EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000019031 (Gene tree)
Gene ID: 113026296
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 13321 bases
Position: chr7:43242532-43255852
Accession: 113026296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000028020	PRP4	PF08799.11	3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000028678	-	3520	-	ENSACLP00000028020	510 (aa)	XP_026030691	UPI000329B8EF

Gene Model

Click here to download ENSACLG00000019031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000019031's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000019031	prpf4	58	31.687	ENSACLG00000027954	tbl3	88	31.687
ENSACLG00000019031	prpf4	56	31.875	ENSACLG00000017869	POC1A	79	31.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000019031	prpf4	99	76.984	ENSG00000136875	PRPF4	96	76.984	Homo_sapiens
ENSACLG00000019031	prpf4	99	93.996	ENSAPOG00000014132	prpf4	99	93.996	Acanthochromis_polyacanthus
ENSACLG00000019031	prpf4	99	76.984	ENSAMEG00000013048	PRPF4	94	76.984	Ailuropoda_melanoleuca
ENSACLG00000019031	prpf4	100	96.667	ENSACIG00000005579	prpf4	100	96.667	Amphilophus_citrinellus
ENSACLG00000019031	prpf4	100	94.314	ENSAOCG00000005457	prpf4	100	94.314	Amphiprion_ocellaris
ENSACLG00000019031	prpf4	100	94.118	ENSAPEG00000000776	prpf4	100	94.118	Amphiprion_percula
ENSACLG00000019031	prpf4	100	94.314	ENSATEG00000023013	prpf4	100	94.314	Anabas_testudineus
ENSACLG00000019031	prpf4	99	76.923	ENSAPLG00000006534	PRPF4	94	76.923	Anas_platyrhynchos
ENSACLG00000019031	prpf4	99	74.951	ENSACAG00000015110	PRPF4	98	74.951	Anolis_carolinensis
ENSACLG00000019031	prpf4	99	76.984	ENSANAG00000022464	PRPF4	93	76.984	Aotus_nancymaae
ENSACLG00000019031	prpf4	100	63.118	ENSAMXG00000006756	prpf4	100	73.529	Astyanax_mexicanus
ENSACLG00000019031	prpf4	99	76.984	ENSBTAG00000004571	PRPF4	96	76.984	Bos_taurus
ENSACLG00000019031	prpf4	92	44.211	WBGene00007972	prp-4	96	44.211	Caenorhabditis_elegans
ENSACLG00000019031	prpf4	99	76.984	ENSCJAG00000017856	PRPF4	96	76.984	Callithrix_jacchus
ENSACLG00000019031	prpf4	99	76.984	ENSCAFG00000003224	PRPF4	93	76.984	Canis_familiaris
ENSACLG00000019031	prpf4	99	76.984	ENSCAFG00020022637	PRPF4	97	76.984	Canis_lupus_dingo
ENSACLG00000019031	prpf4	99	76.984	ENSCHIG00000024648	-	96	76.984	Capra_hircus
ENSACLG00000019031	prpf4	99	77.183	ENSTSYG00000010366	PRPF4	96	77.183	Carlito_syrichta
ENSACLG00000019031	prpf4	90	69.212	ENSCAPG00000008935	PRPF4	97	69.212	Cavia_aperea
ENSACLG00000019031	prpf4	99	71.627	ENSCPOG00000014729	-	96	71.627	Cavia_porcellus
ENSACLG00000019031	prpf4	99	76.587	ENSCPOG00000010747	-	96	76.587	Cavia_porcellus
ENSACLG00000019031	prpf4	99	76.786	ENSCCAG00000028990	PRPF4	96	76.786	Cebus_capucinus
ENSACLG00000019031	prpf4	99	76.984	ENSCATG00000021552	PRPF4	96	76.984	Cercocebus_atys
ENSACLG00000019031	prpf4	99	76.984	ENSCLAG00000013448	PRPF4	96	76.984	Chinchilla_lanigera
ENSACLG00000019031	prpf4	89	76.549	ENSCHOG00000007233	PRPF4	100	76.549	Choloepus_hoffmanni
ENSACLG00000019031	prpf4	99	76.134	ENSCPBG00000019136	PRPF4	73	76.134	Chrysemys_picta_bellii
ENSACLG00000019031	prpf4	100	58.509	ENSCING00000001299	-	100	58.509	Ciona_intestinalis
ENSACLG00000019031	prpf4	98	58.218	ENSCSAVG00000009178	-	99	60.000	Ciona_savignyi
ENSACLG00000019031	prpf4	99	76.984	ENSCANG00000003246	PRPF4	96	76.984	Colobus_angolensis_palliatus
ENSACLG00000019031	prpf4	99	76.786	ENSCGRG00001016992	Prpf4	96	76.786	Cricetulus_griseus_chok1gshd
ENSACLG00000019031	prpf4	99	76.786	ENSCGRG00000017560	Prpf4	96	76.786	Cricetulus_griseus_crigri
ENSACLG00000019031	prpf4	100	87.451	ENSCSEG00000020451	prpf4	100	87.451	Cynoglossus_semilaevis
ENSACLG00000019031	prpf4	100	79.804	ENSDARG00000067639	prpf4	100	79.804	Danio_rerio
ENSACLG00000019031	prpf4	99	76.786	ENSDNOG00000013203	PRPF4	96	76.786	Dasypus_novemcinctus
ENSACLG00000019031	prpf4	99	77.381	ENSDORG00000026275	Prpf4	96	77.381	Dipodomys_ordii
ENSACLG00000019031	prpf4	99	50.091	FBgn0036733	U4-U6-60K	99	50.272	Drosophila_melanogaster
ENSACLG00000019031	prpf4	99	77.579	ENSETEG00000020389	PRPF4	96	77.579	Echinops_telfairi
ENSACLG00000019031	prpf4	99	68.315	ENSEBUG00000015229	prpf4	88	68.989	Eptatretus_burgeri
ENSACLG00000019031	prpf4	99	76.984	ENSEASG00005022678	PRPF4	96	76.984	Equus_asinus_asinus
ENSACLG00000019031	prpf4	99	76.984	ENSECAG00000007072	PRPF4	96	76.984	Equus_caballus
ENSACLG00000019031	prpf4	98	60.909	ENSEEUG00000007480	PRPF4	96	60.909	Erinaceus_europaeus
ENSACLG00000019031	prpf4	100	80.588	ENSELUG00000007510	prpf4	100	80.588	Esox_lucius
ENSACLG00000019031	prpf4	99	76.984	ENSFCAG00000005514	PRPF4	96	76.984	Felis_catus
ENSACLG00000019031	prpf4	99	76.072	ENSFALG00000005423	PRPF4	85	76.072	Ficedula_albicollis
ENSACLG00000019031	prpf4	99	76.984	ENSFDAG00000005839	PRPF4	96	76.984	Fukomys_damarensis
ENSACLG00000019031	prpf4	100	92.549	ENSFHEG00000001300	prpf4	100	92.549	Fundulus_heteroclitus
ENSACLG00000019031	prpf4	99	76.726	ENSGALG00000008857	PRPF4	94	76.726	Gallus_gallus
ENSACLG00000019031	prpf4	85	90.274	ENSGAFG00000012164	prpf4	68	90.274	Gambusia_affinis
ENSACLG00000019031	prpf4	100	81.445	ENSGACG00000015476	prpf4	100	81.250	Gasterosteus_aculeatus
ENSACLG00000019031	prpf4	99	75.740	ENSGAGG00000025029	PRPF4	94	75.740	Gopherus_agassizii
ENSACLG00000019031	prpf4	99	76.984	ENSGGOG00000006943	PRPF4	96	76.984	Gorilla_gorilla
ENSACLG00000019031	prpf4	100	99.608	ENSHBUG00000000562	prpf4	100	99.608	Haplochromis_burtoni
ENSACLG00000019031	prpf4	99	76.984	ENSHGLG00000015191	PRPF4	96	76.984	Heterocephalus_glaber_female
ENSACLG00000019031	prpf4	95	66.258	ENSHGLG00000016628	-	95	66.667	Heterocephalus_glaber_female
ENSACLG00000019031	prpf4	99	62.500	ENSHGLG00000003838	-	96	62.500	Heterocephalus_glaber_female
ENSACLG00000019031	prpf4	99	62.500	ENSHGLG00100005571	-	96	62.500	Heterocephalus_glaber_male
ENSACLG00000019031	prpf4	100	78.431	ENSIPUG00000017956	PRPF4	100	78.431	Ictalurus_punctatus
ENSACLG00000019031	prpf4	99	76.984	ENSSTOG00000027833	PRPF4	96	76.984	Ictidomys_tridecemlineatus
ENSACLG00000019031	prpf4	99	76.984	ENSJJAG00000008838	Prpf4	96	76.984	Jaculus_jaculus
ENSACLG00000019031	prpf4	100	91.961	ENSKMAG00000013236	prpf4	100	91.961	Kryptolebias_marmoratus
ENSACLG00000019031	prpf4	100	93.725	ENSLBEG00000020611	prpf4	100	93.725	Labrus_bergylta
ENSACLG00000019031	prpf4	100	72.266	ENSLACG00000016317	PRPF4	97	72.266	Latimeria_chalumnae
ENSACLG00000019031	prpf4	100	81.373	ENSLOCG00000000581	prpf4	100	81.373	Lepisosteus_oculatus
ENSACLG00000019031	prpf4	99	76.984	ENSLAFG00000018225	PRPF4	96	76.984	Loxodonta_africana
ENSACLG00000019031	prpf4	99	76.786	ENSMFAG00000039397	PRPF4	96	76.786	Macaca_fascicularis
ENSACLG00000019031	prpf4	99	76.984	ENSMMUG00000005844	PRPF4	96	76.984	Macaca_mulatta
ENSACLG00000019031	prpf4	99	68.254	ENSMNEG00000033737	PRPF4	96	68.254	Macaca_nemestrina
ENSACLG00000019031	prpf4	99	76.984	ENSMLEG00000040284	PRPF4	96	76.984	Mandrillus_leucophaeus
ENSACLG00000019031	prpf4	100	93.922	ENSMAMG00000020141	prpf4	100	93.922	Mastacembelus_armatus
ENSACLG00000019031	prpf4	100	100.000	ENSMZEG00005023205	prpf4	100	100.000	Maylandia_zebra
ENSACLG00000019031	prpf4	99	76.134	ENSMGAG00000001796	PRPF4	94	76.134	Meleagris_gallopavo
ENSACLG00000019031	prpf4	99	76.786	ENSMAUG00000018022	Prpf4	96	76.786	Mesocricetus_auratus
ENSACLG00000019031	prpf4	99	76.424	ENSMICG00000015022	PRPF4	97	76.424	Microcebus_murinus
ENSACLG00000019031	prpf4	99	76.786	ENSMOCG00000018273	Prpf4	96	76.786	Microtus_ochrogaster
ENSACLG00000019031	prpf4	100	90.980	ENSMMOG00000021177	prpf4	100	90.980	Mola_mola
ENSACLG00000019031	prpf4	99	75.937	ENSMODG00000004444	-	97	75.937	Monodelphis_domestica
ENSACLG00000019031	prpf4	99	75.345	ENSMODG00000025096	-	94	75.345	Monodelphis_domestica
ENSACLG00000019031	prpf4	100	94.510	ENSMALG00000013624	prpf4	100	94.510	Monopterus_albus
ENSACLG00000019031	prpf4	99	76.786	MGP_CAROLIEiJ_G0026078	Prpf4	96	76.786	Mus_caroli
ENSACLG00000019031	prpf4	99	76.786	ENSMUSG00000066148	Prpf4	96	76.786	Mus_musculus
ENSACLG00000019031	prpf4	99	76.984	MGP_PahariEiJ_G0028413	Prpf4	96	76.984	Mus_pahari
ENSACLG00000019031	prpf4	99	76.786	MGP_SPRETEiJ_G0027042	Prpf4	96	76.786	Mus_spretus
ENSACLG00000019031	prpf4	99	76.984	ENSMPUG00000007883	PRPF4	96	76.984	Mustela_putorius_furo
ENSACLG00000019031	prpf4	99	75.595	ENSMLUG00000008626	-	94	75.595	Myotis_lucifugus
ENSACLG00000019031	prpf4	99	76.786	ENSMLUG00000015309	-	93	76.786	Myotis_lucifugus
ENSACLG00000019031	prpf4	99	71.825	ENSNGAG00000000468	Prpf4	96	71.825	Nannospalax_galili
ENSACLG00000019031	prpf4	100	99.804	ENSNBRG00000007972	prpf4	100	99.804	Neolamprologus_brichardi
ENSACLG00000019031	prpf4	99	76.984	ENSNLEG00000016647	PRPF4	96	76.984	Nomascus_leucogenys
ENSACLG00000019031	prpf4	99	75.246	ENSMEUG00000013256	PRPF4	98	75.542	Notamacropus_eugenii
ENSACLG00000019031	prpf4	99	77.183	ENSOPRG00000005302	PRPF4	96	77.183	Ochotona_princeps
ENSACLG00000019031	prpf4	99	76.984	ENSODEG00000018147	PRPF4	96	76.984	Octodon_degus
ENSACLG00000019031	prpf4	100	98.824	ENSONIG00000012671	prpf4	100	98.824	Oreochromis_niloticus
ENSACLG00000019031	prpf4	99	77.183	ENSOCUG00000005046	PRPF4	96	77.183	Oryctolagus_cuniculus
ENSACLG00000019031	prpf4	100	91.176	ENSORLG00000019641	prpf4	100	91.176	Oryzias_latipes
ENSACLG00000019031	prpf4	100	91.176	ENSORLG00020019438	prpf4	100	91.176	Oryzias_latipes_hni
ENSACLG00000019031	prpf4	100	90.392	ENSOMEG00000020941	prpf4	100	91.097	Oryzias_melastigma
ENSACLG00000019031	prpf4	99	72.817	ENSOGAG00000007802	PRPF4	94	72.817	Otolemur_garnettii
ENSACLG00000019031	prpf4	99	76.984	ENSOARG00000006319	PRPF4	93	76.984	Ovis_aries
ENSACLG00000019031	prpf4	99	76.984	ENSPPAG00000041797	PRPF4	96	76.984	Pan_paniscus
ENSACLG00000019031	prpf4	99	76.984	ENSPPRG00000014360	PRPF4	96	76.984	Panthera_pardus
ENSACLG00000019031	prpf4	99	76.984	ENSPTIG00000009574	PRPF4	96	76.984	Panthera_tigris_altaica
ENSACLG00000019031	prpf4	99	76.984	ENSPTRG00000021274	PRPF4	96	76.984	Pan_troglodytes
ENSACLG00000019031	prpf4	99	77.183	ENSPANG00000025776	PRPF4	92	77.183	Papio_anubis
ENSACLG00000019031	prpf4	100	80.980	ENSPKIG00000017259	prpf4	100	80.980	Paramormyrops_kingsleyae
ENSACLG00000019031	prpf4	100	76.078	ENSPSIG00000010713	PRPF4	89	76.331	Pelodiscus_sinensis
ENSACLG00000019031	prpf4	100	65.985	ENSPMGG00000000997	prpf4	98	67.286	Periophthalmus_magnuspinnatus
ENSACLG00000019031	prpf4	99	76.786	ENSPEMG00000024115	Prpf4	96	76.786	Peromyscus_maniculatus_bairdii
ENSACLG00000019031	prpf4	99	75.442	ENSPCIG00000003821	PRPF4	98	75.740	Phascolarctos_cinereus
ENSACLG00000019031	prpf4	100	85.798	ENSPFOG00000013524	prpf4	99	89.970	Poecilia_formosa
ENSACLG00000019031	prpf4	84	88.820	ENSPLAG00000011620	prpf4	96	88.820	Poecilia_latipinna
ENSACLG00000019031	prpf4	98	90.265	ENSPMEG00000006813	prpf4	100	90.265	Poecilia_mexicana
ENSACLG00000019031	prpf4	99	76.786	ENSPCAG00000002561	PRPF4	98	76.786	Procavia_capensis
ENSACLG00000019031	prpf4	99	76.786	ENSPCOG00000011975	PRPF4	96	76.786	Propithecus_coquereli
ENSACLG00000019031	prpf4	99	73.810	ENSPVAG00000004708	PRPF4	96	73.810	Pteropus_vampyrus
ENSACLG00000019031	prpf4	100	99.804	ENSPNYG00000008013	prpf4	100	99.804	Pundamilia_nyererei
ENSACLG00000019031	prpf4	100	79.804	ENSPNAG00000000697	prpf4	100	80.000	Pygocentrus_nattereri
ENSACLG00000019031	prpf4	99	76.786	ENSRNOG00000014777	Prpf4	96	76.786	Rattus_norvegicus
ENSACLG00000019031	prpf4	99	76.984	ENSRBIG00000040221	PRPF4	96	76.984	Rhinopithecus_bieti
ENSACLG00000019031	prpf4	99	76.984	ENSRROG00000040240	PRPF4	96	76.984	Rhinopithecus_roxellana
ENSACLG00000019031	prpf4	99	75.740	ENSSHAG00000017658	PRPF4	97	75.740	Sarcophilus_harrisii
ENSACLG00000019031	prpf4	100	81.961	ENSSFOG00015008963	prpf4	100	81.961	Scleropages_formosus
ENSACLG00000019031	prpf4	100	91.961	ENSSMAG00000008889	prpf4	100	91.961	Scophthalmus_maximus
ENSACLG00000019031	prpf4	99	94.617	ENSSDUG00000022083	prpf4	94	94.617	Seriola_dumerili
ENSACLG00000019031	prpf4	99	94.410	ENSSLDG00000008115	prpf4	94	94.410	Seriola_lalandi_dorsalis
ENSACLG00000019031	prpf4	99	76.228	ENSSPUG00000015582	PRPF4	97	76.228	Sphenodon_punctatus
ENSACLG00000019031	prpf4	100	87.329	ENSSPAG00000011286	prpf4	100	87.329	Stegastes_partitus
ENSACLG00000019031	prpf4	99	76.984	ENSSSCG00000024648	PRPF4	96	76.984	Sus_scrofa
ENSACLG00000019031	prpf4	97	77.576	ENSTGUG00000002623	PRPF4	100	77.800	Taeniopygia_guttata
ENSACLG00000019031	prpf4	100	87.843	ENSTRUG00000008853	prpf4	100	87.843	Takifugu_rubripes
ENSACLG00000019031	prpf4	100	88.845	ENSTNIG00000013250	prpf4	100	88.845	Tetraodon_nigroviridis
ENSACLG00000019031	prpf4	99	69.841	ENSTBEG00000000821	PRPF4	96	69.841	Tupaia_belangeri
ENSACLG00000019031	prpf4	89	78.859	ENSTTRG00000003246	PRPF4	85	78.859	Tursiops_truncatus
ENSACLG00000019031	prpf4	62	73.186	ENSUAMG00000018288	PRPF4	88	73.786	Ursus_americanus
ENSACLG00000019031	prpf4	99	76.389	ENSUMAG00000019375	PRPF4	96	76.389	Ursus_maritimus
ENSACLG00000019031	prpf4	99	76.587	ENSVPAG00000005281	PRPF4	96	76.587	Vicugna_pacos
ENSACLG00000019031	prpf4	99	76.181	ENSVVUG00000002476	PRPF4	99	75.984	Vulpes_vulpes
ENSACLG00000019031	prpf4	70	65.934	ENSXCOG00000006101	prpf4	93	68.949	Xiphophorus_couchianus
ENSACLG00000019031	prpf4	91	77.849	ENSXMAG00000002750	prpf4	100	79.216	Xiphophorus_maculatus