EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000019285 (Gene tree)
Gene ID: 113035035
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 17083 bases
Position: chr13:6317589-6334671
Accession: 113035035
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000028418	KH_1	PF00013.29	4.5e-54	1	3
ENSACLP00000028418	KH_1	PF00013.29	4.5e-54	2	3
ENSACLP00000028418	KH_1	PF00013.29	4.5e-54	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000029085	-	5365	-	ENSACLP00000028418	434 (aa)	XP_026046058	UPI000329C2E2

Gene Model

Click here to download ENSACLG00000019285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000019285's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000019285	zgc:110045	74	34.507	ENSACLG00000000050	igf2bp3	64	34.507
ENSACLG00000019285	zgc:110045	70	31.013	ENSACLG00000003652	igf2bp1	63	31.013
ENSACLG00000019285	zgc:110045	99	55.482	ENSACLG00000025246	-	97	55.921
ENSACLG00000019285	zgc:110045	71	72.964	ENSACLG00000018264	PCBP2	95	72.964
ENSACLG00000019285	zgc:110045	52	37.879	ENSACLG00000020487	khsrp	55	37.879
ENSACLG00000019285	zgc:110045	53	38.202	ENSACLG00000006708	fubp1	64	38.356
ENSACLG00000019285	zgc:110045	68	36.986	ENSACLG00000011819	fubp3	63	36.986
ENSACLG00000019285	zgc:110045	63	34.043	ENSACLG00000001424	KHSRP	64	34.043
ENSACLG00000019285	zgc:110045	100	53.955	ENSACLG00000013348	pcbp4	96	53.955
ENSACLG00000019285	zgc:110045	72	69.254	ENSACLG00000011835	pcbp3	95	69.254
ENSACLG00000019285	zgc:110045	59	43.243	ENSACLG00000001537	hnrpkl	59	43.243
ENSACLG00000019285	zgc:110045	56	41.333	ENSACLG00000018220	hnrnpk	57	41.333
ENSACLG00000019285	zgc:110045	70	35.971	ENSACLG00000015512	igf2bp2a	68	35.971
ENSACLG00000019285	zgc:110045	72	75.641	ENSACLG00000003801	-	96	75.641

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000019285	zgc:110045	72	77.316	ENSG00000183570	PCBP3	97	69.429	Homo_sapiens
ENSACLG00000019285	zgc:110045	73	98.734	ENSAPOG00000023735	zgc:110045	97	98.734	Acanthochromis_polyacanthus
ENSACLG00000019285	zgc:110045	73	93.088	ENSACIG00000002577	zgc:110045	99	93.088	Amphilophus_citrinellus
ENSACLG00000019285	zgc:110045	100	97.465	ENSAPEG00000000729	zgc:110045	100	97.465	Amphiprion_percula
ENSACLG00000019285	zgc:110045	97	90.435	ENSATEG00000011191	zgc:110045	100	90.435	Anabas_testudineus
ENSACLG00000019285	zgc:110045	72	77.316	ENSBTAG00000030775	PCBP3	97	68.857	Bos_taurus
ENSACLG00000019285	zgc:110045	72	72.892	ENSCAFG00000011907	PCBP3	88	72.892	Canis_familiaris
ENSACLG00000019285	zgc:110045	72	70.270	ENSCHIG00000015841	PCBP3	87	70.270	Capra_hircus
ENSACLG00000019285	zgc:110045	88	66.122	ENSTSYG00000005254	PCBP3	95	66.122	Carlito_syrichta
ENSACLG00000019285	zgc:110045	72	56.231	ENSCAPG00000006767	PCBP3	81	56.231	Cavia_aperea
ENSACLG00000019285	zgc:110045	72	72.673	ENSCPOG00000003648	PCBP3	89	72.673	Cavia_porcellus
ENSACLG00000019285	zgc:110045	72	76.997	ENSCCAG00000024561	PCBP3	99	66.087	Cebus_capucinus
ENSACLG00000019285	zgc:110045	72	77.316	ENSCATG00000038419	PCBP3	88	77.316	Cercocebus_atys
ENSACLG00000019285	zgc:110045	72	72.673	ENSCLAG00000006667	PCBP3	88	72.673	Chinchilla_lanigera
ENSACLG00000019285	zgc:110045	72	77.316	ENSCANG00000026757	PCBP3	88	77.316	Colobus_angolensis_palliatus
ENSACLG00000019285	zgc:110045	72	72.673	ENSCGRG00001006836	Pcbp3	88	72.673	Cricetulus_griseus_chok1gshd
ENSACLG00000019285	zgc:110045	72	72.673	ENSCGRG00000001837	Pcbp3	88	72.673	Cricetulus_griseus_crigri
ENSACLG00000019285	zgc:110045	100	93.318	ENSCSEG00000010020	zgc:110045	100	93.318	Cynoglossus_semilaevis
ENSACLG00000019285	zgc:110045	73	90.431	ENSCVAG00000004726	zgc:110045	93	90.431	Cyprinodon_variegatus
ENSACLG00000019285	zgc:110045	50	79.724	ENSDARG00000057141	zgc:110045	97	79.724	Danio_rerio
ENSACLG00000019285	zgc:110045	72	72.673	ENSDNOG00000049518	PCBP3	89	72.673	Dasypus_novemcinctus
ENSACLG00000019285	zgc:110045	54	67.373	ENSEBUG00000009697	zgc:110045	99	67.606	Eptatretus_burgeri
ENSACLG00000019285	zgc:110045	72	76.997	ENSEASG00005007068	PCBP3	88	76.997	Equus_asinus_asinus
ENSACLG00000019285	zgc:110045	72	76.997	ENSECAG00000012413	PCBP3	88	76.997	Equus_caballus
ENSACLG00000019285	zgc:110045	100	85.355	ENSELUG00000019784	zgc:110045	100	84.668	Esox_lucius
ENSACLG00000019285	zgc:110045	72	76.997	ENSFCAG00000014812	PCBP3	88	76.997	Felis_catus
ENSACLG00000019285	zgc:110045	72	76.997	ENSFDAG00000009117	PCBP3	88	76.997	Fukomys_damarensis
ENSACLG00000019285	zgc:110045	73	93.035	ENSFHEG00000018838	-	92	93.035	Fundulus_heteroclitus
ENSACLG00000019285	zgc:110045	70	92.182	ENSGMOG00000005953	zgc:110045	93	92.182	Gadus_morhua
ENSACLG00000019285	zgc:110045	59	85.204	ENSGAFG00000017860	-	100	85.204	Gambusia_affinis
ENSACLG00000019285	zgc:110045	73	96.330	ENSGAFG00000017864	zgc:110045	96	96.330	Gambusia_affinis
ENSACLG00000019285	zgc:110045	72	95.860	ENSGACG00000003044	zgc:110045	97	95.860	Gasterosteus_aculeatus
ENSACLG00000019285	zgc:110045	72	77.316	ENSGGOG00000003683	PCBP3	88	77.316	Gorilla_gorilla
ENSACLG00000019285	zgc:110045	73	99.684	ENSHBUG00000012495	zgc:110045	97	99.684	Haplochromis_burtoni
ENSACLG00000019285	zgc:110045	72	72.673	ENSHGLG00000018620	PCBP3	89	72.673	Heterocephalus_glaber_female
ENSACLG00000019285	zgc:110045	72	72.673	ENSHGLG00100013590	PCBP3	89	72.673	Heterocephalus_glaber_male
ENSACLG00000019285	zgc:110045	73	76.833	ENSHCOG00000000818	zgc:110045	99	89.450	Hippocampus_comes
ENSACLG00000019285	zgc:110045	59	66.540	ENSIPUG00000003932	zgc:110045	97	66.540	Ictalurus_punctatus
ENSACLG00000019285	zgc:110045	72	72.673	ENSSTOG00000007178	PCBP3	88	72.673	Ictidomys_tridecemlineatus
ENSACLG00000019285	zgc:110045	72	72.973	ENSJJAG00000021192	Pcbp3	88	72.973	Jaculus_jaculus
ENSACLG00000019285	zgc:110045	97	82.319	ENSKMAG00000016179	-	95	95.897	Kryptolebias_marmoratus
ENSACLG00000019285	zgc:110045	73	88.288	ENSLBEG00000023074	zgc:110045	97	88.288	Labrus_bergylta
ENSACLG00000019285	zgc:110045	69	75.214	ENSLAFG00000020835	PCBP3	96	75.214	Loxodonta_africana
ENSACLG00000019285	zgc:110045	72	77.316	ENSMFAG00000034574	PCBP3	88	77.316	Macaca_fascicularis
ENSACLG00000019285	zgc:110045	72	77.316	ENSMMUG00000003825	PCBP3	99	71.517	Macaca_mulatta
ENSACLG00000019285	zgc:110045	72	77.316	ENSMNEG00000035551	PCBP3	97	77.316	Macaca_nemestrina
ENSACLG00000019285	zgc:110045	72	77.316	ENSMLEG00000038785	PCBP3	97	69.565	Mandrillus_leucophaeus
ENSACLG00000019285	zgc:110045	72	97.134	ENSMAMG00000014389	zgc:110045	99	97.134	Mastacembelus_armatus
ENSACLG00000019285	zgc:110045	100	100.000	ENSMZEG00005011785	zgc:110045	100	100.000	Maylandia_zebra
ENSACLG00000019285	zgc:110045	71	73.252	ENSMAUG00000007036	Pcbp3	87	73.252	Mesocricetus_auratus
ENSACLG00000019285	zgc:110045	72	76.997	ENSMICG00000012679	PCBP3	88	76.997	Microcebus_murinus
ENSACLG00000019285	zgc:110045	72	72.673	ENSMOCG00000016127	Pcbp3	88	72.673	Microtus_ochrogaster
ENSACLG00000019285	zgc:110045	59	92.147	ENSMMOG00000008398	-	100	92.147	Mola_mola
ENSACLG00000019285	zgc:110045	72	72.892	MGP_CAROLIEiJ_G0015475	Pcbp3	99	73.799	Mus_caroli
ENSACLG00000019285	zgc:110045	72	72.892	ENSMUSG00000001120	Pcbp3	99	73.799	Mus_musculus
ENSACLG00000019285	zgc:110045	72	72.892	MGP_PahariEiJ_G0030889	Pcbp3	99	73.799	Mus_pahari
ENSACLG00000019285	zgc:110045	72	72.892	MGP_SPRETEiJ_G0016288	Pcbp3	99	73.799	Mus_spretus
ENSACLG00000019285	zgc:110045	72	72.673	ENSMLUG00000003074	PCBP3	88	72.673	Myotis_lucifugus
ENSACLG00000019285	zgc:110045	72	72.673	ENSNGAG00000005416	Pcbp3	88	72.673	Nannospalax_galili
ENSACLG00000019285	zgc:110045	100	99.078	ENSNBRG00000017646	zgc:110045	100	99.078	Neolamprologus_brichardi
ENSACLG00000019285	zgc:110045	72	77.316	ENSNLEG00000002639	PCBP3	88	77.316	Nomascus_leucogenys
ENSACLG00000019285	zgc:110045	72	66.571	ENSMEUG00000012960	PCBP3	97	66.571	Notamacropus_eugenii
ENSACLG00000019285	zgc:110045	72	70.270	ENSODEG00000012873	PCBP3	89	70.270	Octodon_degus
ENSACLG00000019285	zgc:110045	100	93.779	ENSONIG00000010370	zgc:110045	100	93.779	Oreochromis_niloticus
ENSACLG00000019285	zgc:110045	55	71.875	ENSOANG00000006265	PCBP3	90	71.875	Ornithorhynchus_anatinus
ENSACLG00000019285	zgc:110045	100	92.857	ENSORLG00000014385	-	100	92.857	Oryzias_latipes
ENSACLG00000019285	zgc:110045	100	91.244	ENSORLG00020003139	zgc:110045	100	91.475	Oryzias_latipes_hni
ENSACLG00000019285	zgc:110045	100	93.548	ENSOMEG00000015459	-	100	93.548	Oryzias_melastigma
ENSACLG00000019285	zgc:110045	72	70.393	ENSOARG00000012704	PCBP3	88	70.393	Ovis_aries
ENSACLG00000019285	zgc:110045	72	77.316	ENSPPAG00000021940	PCBP3	88	77.316	Pan_paniscus
ENSACLG00000019285	zgc:110045	72	76.997	ENSPPRG00000003933	PCBP3	88	76.997	Panthera_pardus
ENSACLG00000019285	zgc:110045	72	62.975	ENSPTIG00000012038	PCBP3	87	63.578	Panthera_tigris_altaica
ENSACLG00000019285	zgc:110045	72	56.869	ENSPTRG00000014010	PCBP3	97	51.136	Pan_troglodytes
ENSACLG00000019285	zgc:110045	72	77.316	ENSPANG00000023631	PCBP3	88	77.316	Papio_anubis
ENSACLG00000019285	zgc:110045	100	75.283	ENSPMGG00000021588	-	99	75.283	Periophthalmus_magnuspinnatus
ENSACLG00000019285	zgc:110045	50	58.065	ENSPMGG00000022531	-	96	58.065	Periophthalmus_magnuspinnatus
ENSACLG00000019285	zgc:110045	72	72.673	ENSPEMG00000000587	Pcbp3	88	72.673	Peromyscus_maniculatus_bairdii
ENSACLG00000019285	zgc:110045	76	94.578	ENSPFOG00000002348	zgc:110045	100	94.578	Poecilia_formosa
ENSACLG00000019285	zgc:110045	50	92.202	ENSPLAG00000017488	zgc:110045	96	92.202	Poecilia_latipinna
ENSACLG00000019285	zgc:110045	73	96.330	ENSPMEG00000012762	zgc:110045	96	96.330	Poecilia_mexicana
ENSACLG00000019285	zgc:110045	100	92.627	ENSPREG00000001797	zgc:110045	100	92.396	Poecilia_reticulata
ENSACLG00000019285	zgc:110045	57	69.732	ENSPPYG00000011525	-	94	69.732	Pongo_abelii
ENSACLG00000019285	zgc:110045	70	58.529	ENSPCAG00000001454	PCBP3	98	58.529	Procavia_capensis
ENSACLG00000019285	zgc:110045	72	76.997	ENSPCOG00000013797	PCBP3	88	76.997	Propithecus_coquereli
ENSACLG00000019285	zgc:110045	56	78.788	ENSPVAG00000000832	PCBP3	73	78.788	Pteropus_vampyrus
ENSACLG00000019285	zgc:110045	73	94.931	ENSPNYG00000004637	zgc:110045	99	94.931	Pundamilia_nyererei
ENSACLG00000019285	zgc:110045	60	97.959	ENSPNYG00000004656	-	98	97.959	Pundamilia_nyererei
ENSACLG00000019285	zgc:110045	50	80.184	ENSPNAG00000004501	zgc:110045	97	80.184	Pygocentrus_nattereri
ENSACLG00000019285	zgc:110045	72	77.316	ENSRROG00000034567	PCBP3	88	77.316	Rhinopithecus_roxellana
ENSACLG00000019285	zgc:110045	72	77.316	ENSSBOG00000005789	PCBP3	88	77.316	Saimiri_boliviensis_boliviensis
ENSACLG00000019285	zgc:110045	100	95.392	ENSSMAG00000013541	zgc:110045	100	95.392	Scophthalmus_maximus
ENSACLG00000019285	zgc:110045	97	96.812	ENSSDUG00000019371	zgc:110045	100	96.812	Seriola_dumerili
ENSACLG00000019285	zgc:110045	100	97.235	ENSSLDG00000021064	zgc:110045	100	97.235	Seriola_lalandi_dorsalis
ENSACLG00000019285	zgc:110045	73	99.051	ENSSPAG00000000563	zgc:110045	97	99.051	Stegastes_partitus
ENSACLG00000019285	zgc:110045	72	76.997	ENSSSCG00000023041	PCBP3	88	76.997	Sus_scrofa
ENSACLG00000019285	zgc:110045	73	93.970	ENSTRUG00000017789	zgc:110045	98	93.970	Takifugu_rubripes
ENSACLG00000019285	zgc:110045	70	88.421	ENSTNIG00000003546	zgc:110045	94	88.421	Tetraodon_nigroviridis
ENSACLG00000019285	zgc:110045	54	59.072	ENSTBEG00000011882	-	73	59.072	Tupaia_belangeri
ENSACLG00000019285	zgc:110045	69	76.449	ENSUAMG00000006491	PCBP3	96	76.449	Ursus_americanus
ENSACLG00000019285	zgc:110045	72	63.717	ENSUMAG00000025403	PCBP3	88	63.717	Ursus_maritimus
ENSACLG00000019285	zgc:110045	72	68.000	ENSVVUG00000023862	PCBP3	97	64.286	Vulpes_vulpes
ENSACLG00000019285	zgc:110045	79	85.714	ENSXCOG00000005968	zgc:110045	96	85.714	Xiphophorus_couchianus
ENSACLG00000019285	zgc:110045	100	92.857	ENSXMAG00000008030	zgc:110045	100	92.857	Xiphophorus_maculatus