EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000018778 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 3048 bases
Position: chr19:7892118-7895165
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000027625	RVT_1	PF00078.27	1.9e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000028272	-	3048	-	ENSACLP00000027625	1015 (aa)	-	-

Gene Model

Click here to download ENSACLG00000018778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000018778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000018778	-	65	53.951	ENSACLG00000001858	-	92	53.951
ENSACLG00000018778	-	67	61.640	ENSACLG00000021942	-	99	61.640
ENSACLG00000018778	-	81	98.785	ENSACLG00000018002	-	96	98.785
ENSACLG00000018778	-	65	98.343	ENSACLG00000019498	-	94	98.343
ENSACLG00000018778	-	61	53.462	ENSACLG00000007954	-	92	53.462
ENSACLG00000018778	-	61	53.462	ENSACLG00000005489	-	92	53.462
ENSACLG00000018778	-	96	58.384	ENSACLG00000017200	-	95	58.078
ENSACLG00000018778	-	59	54.515	ENSACLG00000027577	-	97	54.515
ENSACLG00000018778	-	55	58.602	ENSACLG00000017241	-	92	58.602
ENSACLG00000018778	-	80	53.742	ENSACLG00000013374	-	94	53.742
ENSACLG00000018778	-	93	54.478	ENSACLG00000016551	-	94	54.478
ENSACLG00000018778	-	61	57.073	ENSACLG00000000579	-	93	57.073
ENSACLG00000018778	-	97	98.983	ENSACLG00000007650	-	96	98.983
ENSACLG00000018778	-	76	54.994	ENSACLG00000003707	-	93	54.994
ENSACLG00000018778	-	73	55.436	ENSACLG00000027127	-	100	55.436
ENSACLG00000018778	-	59	55.017	ENSACLG00000020849	-	91	55.017
ENSACLG00000018778	-	74	52.674	ENSACLG00000001102	-	97	52.674
ENSACLG00000018778	-	93	53.348	ENSACLG00000002312	-	93	53.348
ENSACLG00000018778	-	51	97.856	ENSACLG00000016956	-	92	97.856
ENSACLG00000018778	-	74	60.481	ENSACLG00000001773	-	99	60.481
ENSACLG00000018778	-	76	62.274	ENSACLG00000004427	-	95	62.274
ENSACLG00000018778	-	85	55.064	ENSACLG00000008988	-	93	55.064
ENSACLG00000018778	-	58	96.599	ENSACLG00000020009	-	100	96.599

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000018778	-	61	49.840	ENSKMAG00000004644	-	91	49.840	Kryptolebias_marmoratus
ENSACLG00000018778	-	71	62.517	ENSLBEG00000015802	-	100	62.517	Labrus_bergylta
ENSACLG00000018778	-	50	63.261	ENSLBEG00000008627	-	91	63.261	Labrus_bergylta
ENSACLG00000018778	-	60	63.993	ENSLBEG00000018374	-	92	63.993	Labrus_bergylta
ENSACLG00000018778	-	50	62.353	ENSLBEG00000009271	-	100	62.353	Labrus_bergylta
ENSACLG00000018778	-	59	54.849	ENSMZEG00005026189	-	91	54.849	Maylandia_zebra
ENSACLG00000018778	-	52	51.711	ENSMALG00000008286	-	93	51.711	Monopterus_albus
ENSACLG00000018778	-	52	51.901	ENSMALG00000018226	-	93	51.901	Monopterus_albus
ENSACLG00000018778	-	76	52.406	ENSMALG00000007417	-	99	52.406	Monopterus_albus
ENSACLG00000018778	-	52	52.281	ENSMALG00000021030	-	93	52.281	Monopterus_albus
ENSACLG00000018778	-	66	50.966	ENSMALG00000020948	-	94	50.966	Monopterus_albus
ENSACLG00000018778	-	52	52.091	ENSMALG00000007425	-	93	52.091	Monopterus_albus
ENSACLG00000018778	-	66	50.593	ENSONIG00000021263	-	87	50.593	Oreochromis_niloticus
ENSACLG00000018778	-	52	55.639	ENSONIG00000020746	-	97	55.639	Oreochromis_niloticus
ENSACLG00000018778	-	97	53.589	ENSORLG00000028049	-	95	53.185	Oryzias_latipes
ENSACLG00000018778	-	55	61.261	ENSORLG00000022703	-	88	61.261	Oryzias_latipes
ENSACLG00000018778	-	74	60.558	ENSORLG00000026858	-	89	60.558	Oryzias_latipes
ENSACLG00000018778	-	87	60.630	ENSORLG00000023570	-	89	60.630	Oryzias_latipes
ENSACLG00000018778	-	68	54.215	ENSORLG00000030053	-	94	54.215	Oryzias_latipes
ENSACLG00000018778	-	63	60.692	ENSORLG00000030445	-	93	60.692	Oryzias_latipes
ENSACLG00000018778	-	63	30.448	ENSORLG00015005330	-	98	30.448	Oryzias_latipes_hsok
ENSACLG00000018778	-	93	49.263	ENSOMEG00000004858	-	92	49.263	Oryzias_melastigma
ENSACLG00000018778	-	53	36.496	ENSOMEG00000012000	-	97	36.496	Oryzias_melastigma
ENSACLG00000018778	-	51	55.192	ENSOMEG00000008180	-	93	55.192	Oryzias_melastigma
ENSACLG00000018778	-	93	49.263	ENSOMEG00000013089	-	92	49.263	Oryzias_melastigma
ENSACLG00000018778	-	50	61.024	ENSPNYG00000010168	-	90	61.024	Pundamilia_nyererei
ENSACLG00000018778	-	71	47.724	ENSXMAG00000029300	-	100	47.724	Xiphophorus_maculatus
ENSACLG00000018778	-	89	45.925	ENSXMAG00000023391	-	90	46.404	Xiphophorus_maculatus
ENSACLG00000018778	-	75	48.568	ENSXMAG00000023609	-	95	48.568	Xiphophorus_maculatus
ENSACLG00000018778	-	68	46.974	ENSXMAG00000024044	-	99	46.974	Xiphophorus_maculatus
ENSACLG00000018778	-	69	46.790	ENSXMAG00000026064	-	93	47.438	Xiphophorus_maculatus