EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000019354 (Gene tree)
Gene ID: 113014328
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 15910 bases
Position: chr22:17573865-17589774
Accession: ZDB-GENE-030131-2074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000028563	PUF	PF00806.19	1.6e-69	1	8
ENSACLP00000028563	PUF	PF00806.19	1.6e-69	2	8
ENSACLP00000028563	PUF	PF00806.19	1.6e-69	3	8
ENSACLP00000028563	PUF	PF00806.19	1.6e-69	4	8
ENSACLP00000028563	PUF	PF00806.19	1.6e-69	5	8
ENSACLP00000028563	PUF	PF00806.19	1.6e-69	6	8
ENSACLP00000028563	PUF	PF00806.19	1.6e-69	7	8
ENSACLP00000028563	PUF	PF00806.19	1.6e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000029235	-	3195	-	ENSACLP00000028563	1064 (aa)	-	-

Gene Model

Click here to download ENSACLG00000019354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000019354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000019354	pum1	100	79.001	ENSG00000134644	PUM1	100	78.439	Homo_sapiens
ENSACLG00000019354	pum1	100	98.967	ENSAPOG00000021632	pum1	92	98.967	Acanthochromis_polyacanthus
ENSACLG00000019354	pum1	100	78.855	ENSAMEG00000017656	PUM1	87	76.596	Ailuropoda_melanoleuca
ENSACLG00000019354	pum1	100	98.779	ENSACIG00000021013	pum1	92	98.779	Amphilophus_citrinellus
ENSACLG00000019354	pum1	100	98.967	ENSAOCG00000003944	pum1	92	98.967	Amphiprion_ocellaris
ENSACLG00000019354	pum1	100	98.967	ENSAPEG00000014550	pum1	92	98.967	Amphiprion_percula
ENSACLG00000019354	pum1	100	98.310	ENSATEG00000016004	pum1	92	98.310	Anabas_testudineus
ENSACLG00000019354	pum1	100	79.575	ENSAPLG00000009351	PUM1	90	77.130	Anas_platyrhynchos
ENSACLG00000019354	pum1	100	78.962	ENSACAG00000000682	PUM1	88	78.499	Anolis_carolinensis
ENSACLG00000019354	pum1	100	78.743	ENSANAG00000027865	PUM1	90	76.481	Aotus_nancymaae
ENSACLG00000019354	pum1	100	83.582	ENSAMXG00000020607	pum1	88	82.929	Astyanax_mexicanus
ENSACLG00000019354	pum1	100	79.001	ENSBTAG00000018979	PUM1	90	76.738	Bos_taurus
ENSACLG00000019354	pum1	100	79.113	ENSCJAG00000006035	PUM1	90	76.759	Callithrix_jacchus
ENSACLG00000019354	pum1	100	78.637	ENSCAFG00020024616	PUM1	95	81.188	Canis_lupus_dingo
ENSACLG00000019354	pum1	100	79.001	ENSCHIG00000012952	PUM1	90	76.738	Capra_hircus
ENSACLG00000019354	pum1	100	78.743	ENSTSYG00000008868	PUM1	89	81.928	Carlito_syrichta
ENSACLG00000019354	pum1	100	78.743	ENSCPOG00000031613	PUM1	90	76.481	Cavia_porcellus
ENSACLG00000019354	pum1	93	91.084	ENSCATG00000017991	PUM1	82	91.566	Cercocebus_atys
ENSACLG00000019354	pum1	100	78.743	ENSCLAG00000007662	PUM1	90	76.481	Chinchilla_lanigera
ENSACLG00000019354	pum1	100	77.768	ENSCSAG00000001028	PUM1	90	75.527	Chlorocebus_sabaeus
ENSACLG00000019354	pum1	92	68.385	ENSCHOG00000010245	PUM1	82	65.459	Choloepus_hoffmanni
ENSACLG00000019354	pum1	100	79.001	ENSCPBG00000009288	PUM1	99	75.603	Chrysemys_picta_bellii
ENSACLG00000019354	pum1	100	79.001	ENSCANG00000042606	PUM1	85	81.064	Colobus_angolensis_palliatus
ENSACLG00000019354	pum1	100	77.963	ENSCGRG00001024949	Pum1	90	77.778	Cricetulus_griseus_chok1gshd
ENSACLG00000019354	pum1	100	77.963	ENSCGRG00000014197	Pum1	90	77.778	Cricetulus_griseus_crigri
ENSACLG00000019354	pum1	100	96.717	ENSCSEG00000015981	pum1	100	96.717	Cynoglossus_semilaevis
ENSACLG00000019354	pum1	100	97.746	ENSCVAG00000007043	pum1	92	97.746	Cyprinodon_variegatus
ENSACLG00000019354	pum1	100	85.182	ENSDARG00000099256	pum1	91	82.183	Danio_rerio
ENSACLG00000019354	pum1	100	79.298	ENSDNOG00000010939	PUM1	90	77.130	Dasypus_novemcinctus
ENSACLG00000019354	pum1	98	72.832	ENSETEG00000004355	PUM1	87	71.139	Echinops_telfairi
ENSACLG00000019354	pum1	100	79.001	ENSEASG00005010813	PUM1	90	76.645	Equus_asinus_asinus
ENSACLG00000019354	pum1	100	78.835	ENSECAG00000021369	PUM1	90	76.481	Equus_caballus
ENSACLG00000019354	pum1	74	90.222	ENSEEUG00000003871	PUM1	64	90.667	Erinaceus_europaeus
ENSACLG00000019354	pum1	100	88.920	ENSELUG00000002409	pum1	92	87.418	Esox_lucius
ENSACLG00000019354	pum1	100	79.020	ENSFCAG00000010374	PUM1	88	80.165	Felis_catus
ENSACLG00000019354	pum1	100	79.117	ENSFALG00000001214	PUM1	87	76.866	Ficedula_albicollis
ENSACLG00000019354	pum1	100	78.743	ENSFDAG00000011319	PUM1	90	76.481	Fukomys_damarensis
ENSACLG00000019354	pum1	100	90.587	ENSGMOG00000010491	pum1	92	90.587	Gadus_morhua
ENSACLG00000019354	pum1	96	90.141	ENSGALG00000042598	PUM1	88	90.141	Gallus_gallus
ENSACLG00000019354	pum1	100	97.746	ENSGAFG00000015617	pum1	92	97.746	Gambusia_affinis
ENSACLG00000019354	pum1	100	96.808	ENSGACG00000005717	pum1	92	96.808	Gasterosteus_aculeatus
ENSACLG00000019354	pum1	96	90.342	ENSGAGG00000001290	PUM1	88	90.342	Gopherus_agassizii
ENSACLG00000019354	pum1	100	79.001	ENSGGOG00000011983	PUM1	90	76.384	Gorilla_gorilla
ENSACLG00000019354	pum1	100	99.906	ENSHBUG00000018718	pum1	92	99.906	Haplochromis_burtoni
ENSACLG00000019354	pum1	100	78.651	ENSHGLG00000013819	Pum1	90	76.389	Heterocephalus_glaber_female
ENSACLG00000019354	pum1	100	78.651	ENSHGLG00100008621	Pum1	90	76.389	Heterocephalus_glaber_male
ENSACLG00000019354	pum1	100	90.516	ENSHCOG00000005149	pum1	100	89.202	Hippocampus_comes
ENSACLG00000019354	pum1	100	82.206	ENSIPUG00000020421	pum1	100	76.386	Ictalurus_punctatus
ENSACLG00000019354	pum1	100	79.001	ENSSTOG00000010757	PUM1	90	76.738	Ictidomys_tridecemlineatus
ENSACLG00000019354	pum1	100	79.001	ENSJJAG00000000530	Pum1	90	76.830	Jaculus_jaculus
ENSACLG00000019354	pum1	100	98.028	ENSKMAG00000003481	pum1	92	98.028	Kryptolebias_marmoratus
ENSACLG00000019354	pum1	100	97.089	ENSLBEG00000002527	pum1	92	97.089	Labrus_bergylta
ENSACLG00000019354	pum1	100	77.952	ENSLACG00000017188	PUM1	89	74.769	Latimeria_chalumnae
ENSACLG00000019354	pum1	100	83.844	ENSLOCG00000005210	pum1	89	82.730	Lepisosteus_oculatus
ENSACLG00000019354	pum1	100	78.928	ENSLAFG00000003178	PUM1	90	76.944	Loxodonta_africana
ENSACLG00000019354	pum1	100	79.001	ENSMFAG00000010291	PUM1	90	76.384	Macaca_fascicularis
ENSACLG00000019354	pum1	100	78.637	ENSMMUG00000013520	PUM1	90	76.384	Macaca_mulatta
ENSACLG00000019354	pum1	100	79.001	ENSMNEG00000034639	PUM1	90	76.738	Macaca_nemestrina
ENSACLG00000019354	pum1	100	79.001	ENSMLEG00000038743	PUM1	85	81.064	Mandrillus_leucophaeus
ENSACLG00000019354	pum1	100	98.122	ENSMAMG00000011606	pum1	100	93.084	Mastacembelus_armatus
ENSACLG00000019354	pum1	100	99.906	ENSMZEG00005005834	pum1	92	99.906	Maylandia_zebra
ENSACLG00000019354	pum1	100	79.741	ENSMGAG00000000724	PUM1	90	77.479	Meleagris_gallopavo
ENSACLG00000019354	pum1	100	78.796	ENSMAUG00000022090	Pum1	90	78.148	Mesocricetus_auratus
ENSACLG00000019354	pum1	100	78.743	ENSMICG00000007713	-	90	76.481	Microcebus_murinus
ENSACLG00000019354	pum1	93	87.740	ENSMICG00000012213	-	89	88.193	Microcebus_murinus
ENSACLG00000019354	pum1	100	78.168	ENSMOCG00000015463	Pum1	90	77.983	Microtus_ochrogaster
ENSACLG00000019354	pum1	93	98.313	ENSMMOG00000019817	pum1	100	72.222	Mola_mola
ENSACLG00000019354	pum1	100	78.743	ENSMODG00000017067	PUM1	89	76.574	Monodelphis_domestica
ENSACLG00000019354	pum1	93	99.036	ENSMALG00000016399	pum1	100	76.787	Monopterus_albus
ENSACLG00000019354	pum1	100	77.798	MGP_CAROLIEiJ_G0026549	Pum1	90	76.367	Mus_caroli
ENSACLG00000019354	pum1	100	77.798	ENSMUSG00000028580	Pum1	90	76.367	Mus_musculus
ENSACLG00000019354	pum1	100	77.706	MGP_PahariEiJ_G0028881	Pum1	90	76.274	Mus_pahari
ENSACLG00000019354	pum1	100	78.353	MGP_SPRETEiJ_G0027529	Pum1	90	76.367	Mus_spretus
ENSACLG00000019354	pum1	100	79.093	ENSMPUG00000015454	PUM1	90	76.645	Mustela_putorius_furo
ENSACLG00000019354	pum1	100	78.835	ENSMLUG00000006490	PUM1	90	76.389	Myotis_lucifugus
ENSACLG00000019354	pum1	100	78.908	ENSNGAG00000002378	Pum1	90	76.645	Nannospalax_galili
ENSACLG00000019354	pum1	75	99.250	ENSNBRG00000010689	pum1	86	99.250	Neolamprologus_brichardi
ENSACLG00000019354	pum1	93	87.470	ENSNLEG00000001151	PUM1	89	87.952	Nomascus_leucogenys
ENSACLG00000019354	pum1	71	78.621	ENSMEUG00000000976	-	56	80.418	Notamacropus_eugenii
ENSACLG00000019354	pum1	80	91.589	ENSOPRG00000001776	PUM1	65	91.589	Ochotona_princeps
ENSACLG00000019354	pum1	100	78.816	ENSODEG00000003465	PUM1	90	76.552	Octodon_degus
ENSACLG00000019354	pum1	100	99.155	ENSONIG00000002290	pum1	92	99.155	Oreochromis_niloticus
ENSACLG00000019354	pum1	93	63.535	ENSOANG00000004902	-	100	61.134	Ornithorhynchus_anatinus
ENSACLG00000019354	pum1	99	78.889	ENSOCUG00000008641	PUM1	89	76.531	Oryctolagus_cuniculus
ENSACLG00000019354	pum1	100	97.474	ENSORLG00000011482	pum1	92	97.474	Oryzias_latipes
ENSACLG00000019354	pum1	100	97.474	ENSORLG00020019461	pum1	92	97.474	Oryzias_latipes_hni
ENSACLG00000019354	pum1	100	97.568	ENSORLG00015011375	pum1	92	97.568	Oryzias_latipes_hsok
ENSACLG00000019354	pum1	95	98.554	ENSOMEG00000009312	pum1	100	74.630	Oryzias_melastigma
ENSACLG00000019354	pum1	100	75.923	ENSOGAG00000011063	PUM1	90	73.660	Otolemur_garnettii
ENSACLG00000019354	pum1	100	78.189	ENSOARG00000001899	PUM1	90	75.926	Ovis_aries
ENSACLG00000019354	pum1	100	79.001	ENSPPAG00000044003	PUM1	90	76.384	Pan_paniscus
ENSACLG00000019354	pum1	100	79.093	ENSPPRG00000001370	PUM1	85	81.188	Panthera_pardus
ENSACLG00000019354	pum1	100	78.908	ENSPTIG00000010798	PUM1	85	81.436	Panthera_tigris_altaica
ENSACLG00000019354	pum1	100	79.001	ENSPTRG00000000453	PUM1	90	76.384	Pan_troglodytes
ENSACLG00000019354	pum1	100	79.001	ENSPANG00000016338	PUM1	90	76.738	Papio_anubis
ENSACLG00000019354	pum1	95	92.530	ENSPKIG00000010578	pum1	90	78.085	Paramormyrops_kingsleyae
ENSACLG00000019354	pum1	100	79.741	ENSPSIG00000014118	PUM1	90	77.201	Pelodiscus_sinensis
ENSACLG00000019354	pum1	75	95.916	ENSPMGG00000005836	pum1	87	95.332	Periophthalmus_magnuspinnatus
ENSACLG00000019354	pum1	100	78.796	ENSPEMG00000010009	Pum1	90	78.148	Peromyscus_maniculatus_bairdii
ENSACLG00000019354	pum1	100	78.743	ENSPCIG00000014151	PUM1	88	80.992	Phascolarctos_cinereus
ENSACLG00000019354	pum1	100	97.191	ENSPFOG00000007289	pum1	99	97.685	Poecilia_formosa
ENSACLG00000019354	pum1	100	94.444	ENSPLAG00000007256	pum1	89	97.778	Poecilia_latipinna
ENSACLG00000019354	pum1	100	97.277	ENSPMEG00000019543	pum1	98	97.277	Poecilia_mexicana
ENSACLG00000019354	pum1	100	97.653	ENSPREG00000005195	pum1	92	97.653	Poecilia_reticulata
ENSACLG00000019354	pum1	100	77.285	ENSPPYG00000001621	PUM1	90	75.068	Pongo_abelii
ENSACLG00000019354	pum1	75	93.210	ENSPCAG00000001979	PUM1	64	93.210	Procavia_capensis
ENSACLG00000019354	pum1	100	78.743	ENSPCOG00000004398	PUM1	90	76.481	Propithecus_coquereli
ENSACLG00000019354	pum1	100	76.944	ENSPVAG00000005207	PUM1	87	74.675	Pteropus_vampyrus
ENSACLG00000019354	pum1	100	99.812	ENSPNYG00000009518	pum1	92	99.812	Pundamilia_nyererei
ENSACLG00000019354	pum1	100	83.582	ENSPNAG00000026728	pum1	91	83.209	Pygocentrus_nattereri
ENSACLG00000019354	pum1	100	77.891	ENSRNOG00000011709	Pum1	90	76.274	Rattus_norvegicus
ENSACLG00000019354	pum1	100	79.001	ENSRBIG00000042521	PUM1	90	76.738	Rhinopithecus_bieti
ENSACLG00000019354	pum1	100	79.001	ENSRROG00000020156	PUM1	90	76.552	Rhinopithecus_roxellana
ENSACLG00000019354	pum1	100	79.020	ENSSBOG00000032037	PUM1	90	76.759	Saimiri_boliviensis_boliviensis
ENSACLG00000019354	pum1	100	78.743	ENSSHAG00000010918	PUM1	89	76.574	Sarcophilus_harrisii
ENSACLG00000019354	pum1	100	96.901	ENSSMAG00000010918	pum1	92	96.901	Scophthalmus_maximus
ENSACLG00000019354	pum1	100	98.779	ENSSDUG00000009021	pum1	92	98.779	Seriola_dumerili
ENSACLG00000019354	pum1	93	98.730	ENSSLDG00000009667	pum1	91	98.730	Seriola_lalandi_dorsalis
ENSACLG00000019354	pum1	93	85.577	ENSSARG00000003055	PUM1	78	82.692	Sorex_araneus
ENSACLG00000019354	pum1	100	79.463	ENSSPUG00000006267	PUM1	90	77.016	Sphenodon_punctatus
ENSACLG00000019354	pum1	100	99.061	ENSSPAG00000016636	pum1	92	99.061	Stegastes_partitus
ENSACLG00000019354	pum1	100	88.934	ENSSSCG00000003591	PUM1	85	89.336	Sus_scrofa
ENSACLG00000019354	pum1	100	97.371	ENSTRUG00000013121	pum1	92	97.371	Takifugu_rubripes
ENSACLG00000019354	pum1	100	97.092	ENSTNIG00000016983	pum1	91	97.092	Tetraodon_nigroviridis
ENSACLG00000019354	pum1	86	90.244	ENSTBEG00000013810	PUM1	78	90.244	Tupaia_belangeri
ENSACLG00000019354	pum1	100	78.908	ENSTTRG00000007436	PUM1	87	76.645	Tursiops_truncatus
ENSACLG00000019354	pum1	98	77.175	ENSUAMG00000018262	-	89	74.667	Ursus_americanus
ENSACLG00000019354	pum1	92	83.704	ENSVPAG00000005902	PUM1	82	81.559	Vicugna_pacos
ENSACLG00000019354	pum1	100	78.928	ENSVVUG00000014631	PUM1	90	76.667	Vulpes_vulpes
ENSACLG00000019354	pum1	100	75.601	ENSXETG00000012904	pum1	89	73.889	Xenopus_tropicalis
ENSACLG00000019354	pum1	100	97.840	ENSXMAG00000002945	pum1	92	97.840	Xiphophorus_maculatus