EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000019106 (Gene tree)
Gene ID: 113021928
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 31238 bases
Position: chr5:4780885-4812122
Accession: 113021928
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000028255	R3H	PF01424.22	1.1e-10	1	1
ENSACLP00000028112	R3H	PF01424.22	1.1e-10	1	1
ENSACLP00000028176	R3H	PF01424.22	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000028773	-	6227	-	ENSACLP00000028112	1071 (aa)	XP_026022581	UPI000647993F
ENSACLT00000028837	-	6191	-	ENSACLP00000028176	1059 (aa)	XP_026022584	UPI000C23532A
ENSACLT00000028917	-	6128	-	ENSACLP00000028255	1038 (aa)	XP_026022588	UPI000C24BDDA

Gene Model

Click here to download ENSACLG00000019106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000019106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000019106	r3hdm2	72	58.766	ENSACLG00000027282	r3hdm1	82	59.740

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000019106	r3hdm2	99	65.521	ENSG00000179912	R3HDM2	96	68.285	Homo_sapiens
ENSACLG00000019106	r3hdm2	100	97.395	ENSAPOG00000020341	r3hdm2	100	97.395	Acanthochromis_polyacanthus
ENSACLG00000019106	r3hdm2	56	37.778	ENSAPOG00000021873	-	70	41.326	Acanthochromis_polyacanthus
ENSACLG00000019106	r3hdm2	95	67.500	ENSAMEG00000004812	R3HDM2	99	64.927	Ailuropoda_melanoleuca
ENSACLG00000019106	r3hdm2	94	89.815	ENSACIG00000016146	r3hdm2	98	89.815	Amphilophus_citrinellus
ENSACLG00000019106	r3hdm2	100	97.302	ENSAOCG00000023694	r3hdm2	100	97.302	Amphiprion_ocellaris
ENSACLG00000019106	r3hdm2	100	96.519	ENSAPEG00000008851	r3hdm2	100	96.519	Amphiprion_percula
ENSACLG00000019106	r3hdm2	100	93.097	ENSATEG00000025024	r3hdm2	100	92.522	Anabas_testudineus
ENSACLG00000019106	r3hdm2	100	55.980	ENSAPLG00000004298	R3HDM2	99	59.383	Anas_platyrhynchos
ENSACLG00000019106	r3hdm2	99	62.698	ENSACAG00000006388	R3HDM2	99	60.558	Anolis_carolinensis
ENSACLG00000019106	r3hdm2	97	62.952	ENSANAG00000031310	-	98	60.580	Aotus_nancymaae
ENSACLG00000019106	r3hdm2	99	65.425	ENSANAG00000025397	-	99	64.088	Aotus_nancymaae
ENSACLG00000019106	r3hdm2	95	69.889	ENSAMXG00000017180	r3hdm2	99	72.044	Astyanax_mexicanus
ENSACLG00000019106	r3hdm2	96	66.534	ENSBTAG00000018361	R3HDM2	99	63.403	Bos_taurus
ENSACLG00000019106	r3hdm2	99	64.605	ENSCJAG00000007365	R3HDM2	99	63.897	Callithrix_jacchus
ENSACLG00000019106	r3hdm2	95	66.468	ENSCAFG00000000215	R3HDM2	99	63.223	Canis_familiaris
ENSACLG00000019106	r3hdm2	95	67.502	ENSCAFG00020023713	R3HDM2	99	64.581	Canis_lupus_dingo
ENSACLG00000019106	r3hdm2	95	67.792	ENSCHIG00000014022	R3HDM2	99	65.133	Capra_hircus
ENSACLG00000019106	r3hdm2	99	64.723	ENSTSYG00000001449	R3HDM2	99	62.830	Carlito_syrichta
ENSACLG00000019106	r3hdm2	99	66.821	ENSCPOG00000009217	R3HDM2	99	64.384	Cavia_porcellus
ENSACLG00000019106	r3hdm2	87	66.194	ENSCCAG00000026083	R3HDM2	99	65.389	Cebus_capucinus
ENSACLG00000019106	r3hdm2	99	66.142	ENSCATG00000036929	R3HDM2	99	65.342	Cercocebus_atys
ENSACLG00000019106	r3hdm2	95	68.527	ENSCLAG00000011997	R3HDM2	99	65.293	Chinchilla_lanigera
ENSACLG00000019106	r3hdm2	99	66.387	ENSCSAG00000004911	R3HDM2	99	65.205	Chlorocebus_sabaeus
ENSACLG00000019106	r3hdm2	73	67.540	ENSCHOG00000005636	R3HDM2	89	68.209	Choloepus_hoffmanni
ENSACLG00000019106	r3hdm2	95	65.851	ENSCPBG00000013922	R3HDM2	99	62.993	Chrysemys_picta_bellii
ENSACLG00000019106	r3hdm2	99	65.501	ENSCANG00000043807	R3HDM2	99	65.157	Colobus_angolensis_palliatus
ENSACLG00000019106	r3hdm2	99	64.587	ENSCGRG00001017324	R3hdm2	99	62.218	Cricetulus_griseus_chok1gshd
ENSACLG00000019106	r3hdm2	99	64.587	ENSCGRG00000003862	R3hdm2	99	62.218	Cricetulus_griseus_crigri
ENSACLG00000019106	r3hdm2	100	91.737	ENSCSEG00000010925	r3hdm2	99	93.107	Cynoglossus_semilaevis
ENSACLG00000019106	r3hdm2	100	90.960	ENSCVAG00000009058	r3hdm2	100	90.602	Cyprinodon_variegatus
ENSACLG00000019106	r3hdm2	94	72.898	ENSDARG00000102610	r3hdm2	99	73.617	Danio_rerio
ENSACLG00000019106	r3hdm2	99	65.181	ENSDNOG00000015033	R3HDM2	100	65.664	Dasypus_novemcinctus
ENSACLG00000019106	r3hdm2	95	63.781	ENSDORG00000011462	R3hdm2	99	63.121	Dipodomys_ordii
ENSACLG00000019106	r3hdm2	96	68.073	ENSEASG00005007091	R3HDM2	99	65.409	Equus_asinus_asinus
ENSACLG00000019106	r3hdm2	96	67.526	ENSECAG00000003157	R3HDM2	99	65.317	Equus_caballus
ENSACLG00000019106	r3hdm2	100	80.215	ENSELUG00000015969	r3hdm2	100	79.857	Esox_lucius
ENSACLG00000019106	r3hdm2	95	67.792	ENSFCAG00000000192	R3HDM2	98	65.279	Felis_catus
ENSACLG00000019106	r3hdm2	80	63.968	ENSFALG00000000255	R3HDM2	99	60.324	Ficedula_albicollis
ENSACLG00000019106	r3hdm2	95	67.723	ENSFDAG00000019385	R3HDM2	99	63.505	Fukomys_damarensis
ENSACLG00000019106	r3hdm2	100	91.635	ENSFHEG00000016484	r3hdm2	100	91.276	Fundulus_heteroclitus
ENSACLG00000019106	r3hdm2	95	82.927	ENSGMOG00000007961	r3hdm2	100	82.863	Gadus_morhua
ENSACLG00000019106	r3hdm2	99	65.525	ENSGALG00000043736	R3HDM2	99	63.777	Gallus_gallus
ENSACLG00000019106	r3hdm2	100	92.279	ENSGAFG00000013887	r3hdm2	100	91.405	Gambusia_affinis
ENSACLG00000019106	r3hdm2	95	90.643	ENSGACG00000006442	r3hdm2	100	91.529	Gasterosteus_aculeatus
ENSACLG00000019106	r3hdm2	95	65.569	ENSGAGG00000017797	R3HDM2	99	62.327	Gopherus_agassizii
ENSACLG00000019106	r3hdm2	99	66.142	ENSGGOG00000015007	R3HDM2	99	65.342	Gorilla_gorilla
ENSACLG00000019106	r3hdm2	95	68.401	ENSHGLG00000010434	-	99	65.170	Heterocephalus_glaber_female
ENSACLG00000019106	r3hdm2	89	60.638	ENSHGLG00000010421	-	97	58.606	Heterocephalus_glaber_female
ENSACLG00000019106	r3hdm2	95	58.641	ENSHGLG00100018871	-	98	56.845	Heterocephalus_glaber_male
ENSACLG00000019106	r3hdm2	95	68.304	ENSHGLG00100004183	-	99	65.078	Heterocephalus_glaber_male
ENSACLG00000019106	r3hdm2	100	87.290	ENSHCOG00000001142	r3hdm2	97	88.219	Hippocampus_comes
ENSACLG00000019106	r3hdm2	100	76.007	ENSIPUG00000023873	r3hdm2	100	75.916	Ictalurus_punctatus
ENSACLG00000019106	r3hdm2	99	61.678	ENSSTOG00000013424	R3HDM2	99	60.208	Ictidomys_tridecemlineatus
ENSACLG00000019106	r3hdm2	99	65.746	ENSJJAG00000010001	R3hdm2	99	64.495	Jaculus_jaculus
ENSACLG00000019106	r3hdm2	100	92.938	ENSKMAG00000012695	r3hdm2	97	93.220	Kryptolebias_marmoratus
ENSACLG00000019106	r3hdm2	50	40.998	ENSLBEG00000002779	-	82	39.312	Labrus_bergylta
ENSACLG00000019106	r3hdm2	100	93.025	ENSLBEG00000013115	r3hdm2	96	93.497	Labrus_bergylta
ENSACLG00000019106	r3hdm2	95	67.408	ENSLACG00000019064	r3hdm2	100	65.800	Latimeria_chalumnae
ENSACLG00000019106	r3hdm2	99	74.499	ENSLOCG00000005976	r3hdm2	99	73.830	Lepisosteus_oculatus
ENSACLG00000019106	r3hdm2	99	66.481	ENSLAFG00000006510	R3HDM2	99	65.342	Loxodonta_africana
ENSACLG00000019106	r3hdm2	99	66.142	ENSMFAG00000036385	R3HDM2	99	65.342	Macaca_fascicularis
ENSACLG00000019106	r3hdm2	99	66.883	ENSMMUG00000021789	R3HDM2	99	66.081	Macaca_mulatta
ENSACLG00000019106	r3hdm2	99	66.266	ENSMNEG00000025314	R3HDM2	99	65.342	Macaca_nemestrina
ENSACLG00000019106	r3hdm2	99	66.235	ENSMLEG00000028915	R3HDM2	99	65.434	Mandrillus_leucophaeus
ENSACLG00000019106	r3hdm2	55	38.474	ENSMAMG00000011755	-	73	40.039	Mastacembelus_armatus
ENSACLG00000019106	r3hdm2	100	95.099	ENSMAMG00000009793	r3hdm2	100	95.664	Mastacembelus_armatus
ENSACLG00000019106	r3hdm2	100	100.000	ENSMZEG00005007319	r3hdm2	100	100.000	Maylandia_zebra
ENSACLG00000019106	r3hdm2	96	66.271	ENSMICG00000012389	R3HDM2	99	62.844	Microcebus_murinus
ENSACLG00000019106	r3hdm2	99	64.885	ENSMOCG00000014425	R3hdm2	99	62.726	Microtus_ochrogaster
ENSACLG00000019106	r3hdm2	95	86.350	ENSMMOG00000007448	r3hdm2	99	85.628	Mola_mola
ENSACLG00000019106	r3hdm2	90	86.760	ENSMALG00000010211	r3hdm2	98	85.673	Monopterus_albus
ENSACLG00000019106	r3hdm2	95	67.341	MGP_CAROLIEiJ_G0015896	R3hdm2	99	64.194	Mus_caroli
ENSACLG00000019106	r3hdm2	99	65.777	ENSMUSG00000025404	R3hdm2	99	64.377	Mus_musculus
ENSACLG00000019106	r3hdm2	95	67.599	MGP_PahariEiJ_G0031189	R3hdm2	99	64.528	Mus_pahari
ENSACLG00000019106	r3hdm2	99	65.625	MGP_SPRETEiJ_G0016722	R3hdm2	99	64.044	Mus_spretus
ENSACLG00000019106	r3hdm2	93	67.787	ENSMPUG00000001818	R3HDM2	96	64.133	Mustela_putorius_furo
ENSACLG00000019106	r3hdm2	99	66.482	ENSMLUG00000004980	R3HDM2	99	65.133	Myotis_lucifugus
ENSACLG00000019106	r3hdm2	99	65.654	ENSNGAG00000018800	R3hdm2	99	64.895	Nannospalax_galili
ENSACLG00000019106	r3hdm2	94	91.522	ENSNBRG00000004483	r3hdm2	100	91.522	Neolamprologus_brichardi
ENSACLG00000019106	r3hdm2	99	66.174	ENSNLEG00000017351	R3HDM2	99	65.434	Nomascus_leucogenys
ENSACLG00000019106	r3hdm2	99	57.895	ENSMEUG00000008588	R3HDM2	99	56.136	Notamacropus_eugenii
ENSACLG00000019106	r3hdm2	99	59.696	ENSOPRG00000013670	R3HDM2	99	57.994	Ochotona_princeps
ENSACLG00000019106	r3hdm2	100	95.476	ENSONIG00000005075	r3hdm2	100	95.476	Oreochromis_niloticus
ENSACLG00000019106	r3hdm2	99	66.116	ENSOCUG00000013258	R3HDM2	99	64.442	Oryctolagus_cuniculus
ENSACLG00000019106	r3hdm2	100	89.342	ENSORLG00000005502	r3hdm2	100	89.537	Oryzias_latipes
ENSACLG00000019106	r3hdm2	51	35.948	ENSORLG00000011606	-	69	37.952	Oryzias_latipes
ENSACLG00000019106	r3hdm2	100	89.915	ENSORLG00020017069	r3hdm2	100	90.113	Oryzias_latipes_hni
ENSACLG00000019106	r3hdm2	100	90.009	ENSORLG00015012735	r3hdm2	100	90.207	Oryzias_latipes_hsok
ENSACLG00000019106	r3hdm2	100	82.692	ENSOMEG00000018079	r3hdm2	99	82.788	Oryzias_melastigma
ENSACLG00000019106	r3hdm2	96	57.270	ENSOGAG00000027966	-	99	55.909	Otolemur_garnettii
ENSACLG00000019106	r3hdm2	96	65.197	ENSOGAG00000012055	R3HDM2	99	62.754	Otolemur_garnettii
ENSACLG00000019106	r3hdm2	96	66.010	ENSOARG00000006929	R3HDM2	99	63.318	Ovis_aries
ENSACLG00000019106	r3hdm2	99	66.327	ENSPPAG00000034395	R3HDM2	99	65.527	Pan_paniscus
ENSACLG00000019106	r3hdm2	95	66.267	ENSPPRG00000009240	R3HDM2	99	63.515	Panthera_pardus
ENSACLG00000019106	r3hdm2	95	66.267	ENSPTIG00000008752	R3HDM2	99	63.515	Panthera_tigris_altaica
ENSACLG00000019106	r3hdm2	99	66.235	ENSPTRG00000046457	R3HDM2	99	65.434	Pan_troglodytes
ENSACLG00000019106	r3hdm2	95	67.033	ENSPANG00000024002	R3HDM2	97	65.569	Papio_anubis
ENSACLG00000019106	r3hdm2	100	79.213	ENSPKIG00000003171	r3hdm2	100	80.337	Paramormyrops_kingsleyae
ENSACLG00000019106	r3hdm2	94	86.228	ENSPMGG00000007061	r3hdm2	99	84.908	Periophthalmus_magnuspinnatus
ENSACLG00000019106	r3hdm2	99	65.253	ENSPEMG00000015964	R3hdm2	99	63.978	Peromyscus_maniculatus_bairdii
ENSACLG00000019106	r3hdm2	99	64.313	ENSPCIG00000023841	R3HDM2	99	62.868	Phascolarctos_cinereus
ENSACLG00000019106	r3hdm2	94	82.408	ENSPFOG00000006077	r3hdm2	98	82.126	Poecilia_formosa
ENSACLG00000019106	r3hdm2	100	92.467	ENSPLAG00000002971	r3hdm2	100	92.105	Poecilia_latipinna
ENSACLG00000019106	r3hdm2	100	92.467	ENSPMEG00000005330	r3hdm2	100	92.105	Poecilia_mexicana
ENSACLG00000019106	r3hdm2	100	91.902	ENSPREG00000008424	r3hdm2	100	91.541	Poecilia_reticulata
ENSACLG00000019106	r3hdm2	97	61.171	ENSPPYG00000004685	R3HDM2	80	60.117	Pongo_abelii
ENSACLG00000019106	r3hdm2	88	81.295	ENSPCAG00000014642	R3HDM2	92	81.455	Procavia_capensis
ENSACLG00000019106	r3hdm2	96	66.435	ENSPCOG00000013201	R3HDM2	99	63.308	Propithecus_coquereli
ENSACLG00000019106	r3hdm2	99	66.543	ENSPVAG00000003967	R3HDM2	99	65.041	Pteropus_vampyrus
ENSACLG00000019106	r3hdm2	94	89.217	ENSPNYG00000013479	r3hdm2	100	88.403	Pundamilia_nyererei
ENSACLG00000019106	r3hdm2	100	75.678	ENSPNAG00000017473	r3hdm2	100	77.507	Pygocentrus_nattereri
ENSACLG00000019106	r3hdm2	95	66.795	ENSRNOG00000007801	R3hdm2	99	64.029	Rattus_norvegicus
ENSACLG00000019106	r3hdm2	99	63.419	ENSRBIG00000037403	R3HDM2	99	62.082	Rhinopithecus_bieti
ENSACLG00000019106	r3hdm2	99	66.975	ENSRROG00000022271	R3HDM2	99	65.434	Rhinopithecus_roxellana
ENSACLG00000019106	r3hdm2	99	64.924	ENSSBOG00000023547	R3HDM2	99	63.992	Saimiri_boliviensis_boliviensis
ENSACLG00000019106	r3hdm2	99	64.114	ENSSHAG00000003511	R3HDM2	99	64.355	Sarcophilus_harrisii
ENSACLG00000019106	r3hdm2	95	78.226	ENSSFOG00015011219	r3hdm2	99	77.117	Scleropages_formosus
ENSACLG00000019106	r3hdm2	100	93.290	ENSSMAG00000012073	r3hdm2	100	92.086	Scophthalmus_maximus
ENSACLG00000019106	r3hdm2	100	95.399	ENSSDUG00000019269	r3hdm2	100	95.399	Seriola_dumerili
ENSACLG00000019106	r3hdm2	100	96.093	ENSSLDG00000005252	r3hdm2	100	96.093	Seriola_lalandi_dorsalis
ENSACLG00000019106	r3hdm2	90	60.580	ENSSARG00000003958	R3HDM2	79	71.111	Sorex_araneus
ENSACLG00000019106	r3hdm2	95	62.949	ENSSPUG00000014132	R3HDM2	99	58.867	Sphenodon_punctatus
ENSACLG00000019106	r3hdm2	50	39.755	ENSSPAG00000016856	-	69	40.574	Stegastes_partitus
ENSACLG00000019106	r3hdm2	100	96.519	ENSSPAG00000022594	r3hdm2	100	96.519	Stegastes_partitus
ENSACLG00000019106	r3hdm2	96	66.304	ENSSSCG00000026498	R3HDM2	100	66.558	Sus_scrofa
ENSACLG00000019106	r3hdm2	72	64.286	ENSTGUG00000015881	R3HDM2	99	62.245	Taeniopygia_guttata
ENSACLG00000019106	r3hdm2	95	84.413	ENSTRUG00000015075	r3hdm2	99	83.182	Takifugu_rubripes
ENSACLG00000019106	r3hdm2	92	96.369	ENSTNIG00000007057	r3hdm2	90	97.486	Tetraodon_nigroviridis
ENSACLG00000019106	r3hdm2	79	63.123	ENSTBEG00000015967	R3HDM2	75	63.123	Tupaia_belangeri
ENSACLG00000019106	r3hdm2	89	75.969	ENSTTRG00000013082	R3HDM2	87	70.346	Tursiops_truncatus
ENSACLG00000019106	r3hdm2	95	67.415	ENSUAMG00000020913	R3HDM2	99	64.717	Ursus_americanus
ENSACLG00000019106	r3hdm2	91	66.701	ENSUMAG00000019179	R3HDM2	96	64.694	Ursus_maritimus
ENSACLG00000019106	r3hdm2	90	76.299	ENSVPAG00000008656	R3HDM2	89	80.743	Vicugna_pacos
ENSACLG00000019106	r3hdm2	93	67.787	ENSVVUG00000018014	R3HDM2	95	64.783	Vulpes_vulpes
ENSACLG00000019106	r3hdm2	99	62.454	ENSXETG00000017153	r3hdm2	99	61.843	Xenopus_tropicalis
ENSACLG00000019106	r3hdm2	87	87.638	ENSXCOG00000013882	r3hdm2	100	85.683	Xiphophorus_couchianus
ENSACLG00000019106	r3hdm2	100	92.185	ENSXMAG00000017978	r3hdm2	100	91.405	Xiphophorus_maculatus