EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000019304 (Gene tree)
Gene ID: 113016450
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 17717 bases
Position: chr23:9421416-9439132
Accession: ZDB-GENE-040426-892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000028552	ResIII	PF04851.15	4e-11	1	1
ENSACLP00000028584	ResIII	PF04851.15	5.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000029224	-	2694	-	ENSACLP00000028552	897 (aa)	-	-
ENSACLT00000029256	-	3450	-	ENSACLP00000028584	994 (aa)	-	-

Gene Model

Click here to download ENSACLG00000019304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000019304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000019304	chd1l	50	38.060	ENSACLG00000007613	hells	67	38.951
ENSACLG00000019304	chd1l	50	31.062	ENSACLG00000018711	rad54l	71	30.709
ENSACLG00000019304	chd1l	50	31.953	ENSACLG00000007826	rad54b	58	32.485
ENSACLG00000019304	chd1l	60	43.066	ENSACLG00000025356	smarca5	52	43.169

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000019304	chd1l	96	64.212	ENSG00000131778	CHD1L	99	64.744	Homo_sapiens
ENSACLG00000019304	chd1l	96	86.897	ENSAPOG00000001539	chd1l	99	88.568	Acanthochromis_polyacanthus
ENSACLG00000019304	chd1l	97	64.326	ENSAMEG00000017063	CHD1L	97	64.237	Ailuropoda_melanoleuca
ENSACLG00000019304	chd1l	96	89.679	ENSACIG00000001164	chd1l	99	90.711	Amphilophus_citrinellus
ENSACLG00000019304	chd1l	96	86.897	ENSAOCG00000014510	chd1l	93	87.447	Amphiprion_ocellaris
ENSACLG00000019304	chd1l	96	83.793	ENSAPEG00000017450	chd1l	95	85.780	Amphiprion_percula
ENSACLG00000019304	chd1l	96	82.683	ENSAPEG00000017573	chd1l	95	85.023	Amphiprion_percula
ENSACLG00000019304	chd1l	96	85.172	ENSATEG00000013058	chd1l	94	85.220	Anabas_testudineus
ENSACLG00000019304	chd1l	94	63.201	ENSAPLG00000009976	CHD1L	95	63.815	Anas_platyrhynchos
ENSACLG00000019304	chd1l	95	61.721	ENSACAG00000017686	CHD1L	98	61.745	Anolis_carolinensis
ENSACLG00000019304	chd1l	96	64.055	ENSANAG00000024347	CHD1L	97	63.667	Aotus_nancymaae
ENSACLG00000019304	chd1l	99	63.252	ENSAMXG00000012367	chd1l	95	62.971	Astyanax_mexicanus
ENSACLG00000019304	chd1l	97	64.472	ENSBTAG00000020831	CHD1L	98	64.117	Bos_taurus
ENSACLG00000019304	chd1l	96	63.657	ENSCJAG00000002406	CHD1L	97	63.440	Callithrix_jacchus
ENSACLG00000019304	chd1l	99	60.579	ENSCAFG00000010944	CHD1L	99	60.245	Canis_familiaris
ENSACLG00000019304	chd1l	99	62.584	ENSCAFG00020020121	CHD1L	99	63.176	Canis_lupus_dingo
ENSACLG00000019304	chd1l	98	64.626	ENSCHIG00000013871	CHD1L	98	64.229	Capra_hircus
ENSACLG00000019304	chd1l	94	64.830	ENSTSYG00000003005	CHD1L	99	64.369	Carlito_syrichta
ENSACLG00000019304	chd1l	96	62.100	ENSCPOG00000009000	CHD1L	98	61.835	Cavia_porcellus
ENSACLG00000019304	chd1l	96	61.714	ENSCCAG00000036079	CHD1L	97	61.503	Cebus_capucinus
ENSACLG00000019304	chd1l	96	64.475	ENSCATG00000031044	CHD1L	97	63.986	Cercocebus_atys
ENSACLG00000019304	chd1l	96	64.055	ENSCLAG00000000880	CHD1L	97	64.384	Chinchilla_lanigera
ENSACLG00000019304	chd1l	96	64.706	ENSCSAG00000018386	CHD1L	97	64.196	Chlorocebus_sabaeus
ENSACLG00000019304	chd1l	95	65.000	ENSCPBG00000002600	CHD1L	97	65.212	Chrysemys_picta_bellii
ENSACLG00000019304	chd1l	96	63.429	ENSCANG00000020239	CHD1L	97	63.194	Colobus_angolensis_palliatus
ENSACLG00000019304	chd1l	96	63.699	ENSCGRG00001021624	Chd1l	98	64.018	Cricetulus_griseus_chok1gshd
ENSACLG00000019304	chd1l	93	64.727	ENSCGRG00000007554	Chd1l	100	64.527	Cricetulus_griseus_crigri
ENSACLG00000019304	chd1l	98	78.603	ENSCVAG00000002595	chd1l	98	79.691	Cyprinodon_variegatus
ENSACLG00000019304	chd1l	96	73.654	ENSDARG00000015471	chd1l	94	70.954	Danio_rerio
ENSACLG00000019304	chd1l	98	63.616	ENSDNOG00000019504	CHD1L	97	64.351	Dasypus_novemcinctus
ENSACLG00000019304	chd1l	97	62.854	ENSDORG00000013555	Chd1l	97	63.740	Dipodomys_ordii
ENSACLG00000019304	chd1l	89	61.620	ENSETEG00000008445	CHD1L	88	61.471	Echinops_telfairi
ENSACLG00000019304	chd1l	68	62.121	ENSEBUG00000005791	chd1l	81	62.121	Eptatretus_burgeri
ENSACLG00000019304	chd1l	97	64.123	ENSEASG00005007364	CHD1L	100	64.614	Equus_asinus_asinus
ENSACLG00000019304	chd1l	97	63.781	ENSECAG00000008915	CHD1L	100	64.493	Equus_caballus
ENSACLG00000019304	chd1l	96	61.162	ENSELUG00000016844	chd1l	93	60.619	Esox_lucius
ENSACLG00000019304	chd1l	96	63.710	ENSFCAG00000007777	CHD1L	97	63.492	Felis_catus
ENSACLG00000019304	chd1l	97	60.589	ENSFALG00000006087	CHD1L	96	62.215	Ficedula_albicollis
ENSACLG00000019304	chd1l	93	64.817	ENSFDAG00000012431	CHD1L	99	63.986	Fukomys_damarensis
ENSACLG00000019304	chd1l	96	81.494	ENSFHEG00000012420	chd1l	94	81.474	Fundulus_heteroclitus
ENSACLG00000019304	chd1l	95	63.188	ENSGALG00000015038	CHD1L	96	63.616	Gallus_gallus
ENSACLG00000019304	chd1l	96	81.435	ENSGAFG00000018198	chd1l	99	78.555	Gambusia_affinis
ENSACLG00000019304	chd1l	56	83.757	ENSGACG00000014042	chd1l	98	84.344	Gasterosteus_aculeatus
ENSACLG00000019304	chd1l	94	65.574	ENSGAGG00000014432	CHD1L	96	65.845	Gopherus_agassizii
ENSACLG00000019304	chd1l	97	62.670	ENSGGOG00000001067	CHD1L	98	62.528	Gorilla_gorilla
ENSACLG00000019304	chd1l	100	99.396	ENSHBUG00000007464	chd1l	100	99.396	Haplochromis_burtoni
ENSACLG00000019304	chd1l	96	63.103	ENSHGLG00000008933	CHD1L	98	62.670	Heterocephalus_glaber_female
ENSACLG00000019304	chd1l	93	61.865	ENSHGLG00100007155	CHD1L	99	61.833	Heterocephalus_glaber_male
ENSACLG00000019304	chd1l	97	75.257	ENSHCOG00000012787	chd1l	94	77.126	Hippocampus_comes
ENSACLG00000019304	chd1l	96	68.535	ENSIPUG00000022617	chd1l	94	66.046	Ictalurus_punctatus
ENSACLG00000019304	chd1l	96	59.655	ENSSTOG00000007032	CHD1L	98	58.957	Ictidomys_tridecemlineatus
ENSACLG00000019304	chd1l	96	83.582	ENSKMAG00000014358	chd1l	93	83.053	Kryptolebias_marmoratus
ENSACLG00000019304	chd1l	96	80.985	ENSLBEG00000023845	chd1l	96	82.524	Labrus_bergylta
ENSACLG00000019304	chd1l	96	60.747	ENSLACG00000006262	CHD1L	93	59.623	Latimeria_chalumnae
ENSACLG00000019304	chd1l	96	72.623	ENSLOCG00000010574	chd1l	93	70.781	Lepisosteus_oculatus
ENSACLG00000019304	chd1l	95	64.733	ENSLAFG00000018136	CHD1L	100	64.460	Loxodonta_africana
ENSACLG00000019304	chd1l	94	64.118	ENSMFAG00000043562	CHD1L	99	64.388	Macaca_fascicularis
ENSACLG00000019304	chd1l	96	64.591	ENSMMUG00000009024	CHD1L	97	64.100	Macaca_mulatta
ENSACLG00000019304	chd1l	96	64.591	ENSMNEG00000039905	CHD1L	97	64.100	Macaca_nemestrina
ENSACLG00000019304	chd1l	96	64.591	ENSMLEG00000030900	CHD1L	97	64.100	Mandrillus_leucophaeus
ENSACLG00000019304	chd1l	96	83.429	ENSMAMG00000012822	chd1l	99	82.989	Mastacembelus_armatus
ENSACLG00000019304	chd1l	100	99.799	ENSMZEG00005020830	chd1l	100	99.799	Maylandia_zebra
ENSACLG00000019304	chd1l	94	63.213	ENSMGAG00000014304	CHD1L	99	64.111	Meleagris_gallopavo
ENSACLG00000019304	chd1l	96	64.335	ENSMICG00000002497	CHD1L	96	65.108	Microcebus_murinus
ENSACLG00000019304	chd1l	97	64.480	ENSMOCG00000006305	Chd1l	98	64.626	Microtus_ochrogaster
ENSACLG00000019304	chd1l	97	75.199	ENSMMOG00000005964	chd1l	91	75.973	Mola_mola
ENSACLG00000019304	chd1l	98	62.472	ENSMODG00000018717	CHD1L	99	62.612	Monodelphis_domestica
ENSACLG00000019304	chd1l	96	84.845	ENSMALG00000014675	chd1l	93	85.263	Monopterus_albus
ENSACLG00000019304	chd1l	97	64.172	MGP_CAROLIEiJ_G0025401	Chd1l	98	64.874	Mus_caroli
ENSACLG00000019304	chd1l	96	64.564	ENSMUSG00000028089	Chd1l	98	64.579	Mus_musculus
ENSACLG00000019304	chd1l	96	64.726	MGP_PahariEiJ_G0026845	Chd1l	98	64.846	Mus_pahari
ENSACLG00000019304	chd1l	96	64.747	MGP_SPRETEiJ_G0026347	Chd1l	98	64.645	Mus_spretus
ENSACLG00000019304	chd1l	98	63.318	ENSMPUG00000000615	CHD1L	97	64.059	Mustela_putorius_furo
ENSACLG00000019304	chd1l	96	63.043	ENSMLUG00000007573	CHD1L	96	62.290	Myotis_lucifugus
ENSACLG00000019304	chd1l	96	59.954	ENSNGAG00000000908	Chd1l	99	60.526	Nannospalax_galili
ENSACLG00000019304	chd1l	98	90.817	ENSNBRG00000006021	chd1l	95	93.111	Neolamprologus_brichardi
ENSACLG00000019304	chd1l	96	63.429	ENSNLEG00000000179	CHD1L	97	63.194	Nomascus_leucogenys
ENSACLG00000019304	chd1l	86	64.381	ENSOPRG00000006973	CHD1L	92	64.381	Ochotona_princeps
ENSACLG00000019304	chd1l	96	59.954	ENSODEG00000002494	CHD1L	97	59.909	Octodon_degus
ENSACLG00000019304	chd1l	99	97.660	ENSONIG00000003183	chd1l	99	97.660	Oreochromis_niloticus
ENSACLG00000019304	chd1l	85	62.308	ENSOANG00000003068	CHD1L	92	62.887	Ornithorhynchus_anatinus
ENSACLG00000019304	chd1l	96	61.074	ENSOCUG00000009336	CHD1L	96	61.417	Oryctolagus_cuniculus
ENSACLG00000019304	chd1l	98	78.434	ENSORLG00000003673	chd1l	95	79.215	Oryzias_latipes
ENSACLG00000019304	chd1l	98	78.661	ENSORLG00020005123	chd1l	99	80.290	Oryzias_latipes_hni
ENSACLG00000019304	chd1l	98	78.079	ENSORLG00015001680	chd1l	99	78.449	Oryzias_latipes_hsok
ENSACLG00000019304	chd1l	75	79.350	ENSOMEG00000006109	chd1l	88	77.273	Oryzias_melastigma
ENSACLG00000019304	chd1l	97	63.440	ENSOGAG00000008775	CHD1L	97	63.543	Otolemur_garnettii
ENSACLG00000019304	chd1l	99	63.870	ENSOARG00000020547	CHD1L	99	65.162	Ovis_aries
ENSACLG00000019304	chd1l	95	63.827	ENSPPAG00000039193	CHD1L	99	64.010	Pan_paniscus
ENSACLG00000019304	chd1l	96	64.442	ENSPPRG00000010258	CHD1L	97	63.946	Panthera_pardus
ENSACLG00000019304	chd1l	96	64.097	ENSPTRG00000001220	CHD1L	97	63.709	Pan_troglodytes
ENSACLG00000019304	chd1l	98	61.969	ENSPANG00000009170	CHD1L	97	63.986	Papio_anubis
ENSACLG00000019304	chd1l	96	71.871	ENSPKIG00000022166	chd1l	97	71.860	Paramormyrops_kingsleyae
ENSACLG00000019304	chd1l	95	64.931	ENSPSIG00000012595	CHD1L	96	64.498	Pelodiscus_sinensis
ENSACLG00000019304	chd1l	97	62.698	ENSPEMG00000013528	Chd1l	98	62.698	Peromyscus_maniculatus_bairdii
ENSACLG00000019304	chd1l	92	63.625	ENSPCIG00000030409	CHD1L	99	63.866	Phascolarctos_cinereus
ENSACLG00000019304	chd1l	96	80.479	ENSPFOG00000015948	chd1l	94	80.649	Poecilia_formosa
ENSACLG00000019304	chd1l	99	79.291	ENSPLAG00000015145	chd1l	98	81.243	Poecilia_latipinna
ENSACLG00000019304	chd1l	96	81.171	ENSPMEG00000008720	chd1l	99	81.427	Poecilia_mexicana
ENSACLG00000019304	chd1l	97	79.863	ENSPREG00000017885	chd1l	98	80.206	Poecilia_reticulata
ENSACLG00000019304	chd1l	97	63.503	ENSPPYG00000000946	CHD1L	98	63.360	Pongo_abelii
ENSACLG00000019304	chd1l	91	58.029	ENSPCAG00000005959	CHD1L	91	58.293	Procavia_capensis
ENSACLG00000019304	chd1l	94	60.585	ENSPVAG00000006084	CHD1L	99	60.895	Pteropus_vampyrus
ENSACLG00000019304	chd1l	96	99.538	ENSPNYG00000013001	chd1l	97	99.538	Pundamilia_nyererei
ENSACLG00000019304	chd1l	98	71.654	ENSPNAG00000011881	chd1l	94	70.217	Pygocentrus_nattereri
ENSACLG00000019304	chd1l	96	64.505	ENSRNOG00000017669	Chd1l	98	64.399	Rattus_norvegicus
ENSACLG00000019304	chd1l	96	63.314	ENSRBIG00000041272	CHD1L	97	63.080	Rhinopithecus_bieti
ENSACLG00000019304	chd1l	95	63.615	ENSRROG00000041354	CHD1L	96	63.520	Rhinopithecus_roxellana
ENSACLG00000019304	chd1l	97	62.159	ENSSHAG00000017395	CHD1L	99	62.247	Sarcophilus_harrisii
ENSACLG00000019304	chd1l	97	71.348	ENSSFOG00015003649	chd1l	98	71.264	Scleropages_formosus
ENSACLG00000019304	chd1l	96	81.335	ENSSMAG00000019377	chd1l	96	81.651	Scophthalmus_maximus
ENSACLG00000019304	chd1l	94	82.864	ENSSDUG00000019831	chd1l	95	83.962	Seriola_dumerili
ENSACLG00000019304	chd1l	94	81.925	ENSSLDG00000012714	chd1l	95	83.765	Seriola_lalandi_dorsalis
ENSACLG00000019304	chd1l	96	62.500	ENSSPUG00000016865	CHD1L	98	62.615	Sphenodon_punctatus
ENSACLG00000019304	chd1l	96	86.452	ENSSPAG00000017653	chd1l	100	86.961	Stegastes_partitus
ENSACLG00000019304	chd1l	97	62.415	ENSSSCG00000006701	CHD1L	98	62.543	Sus_scrofa
ENSACLG00000019304	chd1l	95	62.659	ENSTGUG00000013392	-	100	62.942	Taeniopygia_guttata
ENSACLG00000019304	chd1l	94	69.448	ENSTNIG00000004902	chd1l	99	69.754	Tetraodon_nigroviridis
ENSACLG00000019304	chd1l	95	61.672	ENSTTRG00000011711	CHD1L	99	61.799	Tursiops_truncatus
ENSACLG00000019304	chd1l	97	64.326	ENSUAMG00000021991	CHD1L	97	64.465	Ursus_americanus
ENSACLG00000019304	chd1l	97	64.221	ENSUMAG00000009733	CHD1L	96	65.554	Ursus_maritimus
ENSACLG00000019304	chd1l	98	63.134	ENSVVUG00000007316	CHD1L	93	63.740	Vulpes_vulpes
ENSACLG00000019304	chd1l	96	77.600	ENSXCOG00000008336	chd1l	93	77.182	Xiphophorus_couchianus
ENSACLG00000019304	chd1l	96	81.693	ENSXMAG00000015898	chd1l	94	81.618	Xiphophorus_maculatus