EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000018721 (Gene tree)
Gene ID: 113020194
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 8101 bases
Position: chr4:2105482-2113582
Accession: 113020194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000027556	MMR_HSR1	PF01926.23	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000028201	-	1471	-	ENSACLP00000027556	209 (aa)	XP_026019742	UPI000D305C0A

Gene Model

Click here to download ENSACLG00000018721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018721's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000018721	si:dkey-16l2.16	90	43.684	ENSACLG00000000860	-	75	46.108
ENSACLG00000018721	si:dkey-16l2.16	55	30.172	ENSACLG00000027139	arl3	61	30.172
ENSACLG00000018721	si:dkey-16l2.16	76	62.500	ENSACLG00000003326	-	79	62.500
ENSACLG00000018721	si:dkey-16l2.16	77	44.512	ENSACLG00000007514	rab42a	76	44.512
ENSACLG00000018721	si:dkey-16l2.16	73	48.387	ENSACLG00000011484	rab18a	75	48.387
ENSACLG00000018721	si:dkey-16l2.16	78	61.963	ENSACLG00000007644	rab1ab	79	63.125
ENSACLG00000018721	si:dkey-16l2.16	76	37.267	ENSACLG00000027515	KRAS	83	37.267
ENSACLG00000018721	si:dkey-16l2.16	87	48.352	ENSACLG00000023526	rab30	88	48.315
ENSACLG00000018721	si:dkey-16l2.16	96	37.811	ENSACLG00000002706	rab5c	72	43.671
ENSACLG00000018721	si:dkey-16l2.16	74	34.161	ENSACLG00000004019	dnajc27	59	34.161
ENSACLG00000018721	si:dkey-16l2.16	83	34.225	ENSACLG00000003898	rab32b	73	36.875
ENSACLG00000018721	si:dkey-16l2.16	100	34.884	ENSACLG00000004795	rab9b	80	37.569
ENSACLG00000018721	si:dkey-16l2.16	75	46.203	ENSACLG00000018066	rab5aa	72	46.795
ENSACLG00000018721	si:dkey-16l2.16	98	41.148	ENSACLG00000007076	rab11bb	80	45.402
ENSACLG00000018721	si:dkey-16l2.16	83	30.460	ENSACLG00000025632	rabl2	76	30.460
ENSACLG00000018721	si:dkey-16l2.16	74	41.935	ENSACLG00000021470	rab22a	80	41.935
ENSACLG00000018721	si:dkey-16l2.16	95	33.171	ENSACLG00000005733	rab34b	63	35.542
ENSACLG00000018721	si:dkey-16l2.16	82	46.821	ENSACLG00000001646	-	82	46.821
ENSACLG00000018721	si:dkey-16l2.16	78	36.686	ENSACLG00000008646	rheb	88	36.686
ENSACLG00000018721	si:dkey-16l2.16	53	36.607	ENSACLG00000014417	RAP2B	93	36.290
ENSACLG00000018721	si:dkey-16l2.16	92	45.876	ENSACLG00000026336	rab15	82	48.851
ENSACLG00000018721	si:dkey-16l2.16	91	40.196	ENSACLG00000005720	rab33ba	62	48.649
ENSACLG00000018721	si:dkey-16l2.16	77	47.561	ENSACLG00000009468	RAB39B	75	48.750
ENSACLG00000018721	si:dkey-16l2.16	80	39.306	ENSACLG00000024502	-	83	39.306
ENSACLG00000018721	si:dkey-16l2.16	96	32.850	ENSACLG00000006647	rab9a	79	38.125
ENSACLG00000018721	si:dkey-16l2.16	79	31.492	ENSACLG00000019293	rasl11a	69	31.492
ENSACLG00000018721	si:dkey-16l2.16	80	39.306	ENSACLG00000018847	RAB7A	83	39.306
ENSACLG00000018721	si:dkey-16l2.16	99	51.691	ENSACLG00000013668	rab1ba	81	61.111
ENSACLG00000018721	si:dkey-16l2.16	98	41.627	ENSACLG00000005446	-	80	45.402
ENSACLG00000018721	si:dkey-16l2.16	77	46.951	ENSACLG00000022893	-	75	48.125
ENSACLG00000018721	si:dkey-16l2.16	84	46.369	ENSACLG00000015289	rab18b	84	47.399
ENSACLG00000018721	si:dkey-16l2.16	76	37.267	ENSACLG00000001181	hrasb	83	37.267
ENSACLG00000018721	si:dkey-16l2.16	61	30.534	ENSACLG00000024991	arl4d	58	31.356
ENSACLG00000018721	si:dkey-16l2.16	83	41.954	ENSACLG00000018852	-	79	41.954
ENSACLG00000018721	si:dkey-16l2.16	76	32.716	ENSACLG00000005453	-	77	32.716
ENSACLG00000018721	si:dkey-16l2.16	78	42.683	ENSACLG00000013505	-	76	42.331
ENSACLG00000018721	si:dkey-16l2.16	77	40.244	ENSACLG00000025138	rab6ba	79	40.244
ENSACLG00000018721	si:dkey-16l2.16	72	32.075	ENSACLG00000016163	rasl11b	70	30.508
ENSACLG00000018721	si:dkey-16l2.16	79	41.317	ENSACLG00000008615	-	75	41.317
ENSACLG00000018721	si:dkey-16l2.16	73	40.909	ENSACLG00000019423	rab41	73	40.909
ENSACLG00000018721	si:dkey-16l2.16	98	52.381	ENSACLG00000013734	-	77	62.577
ENSACLG00000018721	si:dkey-16l2.16	98	39.423	ENSACLG00000010268	rab11al	74	47.799
ENSACLG00000018721	si:dkey-16l2.16	100	41.395	ENSACLG00000005420	rab11ba	83	45.000
ENSACLG00000018721	si:dkey-16l2.16	97	33.333	ENSACLG00000021109	si:dkey-13a21.4	81	37.500
ENSACLG00000018721	si:dkey-16l2.16	73	40.000	ENSACLG00000008602	RAB29	96	40.000
ENSACLG00000018721	si:dkey-16l2.16	98	42.927	ENSACLG00000010251	rab25b	76	47.468
ENSACLG00000018721	si:dkey-16l2.16	76	37.267	ENSACLG00000027677	KRAS	83	37.267
ENSACLG00000018721	si:dkey-16l2.16	74	35.897	ENSACLG00000001218	RAB17	68	35.897
ENSACLG00000018721	si:dkey-16l2.16	95	35.545	ENSACLG00000005093	rab34a	63	39.053
ENSACLG00000018721	si:dkey-16l2.16	79	42.632	ENSACLG00000010965	-	79	42.632
ENSACLG00000018721	si:dkey-16l2.16	77	32.099	ENSACLG00000011249	rras	82	32.099
ENSACLG00000018721	si:dkey-16l2.16	78	43.030	ENSACLG00000007696	rab12	69	42.515
ENSACLG00000018721	si:dkey-16l2.16	67	34.043	ENSACLG00000002819	rab23	69	33.333
ENSACLG00000018721	si:dkey-16l2.16	55	30.172	ENSACLG00000000922	arl5c	68	30.172
ENSACLG00000018721	si:dkey-16l2.16	77	40.606	ENSACLG00000026487	rab6bb	77	39.869
ENSACLG00000018721	si:dkey-16l2.16	77	46.951	ENSACLG00000027590	-	75	48.125
ENSACLG00000018721	si:dkey-16l2.16	82	34.659	ENSACLG00000009103	si:cabz01085950.1	83	35.329
ENSACLG00000018721	si:dkey-16l2.16	85	45.946	ENSACLG00000021547	rab33a	61	45.930
ENSACLG00000018721	si:dkey-16l2.16	78	43.558	ENSACLG00000006329	-	76	43.558
ENSACLG00000018721	si:dkey-16l2.16	81	50.588	ENSACLG00000019643	-	85	50.588
ENSACLG00000018721	si:dkey-16l2.16	73	35.256	ENSACLG00000007804	si:ch73-116o1.2	82	33.721
ENSACLG00000018721	si:dkey-16l2.16	86	44.041	ENSACLG00000027006	zgc:101559	78	44.022
ENSACLG00000018721	si:dkey-16l2.16	99	43.478	ENSACLG00000001775	rab11a	96	41.748
ENSACLG00000018721	si:dkey-16l2.16	75	47.468	ENSACLG00000018262	rab25a	75	47.468
ENSACLG00000018721	si:dkey-16l2.16	78	36.095	ENSACLG00000024456	-	80	36.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018721	si:dkey-16l2.16	100	94.258	ENSAPOG00000008263	si:dkey-16l2.16	100	94.258	Acanthochromis_polyacanthus
ENSACLG00000018721	si:dkey-16l2.16	100	95.694	ENSAOCG00000016825	si:dkey-16l2.16	100	95.694	Amphiprion_ocellaris
ENSACLG00000018721	si:dkey-16l2.16	100	95.694	ENSAPEG00000006500	si:dkey-16l2.16	100	95.694	Amphiprion_percula
ENSACLG00000018721	si:dkey-16l2.16	100	94.258	ENSATEG00000019238	si:dkey-16l2.16	100	94.258	Anabas_testudineus
ENSACLG00000018721	si:dkey-16l2.16	100	94.737	ENSAMXG00000038243	si:dkey-16l2.16	100	94.737	Astyanax_mexicanus
ENSACLG00000018721	si:dkey-16l2.16	56	97.458	ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	Cynoglossus_semilaevis
ENSACLG00000018721	si:dkey-16l2.16	100	94.258	ENSCVAG00000003537	si:dkey-16l2.16	100	94.258	Cyprinodon_variegatus
ENSACLG00000018721	si:dkey-16l2.16	100	92.823	ENSDARG00000037967	si:dkey-16l2.16	99	98.305	Danio_rerio
ENSACLG00000018721	si:dkey-16l2.16	99	87.500	ENSELUG00000023247	si:dkey-16l2.16	99	86.538	Esox_lucius
ENSACLG00000018721	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSACLG00000018721	si:dkey-16l2.16	77	85.714	ENSGMOG00000015174	si:dkey-16l2.16	98	85.714	Gadus_morhua
ENSACLG00000018721	si:dkey-16l2.16	100	88.038	ENSGAFG00000005388	si:dkey-16l2.16	100	88.038	Gambusia_affinis
ENSACLG00000018721	si:dkey-16l2.16	100	94.737	ENSGACG00000014915	si:dkey-16l2.16	98	94.737	Gasterosteus_aculeatus
ENSACLG00000018721	si:dkey-16l2.16	100	99.522	ENSHBUG00000019261	si:dkey-16l2.16	100	99.522	Haplochromis_burtoni
ENSACLG00000018721	si:dkey-16l2.16	100	93.301	ENSHCOG00000006538	si:dkey-16l2.16	100	93.301	Hippocampus_comes
ENSACLG00000018721	si:dkey-16l2.16	100	90.431	ENSKMAG00000003494	si:dkey-16l2.16	100	90.431	Kryptolebias_marmoratus
ENSACLG00000018721	si:dkey-16l2.16	100	95.215	ENSLBEG00000007681	si:dkey-16l2.16	100	95.215	Labrus_bergylta
ENSACLG00000018721	si:dkey-16l2.16	100	93.780	ENSMAMG00000019230	si:dkey-16l2.16	100	93.780	Mastacembelus_armatus
ENSACLG00000018721	si:dkey-16l2.16	100	100.000	ENSMZEG00005002081	si:dkey-16l2.16	100	100.000	Maylandia_zebra
ENSACLG00000018721	si:dkey-16l2.16	99	95.146	ENSMMOG00000020140	si:dkey-16l2.16	97	95.146	Mola_mola
ENSACLG00000018721	si:dkey-16l2.16	100	93.301	ENSMALG00000014727	si:dkey-16l2.16	99	93.301	Monopterus_albus
ENSACLG00000018721	si:dkey-16l2.16	100	98.565	ENSNBRG00000008930	si:dkey-16l2.16	100	98.565	Neolamprologus_brichardi
ENSACLG00000018721	si:dkey-16l2.16	100	99.043	ENSONIG00000009443	si:dkey-16l2.16	100	99.043	Oreochromis_niloticus
ENSACLG00000018721	si:dkey-16l2.16	100	88.995	ENSORLG00000001098	si:dkey-16l2.16	99	88.995	Oryzias_latipes
ENSACLG00000018721	si:dkey-16l2.16	100	88.995	ENSORLG00020000867	si:dkey-16l2.16	99	88.995	Oryzias_latipes_hni
ENSACLG00000018721	si:dkey-16l2.16	100	88.038	ENSOMEG00000015474	si:dkey-16l2.16	100	87.560	Oryzias_melastigma
ENSACLG00000018721	si:dkey-16l2.16	100	79.426	ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	Paramormyrops_kingsleyae
ENSACLG00000018721	si:dkey-16l2.16	100	94.737	ENSPKIG00000005686	-	100	94.737	Paramormyrops_kingsleyae
ENSACLG00000018721	si:dkey-16l2.16	100	93.301	ENSPMGG00000000751	si:dkey-16l2.16	100	93.301	Periophthalmus_magnuspinnatus
ENSACLG00000018721	si:dkey-16l2.16	100	88.995	ENSPFOG00000004746	si:dkey-16l2.16	100	88.995	Poecilia_formosa
ENSACLG00000018721	si:dkey-16l2.16	100	88.517	ENSPLAG00000021043	si:dkey-16l2.16	100	88.517	Poecilia_latipinna
ENSACLG00000018721	si:dkey-16l2.16	100	88.995	ENSPMEG00000007165	si:dkey-16l2.16	100	88.995	Poecilia_mexicana
ENSACLG00000018721	si:dkey-16l2.16	100	88.517	ENSPREG00000005323	si:dkey-16l2.16	100	88.517	Poecilia_reticulata
ENSACLG00000018721	si:dkey-16l2.16	100	99.522	ENSPNYG00000009490	si:dkey-16l2.16	100	99.522	Pundamilia_nyererei
ENSACLG00000018721	si:dkey-16l2.16	100	95.215	ENSPNAG00000018986	si:dkey-16l2.16	100	95.215	Pygocentrus_nattereri
ENSACLG00000018721	si:dkey-16l2.16	99	81.731	ENSSFOG00015006414	-	85	84.746	Scleropages_formosus
ENSACLG00000018721	si:dkey-16l2.16	100	92.823	ENSSFOG00015021448	-	100	92.823	Scleropages_formosus
ENSACLG00000018721	si:dkey-16l2.16	100	90.909	ENSSMAG00000011769	si:dkey-16l2.16	94	90.909	Scophthalmus_maximus
ENSACLG00000018721	si:dkey-16l2.16	100	95.694	ENSSDUG00000005719	si:dkey-16l2.16	100	95.694	Seriola_dumerili
ENSACLG00000018721	si:dkey-16l2.16	100	95.694	ENSSLDG00000003631	si:dkey-16l2.16	100	95.694	Seriola_lalandi_dorsalis
ENSACLG00000018721	si:dkey-16l2.16	100	95.694	ENSSPAG00000006302	si:dkey-16l2.16	100	95.694	Stegastes_partitus
ENSACLG00000018721	si:dkey-16l2.16	100	93.780	ENSTRUG00000025076	si:dkey-16l2.16	100	93.780	Takifugu_rubripes
ENSACLG00000018721	si:dkey-16l2.16	100	93.780	ENSTNIG00000011300	si:dkey-16l2.16	100	93.780	Tetraodon_nigroviridis
ENSACLG00000018721	si:dkey-16l2.16	100	88.517	ENSXMAG00000021767	si:dkey-16l2.16	100	88.517	Xiphophorus_maculatus