EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000018711 (Gene tree)
Gene ID: 113009660
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 13258 bases
Position: chr17:3431194-3444451
Accession: 113009660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000027675	ResIII	PF04851.15	8.7e-10	1	1
ENSACLP00000027604	ResIII	PF04851.15	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000028322	-	2160	-	ENSACLP00000027675	719 (aa)	-	-
ENSACLT00000028251	-	4883	-	ENSACLP00000027604	739 (aa)	XP_026003897	UPI000E410184

Gene Model

Click here to download ENSACLG00000018711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000018711	rad54l	86	45.659	ENSACLG00000007826	rad54b	70	46.290
ENSACLG00000018711	rad54l	71	30.709	ENSACLG00000019304	chd1l	50	31.062

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018711	rad54l	99	77.346	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSACLG00000018711	rad54l	99	86.259	ENSAPOG00000011643	rad54l	99	86.259	Acanthochromis_polyacanthus
ENSACLG00000018711	rad54l	99	76.510	ENSAMEG00000013902	RAD54L	99	76.510	Ailuropoda_melanoleuca
ENSACLG00000018711	rad54l	99	91.057	ENSACIG00000001939	rad54l	99	91.057	Amphilophus_citrinellus
ENSACLG00000018711	rad54l	99	89.402	ENSAOCG00000017576	rad54l	99	89.402	Amphiprion_ocellaris
ENSACLG00000018711	rad54l	96	89.311	ENSAPEG00000020658	rad54l	98	89.311	Amphiprion_percula
ENSACLG00000018711	rad54l	95	89.886	ENSATEG00000006767	rad54l	100	89.886	Anabas_testudineus
ENSACLG00000018711	rad54l	97	80.259	ENSAPLG00000006389	RAD54L	99	81.688	Anas_platyrhynchos
ENSACLG00000018711	rad54l	99	80.350	ENSACAG00000002312	RAD54L	99	80.350	Anolis_carolinensis
ENSACLG00000018711	rad54l	99	77.047	ENSANAG00000035439	RAD54L	99	77.078	Aotus_nancymaae
ENSACLG00000018711	rad54l	100	83.962	ENSAMXG00000012777	rad54l	100	83.962	Astyanax_mexicanus
ENSACLG00000018711	rad54l	99	76.841	ENSBTAG00000019901	RAD54L	99	76.841	Bos_taurus
ENSACLG00000018711	rad54l	99	56.685	WBGene00004298	rad-54	87	57.843	Caenorhabditis_elegans
ENSACLG00000018711	rad54l	97	77.191	ENSCJAG00000021080	RAD54L	91	77.191	Callithrix_jacchus
ENSACLG00000018711	rad54l	99	76.944	ENSCAFG00000004272	RAD54L	99	76.944	Canis_familiaris
ENSACLG00000018711	rad54l	99	76.913	ENSCAFG00020015066	RAD54L	99	76.913	Canis_lupus_dingo
ENSACLG00000018711	rad54l	99	76.676	ENSCHIG00000020118	RAD54L	99	76.676	Capra_hircus
ENSACLG00000018711	rad54l	99	76.439	ENSTSYG00000002032	RAD54L	99	76.439	Carlito_syrichta
ENSACLG00000018711	rad54l	99	77.346	ENSCPOG00000006768	RAD54L	99	77.346	Cavia_porcellus
ENSACLG00000018711	rad54l	99	77.480	ENSCCAG00000025783	RAD54L	99	77.480	Cebus_capucinus
ENSACLG00000018711	rad54l	99	76.944	ENSCATG00000030589	RAD54L	99	76.944	Cercocebus_atys
ENSACLG00000018711	rad54l	99	77.346	ENSCLAG00000004645	RAD54L	99	77.346	Chinchilla_lanigera
ENSACLG00000018711	rad54l	99	77.078	ENSCSAG00000001229	RAD54L	99	77.078	Chlorocebus_sabaeus
ENSACLG00000018711	rad54l	99	79.812	ENSCPBG00000005675	RAD54L	99	79.812	Chrysemys_picta_bellii
ENSACLG00000018711	rad54l	99	62.516	ENSCING00000024456	-	99	62.387	Ciona_intestinalis
ENSACLG00000018711	rad54l	100	62.092	ENSCSAVG00000010859	-	100	62.222	Ciona_savignyi
ENSACLG00000018711	rad54l	99	76.810	ENSCANG00000034891	RAD54L	99	76.810	Colobus_angolensis_palliatus
ENSACLG00000018711	rad54l	99	76.644	ENSCGRG00001014807	Rad54l	99	76.644	Cricetulus_griseus_chok1gshd
ENSACLG00000018711	rad54l	99	76.644	ENSCGRG00000016038	Rad54l	99	76.644	Cricetulus_griseus_crigri
ENSACLG00000018711	rad54l	99	85.597	ENSCSEG00000001983	rad54l	99	85.597	Cynoglossus_semilaevis
ENSACLG00000018711	rad54l	83	84.211	ENSCVAG00000019561	rad54l	100	84.211	Cyprinodon_variegatus
ENSACLG00000018711	rad54l	100	82.815	ENSDARG00000018623	rad54l	100	82.815	Danio_rerio
ENSACLG00000018711	rad54l	99	76.408	ENSDNOG00000003395	RAD54L	99	76.408	Dasypus_novemcinctus
ENSACLG00000018711	rad54l	99	70.241	ENSDORG00000002632	Rad54l	99	70.241	Dipodomys_ordii
ENSACLG00000018711	rad54l	99	54.606	FBgn0002989	okr	95	54.606	Drosophila_melanogaster
ENSACLG00000018711	rad54l	78	76.035	ENSETEG00000000550	RAD54L	78	76.035	Echinops_telfairi
ENSACLG00000018711	rad54l	99	76.644	ENSEASG00005004511	RAD54L	98	78.540	Equus_asinus_asinus
ENSACLG00000018711	rad54l	99	77.311	ENSECAG00000008760	RAD54L	99	77.591	Equus_caballus
ENSACLG00000018711	rad54l	99	73.995	ENSEEUG00000008113	RAD54L	99	73.995	Erinaceus_europaeus
ENSACLG00000018711	rad54l	100	84.987	ENSELUG00000002295	rad54l	100	84.987	Esox_lucius
ENSACLG00000018711	rad54l	99	76.139	ENSFCAG00000003444	RAD54L	99	76.139	Felis_catus
ENSACLG00000018711	rad54l	99	79.408	ENSFALG00000009480	RAD54L	99	79.812	Ficedula_albicollis
ENSACLG00000018711	rad54l	99	77.078	ENSFDAG00000007806	RAD54L	99	77.078	Fukomys_damarensis
ENSACLG00000018711	rad54l	63	81.897	ENSFHEG00000009824	rad54l	80	81.897	Fundulus_heteroclitus
ENSACLG00000018711	rad54l	99	83.491	ENSGMOG00000014568	rad54l	100	83.491	Gadus_morhua
ENSACLG00000018711	rad54l	99	79.082	ENSGALG00000010356	RAD54L	92	79.082	Gallus_gallus
ENSACLG00000018711	rad54l	91	84.866	ENSGAFG00000011110	rad54l	100	84.866	Gambusia_affinis
ENSACLG00000018711	rad54l	100	87.314	ENSGACG00000003111	rad54l	98	87.314	Gasterosteus_aculeatus
ENSACLG00000018711	rad54l	99	79.111	ENSGAGG00000014089	RAD54L	96	79.111	Gopherus_agassizii
ENSACLG00000018711	rad54l	99	76.944	ENSGGOG00000010602	RAD54L	99	76.944	Gorilla_gorilla
ENSACLG00000018711	rad54l	100	99.729	ENSHBUG00000007793	rad54l	100	99.729	Haplochromis_burtoni
ENSACLG00000018711	rad54l	99	77.078	ENSHGLG00000000753	RAD54L	99	77.078	Heterocephalus_glaber_female
ENSACLG00000018711	rad54l	99	76.676	ENSHGLG00100016987	RAD54L	99	76.676	Heterocephalus_glaber_male
ENSACLG00000018711	rad54l	100	81.965	ENSIPUG00000015999	rad54l	100	84.792	Ictalurus_punctatus
ENSACLG00000018711	rad54l	99	76.738	ENSSTOG00000029125	RAD54L	99	76.738	Ictidomys_tridecemlineatus
ENSACLG00000018711	rad54l	99	63.673	ENSJJAG00000000235	-	99	63.539	Jaculus_jaculus
ENSACLG00000018711	rad54l	100	86.351	ENSKMAG00000009944	rad54l	100	86.351	Kryptolebias_marmoratus
ENSACLG00000018711	rad54l	99	88.179	ENSLBEG00000014617	rad54l	97	90.313	Labrus_bergylta
ENSACLG00000018711	rad54l	100	83.176	ENSLOCG00000004144	rad54l	100	84.398	Lepisosteus_oculatus
ENSACLG00000018711	rad54l	99	76.242	ENSLAFG00000007583	RAD54L	99	76.644	Loxodonta_africana
ENSACLG00000018711	rad54l	99	76.810	ENSMFAG00000031241	RAD54L	99	76.810	Macaca_fascicularis
ENSACLG00000018711	rad54l	99	76.810	ENSMMUG00000011568	RAD54L	99	76.810	Macaca_mulatta
ENSACLG00000018711	rad54l	99	76.810	ENSMNEG00000038562	RAD54L	99	76.810	Macaca_nemestrina
ENSACLG00000018711	rad54l	99	76.944	ENSMLEG00000038145	RAD54L	99	76.944	Mandrillus_leucophaeus
ENSACLG00000018711	rad54l	99	86.024	ENSMAMG00000022180	rad54l	99	88.166	Mastacembelus_armatus
ENSACLG00000018711	rad54l	100	99.865	ENSMZEG00005018081	rad54l	100	99.865	Maylandia_zebra
ENSACLG00000018711	rad54l	99	79.324	ENSMGAG00000010634	RAD54L	99	79.324	Meleagris_gallopavo
ENSACLG00000018711	rad54l	99	76.882	ENSMAUG00000020076	Rad54l	99	76.882	Mesocricetus_auratus
ENSACLG00000018711	rad54l	99	77.078	ENSMICG00000003266	RAD54L	99	77.078	Microcebus_murinus
ENSACLG00000018711	rad54l	99	77.078	ENSMOCG00000001778	Rad54l	99	77.078	Microtus_ochrogaster
ENSACLG00000018711	rad54l	99	84.906	ENSMALG00000021148	rad54l	99	84.906	Monopterus_albus
ENSACLG00000018711	rad54l	99	72.621	MGP_CAROLIEiJ_G0026325	Rad54l	99	72.621	Mus_caroli
ENSACLG00000018711	rad54l	99	76.542	ENSMUSG00000028702	Rad54l	99	76.542	Mus_musculus
ENSACLG00000018711	rad54l	99	76.644	MGP_PahariEiJ_G0028657	Rad54l	99	76.644	Mus_pahari
ENSACLG00000018711	rad54l	99	76.676	MGP_SPRETEiJ_G0027297	Rad54l	99	76.676	Mus_spretus
ENSACLG00000018711	rad54l	99	76.542	ENSMPUG00000012883	RAD54L	99	76.542	Mustela_putorius_furo
ENSACLG00000018711	rad54l	99	77.242	ENSMLUG00000003763	RAD54L	99	77.242	Myotis_lucifugus
ENSACLG00000018711	rad54l	99	76.779	ENSNGAG00000024213	Rad54l	99	76.779	Nannospalax_galili
ENSACLG00000018711	rad54l	99	76.944	ENSNLEG00000016548	RAD54L	99	76.944	Nomascus_leucogenys
ENSACLG00000018711	rad54l	95	77.013	ENSMEUG00000006793	RAD54L	100	78.338	Notamacropus_eugenii
ENSACLG00000018711	rad54l	90	80.139	ENSOPRG00000016016	RAD54L	90	80.139	Ochotona_princeps
ENSACLG00000018711	rad54l	99	77.212	ENSODEG00000008519	RAD54L	99	77.212	Octodon_degus
ENSACLG00000018711	rad54l	100	99.188	ENSONIG00000007659	rad54l	100	99.188	Oreochromis_niloticus
ENSACLG00000018711	rad54l	99	76.975	ENSOCUG00000005229	RAD54L	99	76.975	Oryctolagus_cuniculus
ENSACLG00000018711	rad54l	100	82.544	ENSORLG00000002958	rad54l	100	82.297	Oryzias_latipes
ENSACLG00000018711	rad54l	99	82.544	ENSORLG00020006554	rad54l	99	85.588	Oryzias_latipes_hni
ENSACLG00000018711	rad54l	100	82.297	ENSORLG00015002907	rad54l	100	82.432	Oryzias_latipes_hsok
ENSACLG00000018711	rad54l	99	83.198	ENSOMEG00000007770	rad54l	99	83.198	Oryzias_melastigma
ENSACLG00000018711	rad54l	99	76.604	ENSOARG00000002264	RAD54L	99	76.604	Ovis_aries
ENSACLG00000018711	rad54l	99	77.078	ENSPPAG00000031222	RAD54L	99	77.078	Pan_paniscus
ENSACLG00000018711	rad54l	99	76.139	ENSPPRG00000010317	RAD54L	99	76.139	Panthera_pardus
ENSACLG00000018711	rad54l	99	76.139	ENSPTIG00000012200	RAD54L	99	76.139	Panthera_tigris_altaica
ENSACLG00000018711	rad54l	99	77.078	ENSPTRG00000000689	RAD54L	99	77.078	Pan_troglodytes
ENSACLG00000018711	rad54l	99	76.944	ENSPANG00000016295	RAD54L	99	76.944	Papio_anubis
ENSACLG00000018711	rad54l	99	77.341	ENSPKIG00000016172	rad54l	99	77.341	Paramormyrops_kingsleyae
ENSACLG00000018711	rad54l	99	79.564	ENSPSIG00000003258	RAD54L	99	79.564	Pelodiscus_sinensis
ENSACLG00000018711	rad54l	99	80.488	ENSPMGG00000016335	rad54l	99	80.488	Periophthalmus_magnuspinnatus
ENSACLG00000018711	rad54l	99	76.944	ENSPEMG00000011422	Rad54l	99	76.944	Peromyscus_maniculatus_bairdii
ENSACLG00000018711	rad54l	99	68.514	ENSPMAG00000007719	rad54l	99	68.514	Petromyzon_marinus
ENSACLG00000018711	rad54l	100	78.658	ENSPCIG00000029032	RAD54L	100	78.658	Phascolarctos_cinereus
ENSACLG00000018711	rad54l	86	86.950	ENSPFOG00000013732	rad54l	100	86.950	Poecilia_formosa
ENSACLG00000018711	rad54l	86	83.173	ENSPLAG00000023416	rad54l	99	84.903	Poecilia_latipinna
ENSACLG00000018711	rad54l	91	85.163	ENSPMEG00000008299	rad54l	100	85.163	Poecilia_mexicana
ENSACLG00000018711	rad54l	100	84.189	ENSPREG00000019955	rad54l	100	84.189	Poecilia_reticulata
ENSACLG00000018711	rad54l	99	64.793	ENSPPYG00000001398	RAD54L	99	64.793	Pongo_abelii
ENSACLG00000018711	rad54l	80	77.778	ENSPCAG00000005323	RAD54L	80	77.778	Procavia_capensis
ENSACLG00000018711	rad54l	99	76.542	ENSPCOG00000015423	RAD54L	99	76.542	Propithecus_coquereli
ENSACLG00000018711	rad54l	100	99.444	ENSPNYG00000002942	rad54l	100	99.444	Pundamilia_nyererei
ENSACLG00000018711	rad54l	100	83.671	ENSPNAG00000012483	rad54l	100	83.671	Pygocentrus_nattereri
ENSACLG00000018711	rad54l	99	76.676	ENSRNOG00000013148	Rad54l	99	76.676	Rattus_norvegicus
ENSACLG00000018711	rad54l	99	77.078	ENSRBIG00000043495	RAD54L	99	77.078	Rhinopithecus_bieti
ENSACLG00000018711	rad54l	99	76.944	ENSRROG00000020844	RAD54L	99	76.944	Rhinopithecus_roxellana
ENSACLG00000018711	rad54l	84	48.541	YGL163C	RAD54	71	49.767	Saccharomyces_cerevisiae
ENSACLG00000018711	rad54l	99	77.212	ENSSBOG00000024672	RAD54L	99	77.212	Saimiri_boliviensis_boliviensis
ENSACLG00000018711	rad54l	100	78.016	ENSSHAG00000000110	RAD54L	100	78.016	Sarcophilus_harrisii
ENSACLG00000018711	rad54l	100	88.784	ENSSDUG00000019147	rad54l	100	88.784	Seriola_dumerili
ENSACLG00000018711	rad54l	100	88.784	ENSSLDG00000012330	rad54l	100	88.784	Seriola_lalandi_dorsalis
ENSACLG00000018711	rad54l	84	76.726	ENSSARG00000006689	RAD54L	100	76.726	Sorex_araneus
ENSACLG00000018711	rad54l	99	88.179	ENSSPAG00000011016	rad54l	99	88.179	Stegastes_partitus
ENSACLG00000018711	rad54l	99	76.944	ENSSSCG00000003905	RAD54L	99	76.944	Sus_scrofa
ENSACLG00000018711	rad54l	99	79.004	ENSTGUG00000008233	RAD54L	99	79.408	Taeniopygia_guttata
ENSACLG00000018711	rad54l	99	83.148	ENSTRUG00000008410	rad54l	100	82.869	Takifugu_rubripes
ENSACLG00000018711	rad54l	99	79.946	ENSTNIG00000004716	rad54l	99	79.946	Tetraodon_nigroviridis
ENSACLG00000018711	rad54l	99	72.497	ENSTTRG00000006315	RAD54L	99	72.497	Tursiops_truncatus
ENSACLG00000018711	rad54l	99	76.383	ENSUAMG00000011824	RAD54L	99	76.383	Ursus_americanus
ENSACLG00000018711	rad54l	99	75.169	ENSUMAG00000023603	RAD54L	99	75.169	Ursus_maritimus
ENSACLG00000018711	rad54l	99	77.078	ENSVVUG00000007201	RAD54L	99	77.078	Vulpes_vulpes
ENSACLG00000018711	rad54l	96	75.035	ENSXETG00000004369	rad54l	99	75.035	Xenopus_tropicalis
ENSACLG00000018711	rad54l	55	81.572	ENSXCOG00000016028	rad54l	82	84.127	Xiphophorus_couchianus