EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000019154 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4316 bases
Position: chr3:38584789-38589104
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000028203	zf-C2H2	PF00096.26	2.2e-13	1	2
ENSACLP00000028203	zf-C2H2	PF00096.26	2.2e-13	2	2
ENSACLP00000028203	zf-met	PF12874.7	7.1e-07	1	2
ENSACLP00000028203	zf-met	PF12874.7	7.1e-07	2	2
ENSACLP00000028203	zf-C2H2_jaz	PF12171.8	6.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000028865	-	300	-	ENSACLP00000028203	99 (aa)	-	-

Gene Model

Click here to download ENSACLG00000019154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000019154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000019154	-	75	47.619	ENSACLG00000011710	-	57	47.619
ENSACLG00000019154	-	75	47.368	ENSACLG00000017849	-	58	45.588
ENSACLG00000019154	-	75	50.000	ENSACLG00000018707	-	77	50.000
ENSACLG00000019154	-	85	46.667	ENSACLG00000022305	-	85	46.667
ENSACLG00000019154	-	86	45.070	ENSACLG00000025251	-	82	45.833
ENSACLG00000019154	-	96	44.118	ENSACLG00000006697	-	56	44.118
ENSACLG00000019154	-	77	56.410	ENSACLG00000018746	-	74	43.243
ENSACLG00000019154	-	75	50.769	ENSACLG00000011658	-	59	50.769
ENSACLG00000019154	-	99	88.889	ENSACLG00000019167	-	68	100.000
ENSACLG00000019154	-	75	48.571	ENSACLG00000001368	-	90	48.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000019154	-	75	44.595	ENSACIG00000017892	-	59	44.595	Amphilophus_citrinellus
ENSACLG00000019154	-	94	44.595	ENSAPEG00000001556	-	65	44.595	Amphiprion_percula
ENSACLG00000019154	-	90	42.647	ENSATEG00000018931	-	70	42.647	Anabas_testudineus
ENSACLG00000019154	-	75	50.000	ENSCSEG00000015593	-	75	50.000	Cynoglossus_semilaevis
ENSACLG00000019154	-	77	44.737	ENSCSEG00000010264	-	54	44.737	Cynoglossus_semilaevis
ENSACLG00000019154	-	78	46.512	ENSCVAG00000020141	-	59	46.512	Cyprinodon_variegatus
ENSACLG00000019154	-	75	49.091	ENSCVAG00000012682	-	56	49.091	Cyprinodon_variegatus
ENSACLG00000019154	-	83	45.833	ENSGAFG00000008204	-	63	45.833	Gambusia_affinis
ENSACLG00000019154	-	75	45.833	ENSGAFG00000001879	-	55	45.833	Gambusia_affinis
ENSACLG00000019154	-	99	47.059	ENSHCOG00000020670	-	84	47.059	Hippocampus_comes
ENSACLG00000019154	-	76	43.000	ENSKMAG00000007699	-	52	43.000	Kryptolebias_marmoratus
ENSACLG00000019154	-	76	46.269	ENSLBEG00000007106	-	61	46.269	Labrus_bergylta
ENSACLG00000019154	-	78	50.794	ENSORLG00000021885	-	59	48.052	Oryzias_latipes
ENSACLG00000019154	-	81	48.052	ENSORLG00015018099	-	66	48.052	Oryzias_latipes_hsok
ENSACLG00000019154	-	75	45.946	ENSPMGG00000002455	-	64	45.946	Periophthalmus_magnuspinnatus
ENSACLG00000019154	-	92	42.105	ENSPMGG00000019750	-	88	42.105	Periophthalmus_magnuspinnatus
ENSACLG00000019154	-	76	36.765	ENSPMAG00000000839	-	92	36.765	Petromyzon_marinus
ENSACLG00000019154	-	84	40.541	ENSPMAG00000004189	-	70	40.541	Petromyzon_marinus
ENSACLG00000019154	-	78	41.333	ENSPLAG00000014832	-	60	41.333	Poecilia_latipinna
ENSACLG00000019154	-	78	41.333	ENSPMEG00000005210	-	60	41.333	Poecilia_mexicana
ENSACLG00000019154	-	83	40.984	ENSPREG00000009488	-	92	40.984	Poecilia_reticulata
ENSACLG00000019154	-	75	40.541	ENSPREG00000002603	-	55	40.541	Poecilia_reticulata
ENSACLG00000019154	-	83	41.333	ENSXCOG00000000254	-	61	41.333	Xiphophorus_couchianus
ENSACLG00000019154	-	80	41.333	ENSXMAG00000012936	-	59	41.333	Xiphophorus_maculatus