigroviridis
ENSACLG00000018673	vars2	91	49.528	ENSTTRG00000012243	VARS2	91	49.528	Tursiops_truncatus
ENSACLG00000018673	vars2	99	51.022	ENSUAMG00000026124	VARS2	99	52.910	Ursus_americanus
ENSACLG00000018673	vars2	99	51.163	ENSUMAG00000019894	VARS2	98	51.163	Ursus_maritimus
ENSACLG00000018673	vars2	99	51.020	ENSVVUG00000010754	VARS2	93	51.020	Vulpes_vulpes
ENSACLG00000018673	vars2	89	52.583	ENSXETG00000003036	vars2	98	52.583	Xenopus_tropicalis
ENSACLG00000018673	vars2	97	75.024	ENSXCOG00000003455	vars2	99	75.024	Xiphophorus_couchianus
ENSACLG00000018673	vars2	99	75.510	ENSXMAG00000013523	vars2	99	75.510	Xiphophorus_maculatus