EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000019371 (Gene tree)
Gene ID: 113026300
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 13501 bases
Position: chr7:43375295-43388795
Accession: 113026300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000028534	YTH	PF04146.15	1.1e-40	1	1
ENSACLP00000028570	YTH	PF04146.15	1.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000029242	-	5264	-	ENSACLP00000028570	683 (aa)	-	-
ENSACLT00000029203	-	6018	-	ENSACLP00000028534	681 (aa)	XP_026030704	UPI00032A0C6A

Gene Model

Click here to download ENSACLG00000019371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000019371's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000019371	ythdc1	59	66.362	ENSG00000083896	YTHDC1	93	50.980	Homo_sapiens
ENSACLG00000019371	ythdc1	83	85.993	ENSAPOG00000013997	ythdc1	93	79.375	Acanthochromis_polyacanthus
ENSACLG00000019371	ythdc1	59	66.133	ENSAMEG00000005688	YTHDC1	57	60.780	Ailuropoda_melanoleuca
ENSACLG00000019371	ythdc1	81	95.070	ENSACIG00000019728	ythdc1	91	84.848	Amphilophus_citrinellus
ENSACLG00000019371	ythdc1	94	91.393	ENSAOCG00000000239	ythdc1	94	91.393	Amphiprion_ocellaris
ENSACLG00000019371	ythdc1	84	90.210	ENSAPEG00000000618	ythdc1	90	90.210	Amphiprion_percula
ENSACLG00000019371	ythdc1	89	87.107	ENSATEG00000023007	ythdc1	92	87.916	Anabas_testudineus
ENSACLG00000019371	ythdc1	92	54.867	ENSAPLG00000009921	YTHDC1	60	60.780	Anas_platyrhynchos
ENSACLG00000019371	ythdc1	94	55.043	ENSACAG00000009697	YTHDC1	58	59.404	Anolis_carolinensis
ENSACLG00000019371	ythdc1	59	66.362	ENSANAG00000001522	YTHDC1	57	59.633	Aotus_nancymaae
ENSACLG00000019371	ythdc1	94	63.609	ENSAMXG00000006978	ythdc1	92	60.090	Astyanax_mexicanus
ENSACLG00000019371	ythdc1	59	65.217	ENSBTAG00000015572	YTHDC1	57	60.092	Bos_taurus
ENSACLG00000019371	ythdc1	59	66.362	ENSCJAG00000009934	YTHDC1	57	59.633	Callithrix_jacchus
ENSACLG00000019371	ythdc1	59	66.133	ENSCAFG00000002821	YTHDC1	57	60.780	Canis_familiaris
ENSACLG00000019371	ythdc1	59	66.133	ENSCAFG00020027112	YTHDC1	57	60.780	Canis_lupus_dingo
ENSACLG00000019371	ythdc1	69	54.286	ENSCHIG00000004810	YTHDC1	54	54.197	Capra_hircus
ENSACLG00000019371	ythdc1	59	66.362	ENSTSYG00000011668	YTHDC1	92	52.117	Carlito_syrichta
ENSACLG00000019371	ythdc1	91	41.755	ENSCAPG00000008722	YTHDC1	68	42.355	Cavia_aperea
ENSACLG00000019371	ythdc1	59	59.039	ENSCPOG00000010929	YTHDC1	92	47.881	Cavia_porcellus
ENSACLG00000019371	ythdc1	59	66.362	ENSCCAG00000035754	YTHDC1	57	59.633	Cebus_capucinus
ENSACLG00000019371	ythdc1	59	66.268	ENSCATG00000036320	YTHDC1	93	53.606	Cercocebus_atys
ENSACLG00000019371	ythdc1	92	54.772	ENSCLAG00000005482	YTHDC1	58	58.333	Chinchilla_lanigera
ENSACLG00000019371	ythdc1	59	66.362	ENSCSAG00000005252	YTHDC1	57	59.633	Chlorocebus_sabaeus
ENSACLG00000019371	ythdc1	93	58.537	ENSCPBG00000021965	YTHDC1	94	51.424	Chrysemys_picta_bellii
ENSACLG00000019371	ythdc1	59	66.362	ENSCANG00000004769	YTHDC1	92	53.411	Colobus_angolensis_palliatus
ENSACLG00000019371	ythdc1	59	66.029	ENSCGRG00001000816	Ythdc1	93	51.825	Cricetulus_griseus_chok1gshd
ENSACLG00000019371	ythdc1	59	66.133	ENSCGRG00000009807	Ythdc1	92	51.479	Cricetulus_griseus_crigri
ENSACLG00000019371	ythdc1	94	83.670	ENSCSEG00000020404	ythdc1	94	83.670	Cynoglossus_semilaevis
ENSACLG00000019371	ythdc1	94	80.751	ENSCVAG00000022349	ythdc1	94	82.031	Cyprinodon_variegatus
ENSACLG00000019371	ythdc1	94	63.470	ENSDARG00000051953	ythdc1	92	59.119	Danio_rerio
ENSACLG00000019371	ythdc1	94	53.824	ENSDNOG00000004949	YTHDC1	57	59.633	Dasypus_novemcinctus
ENSACLG00000019371	ythdc1	59	66.362	ENSDORG00000013045	Ythdc1	58	59.633	Dipodomys_ordii
ENSACLG00000019371	ythdc1	79	65.385	ENSETEG00000001878	YTHDC1	51	82.000	Echinops_telfairi
ENSACLG00000019371	ythdc1	59	66.133	ENSEASG00005018383	YTHDC1	61	60.092	Equus_asinus_asinus
ENSACLG00000019371	ythdc1	92	69.192	ENSECAG00000018303	YTHDC1	78	66.304	Equus_caballus
ENSACLG00000019371	ythdc1	59	65.148	ENSEEUG00000015466	YTHDC1	57	59.404	Erinaceus_europaeus
ENSACLG00000019371	ythdc1	94	60.972	ENSELUG00000014029	ythdc1	92	57.249	Esox_lucius
ENSACLG00000019371	ythdc1	59	66.133	ENSFCAG00000026791	YTHDC1	57	60.780	Felis_catus
ENSACLG00000019371	ythdc1	76	62.882	ENSFALG00000006581	YTHDC1	83	66.576	Ficedula_albicollis
ENSACLG00000019371	ythdc1	59	66.133	ENSFDAG00000018560	YTHDC1	58	59.633	Fukomys_damarensis
ENSACLG00000019371	ythdc1	92	55.387	ENSGALG00000035906	YTHDC1	54	61.687	Gallus_gallus
ENSACLG00000019371	ythdc1	94	71.552	ENSGACG00000015486	ythdc1	94	71.839	Gasterosteus_aculeatus
ENSACLG00000019371	ythdc1	93	58.182	ENSGAGG00000007108	YTHDC1	92	53.949	Gopherus_agassizii
ENSACLG00000019371	ythdc1	59	66.268	ENSGGOG00000021958	YTHDC1	93	53.502	Gorilla_gorilla
ENSACLG00000019371	ythdc1	100	99.854	ENSHBUG00000019288	ythdc1	100	99.854	Haplochromis_burtoni
ENSACLG00000019371	ythdc1	59	66.029	ENSHGLG00000006319	-	58	59.234	Heterocephalus_glaber_female
ENSACLG00000019371	ythdc1	59	64.853	ENSHGLG00100001556	-	58	58.108	Heterocephalus_glaber_male
ENSACLG00000019371	ythdc1	69	79.847	ENSHCOG00000001520	ythdc1	88	76.286	Hippocampus_comes
ENSACLG00000019371	ythdc1	94	63.385	ENSIPUG00000018136	ythdc1	92	60.308	Ictalurus_punctatus
ENSACLG00000019371	ythdc1	59	65.169	ENSSTOG00000013652	YTHDC1	57	58.559	Ictidomys_tridecemlineatus
ENSACLG00000019371	ythdc1	59	65.789	ENSJJAG00000010268	Ythdc1	57	60.482	Jaculus_jaculus
ENSACLG00000019371	ythdc1	60	91.484	ENSKMAG00000006483	ythdc1	87	93.012	Kryptolebias_marmoratus
ENSACLG00000019371	ythdc1	62	78.182	ENSLBEG00000020831	ythdc1	88	97.778	Labrus_bergylta
ENSACLG00000019371	ythdc1	60	63.205	ENSLACG00000004893	YTHDC1	61	60.225	Latimeria_chalumnae
ENSACLG00000019371	ythdc1	94	58.106	ENSLOCG00000003045	ythdc1	87	55.252	Lepisosteus_oculatus
ENSACLG00000019371	ythdc1	94	55.367	ENSLAFG00000021592	YTHDC1	65	64.543	Loxodonta_africana
ENSACLG00000019371	ythdc1	59	66.268	ENSMFAG00000031927	YTHDC1	92	53.411	Macaca_fascicularis
ENSACLG00000019371	ythdc1	59	66.362	ENSMMUG00000002265	YTHDC1	58	59.234	Macaca_mulatta
ENSACLG00000019371	ythdc1	59	66.362	ENSMNEG00000033751	YTHDC1	92	53.411	Macaca_nemestrina
ENSACLG00000019371	ythdc1	59	66.362	ENSMLEG00000042147	YTHDC1	92	53.411	Mandrillus_leucophaeus
ENSACLG00000019371	ythdc1	94	85.139	ENSMAMG00000013122	ythdc1	92	87.578	Mastacembelus_armatus
ENSACLG00000019371	ythdc1	100	100.000	ENSMZEG00005023173	ythdc1	100	100.000	Maylandia_zebra
ENSACLG00000019371	ythdc1	94	55.313	ENSMGAG00000010391	YTHDC1	59	60.321	Meleagris_gallopavo
ENSACLG00000019371	ythdc1	59	66.029	ENSMAUG00000001286	Ythdc1	93	51.679	Mesocricetus_auratus
ENSACLG00000019371	ythdc1	94	54.393	ENSMICG00000034640	YTHDC1	93	52.514	Microcebus_murinus
ENSACLG00000019371	ythdc1	59	66.029	ENSMOCG00000020201	Ythdc1	92	51.906	Microtus_ochrogaster
ENSACLG00000019371	ythdc1	75	81.273	ENSMMOG00000021200	ythdc1	93	73.343	Mola_mola
ENSACLG00000019371	ythdc1	94	56.681	ENSMODG00000020754	-	92	52.471	Monodelphis_domestica
ENSACLG00000019371	ythdc1	97	41.010	ENSMODG00000014337	-	60	60.068	Monodelphis_domestica
ENSACLG00000019371	ythdc1	50	48.857	ENSMODG00000004117	-	74	58.730	Monodelphis_domestica
ENSACLG00000019371	ythdc1	64	44.885	ENSMODG00000009173	-	60	59.091	Monodelphis_domestica
ENSACLG00000019371	ythdc1	84	86.911	ENSMALG00000013412	ythdc1	93	86.420	Monopterus_albus
ENSACLG00000019371	ythdc1	59	66.133	MGP_CAROLIEiJ_G0027347	Ythdc1	93	52.416	Mus_caroli
ENSACLG00000019371	ythdc1	94	55.337	ENSMUSG00000035851	Ythdc1	93	52.703	Mus_musculus
ENSACLG00000019371	ythdc1	94	54.916	MGP_PahariEiJ_G0017126	Ythdc1	93	52.703	Mus_pahari
ENSACLG00000019371	ythdc1	94	54.494	MGP_SPRETEiJ_G0028339	Ythdc1	93	52.703	Mus_spretus
ENSACLG00000019371	ythdc1	75	66.818	ENSMPUG00000001743	YTHDC1	68	65.657	Mustela_putorius_furo
ENSACLG00000019371	ythdc1	59	65.904	ENSMLUG00000016300	YTHDC1	58	59.862	Myotis_lucifugus
ENSACLG00000019371	ythdc1	73	100.000	ENSNBRG00000007663	ythdc1	100	84.968	Neolamprologus_brichardi
ENSACLG00000019371	ythdc1	59	64.270	ENSNLEG00000009202	YTHDC1	92	50.071	Nomascus_leucogenys
ENSACLG00000019371	ythdc1	71	69.159	ENSOPRG00000008986	YTHDC1	54	62.893	Ochotona_princeps
ENSACLG00000019371	ythdc1	92	55.429	ENSODEG00000001715	YTHDC1	57	59.404	Octodon_degus
ENSACLG00000019371	ythdc1	100	99.559	ENSONIG00000012651	ythdc1	100	99.559	Oreochromis_niloticus
ENSACLG00000019371	ythdc1	73	69.173	ENSOCUG00000015886	YTHDC1	63	66.304	Oryctolagus_cuniculus
ENSACLG00000019371	ythdc1	94	82.473	ENSORLG00000030544	ythdc1	95	81.250	Oryzias_latipes
ENSACLG00000019371	ythdc1	94	83.255	ENSORLG00020019316	ythdc1	95	81.847	Oryzias_latipes_hni
ENSACLG00000019371	ythdc1	94	77.984	ENSOMEG00000000551	ythdc1	95	78.173	Oryzias_melastigma
ENSACLG00000019371	ythdc1	59	66.819	ENSOGAG00000003362	YTHDC1	92	51.983	Otolemur_garnettii
ENSACLG00000019371	ythdc1	59	65.217	ENSOARG00000008633	YTHDC1	57	60.092	Ovis_aries
ENSACLG00000019371	ythdc1	59	66.268	ENSPPAG00000041315	YTHDC1	93	50.980	Pan_paniscus
ENSACLG00000019371	ythdc1	59	66.029	ENSPPRG00000011979	YTHDC1	56	60.964	Panthera_pardus
ENSACLG00000019371	ythdc1	59	65.550	ENSPTIG00000015527	YTHDC1	58	59.234	Panthera_tigris_altaica
ENSACLG00000019371	ythdc1	59	66.268	ENSPTRG00000016105	YTHDC1	93	50.980	Pan_troglodytes
ENSACLG00000019371	ythdc1	59	66.268	ENSPANG00000021590	YTHDC1	92	53.502	Papio_anubis
ENSACLG00000019371	ythdc1	94	60.292	ENSPKIG00000018497	ythdc1	59	65.148	Paramormyrops_kingsleyae
ENSACLG00000019371	ythdc1	92	54.692	ENSPSIG00000002782	YTHDC1	92	50.872	Pelodiscus_sinensis
ENSACLG00000019371	ythdc1	57	73.273	ENSPMGG00000000970	-	78	72.072	Periophthalmus_magnuspinnatus
ENSACLG00000019371	ythdc1	59	66.133	ENSPEMG00000013850	Ythdc1	92	51.407	Peromyscus_maniculatus_bairdii
ENSACLG00000019371	ythdc1	94	56.681	ENSPCIG00000006870	YTHDC1	92	52.774	Phascolarctos_cinereus
ENSACLG00000019371	ythdc1	94	79.499	ENSPFOG00000013404	ythdc1	94	81.690	Poecilia_formosa
ENSACLG00000019371	ythdc1	60	87.010	ENSPLAG00000011079	ythdc1	87	87.348	Poecilia_latipinna
ENSACLG00000019371	ythdc1	94	79.812	ENSPMEG00000009238	ythdc1	94	82.003	Poecilia_mexicana
ENSACLG00000019371	ythdc1	94	67.963	ENSPREG00000016973	ythdc1	90	81.362	Poecilia_reticulata
ENSACLG00000019371	ythdc1	59	66.362	ENSPPYG00000014726	YTHDC1	65	59.633	Pongo_abelii
ENSACLG00000019371	ythdc1	94	51.395	ENSPCOG00000019105	YTHDC1	92	49.926	Propithecus_coquereli
ENSACLG00000019371	ythdc1	59	62.929	ENSPVAG00000015551	YTHDC1	56	57.569	Pteropus_vampyrus
ENSACLG00000019371	ythdc1	100	100.000	ENSPNYG00000011687	ythdc1	100	100.000	Pundamilia_nyererei
ENSACLG00000019371	ythdc1	94	64.939	ENSPNAG00000028365	ythdc1	92	60.241	Pygocentrus_nattereri
ENSACLG00000019371	ythdc1	59	64.944	ENSRNOG00000001996	Ythdc1	93	51.464	Rattus_norvegicus
ENSACLG00000019371	ythdc1	59	65.463	ENSRBIG00000028279	YTHDC1	92	53.229	Rhinopithecus_bieti
ENSACLG00000019371	ythdc1	59	66.362	ENSRROG00000035028	YTHDC1	92	53.411	Rhinopithecus_roxellana
ENSACLG00000019371	ythdc1	59	66.268	ENSSBOG00000022353	YTHDC1	92	53.411	Saimiri_boliviensis_boliviensis
ENSACLG00000019371	ythdc1	94	55.947	ENSSHAG00000002538	YTHDC1	92	51.744	Sarcophilus_harrisii
ENSACLG00000019371	ythdc1	94	60.790	ENSSFOG00015003298	ythdc1	59	69.175	Scleropages_formosus
ENSACLG00000019371	ythdc1	94	83.670	ENSSMAG00000009086	ythdc1	94	84.317	Scophthalmus_maximus
ENSACLG00000019371	ythdc1	94	90.994	ENSSDUG00000022008	ythdc1	94	91.615	Seriola_dumerili
ENSACLG00000019371	ythdc1	94	90.994	ENSSLDG00000007926	ythdc1	94	91.615	Seriola_lalandi_dorsalis
ENSACLG00000019371	ythdc1	59	65.446	ENSSARG00000010960	YTHDC1	72	60.092	Sorex_araneus
ENSACLG00000019371	ythdc1	94	55.522	ENSSPUG00000009357	YTHDC1	61	60.092	Sphenodon_punctatus
ENSACLG00000019371	ythdc1	94	90.839	ENSSPAG00000011449	ythdc1	94	91.925	Stegastes_partitus
ENSACLG00000019371	ythdc1	59	66.133	ENSSSCG00000035505	YTHDC1	61	59.685	Sus_scrofa
ENSACLG00000019371	ythdc1	94	54.755	ENSTGUG00000004452	-	59	60.550	Taeniopygia_guttata
ENSACLG00000019371	ythdc1	95	70.634	ENSTRUG00000010142	ythdc1	85	85.000	Takifugu_rubripes
ENSACLG00000019371	ythdc1	96	74.203	ENSTNIG00000013243	ythdc1	91	75.819	Tetraodon_nigroviridis
ENSACLG00000019371	ythdc1	59	64.989	ENSTTRG00000005083	YTHDC1	57	59.633	Tursiops_truncatus
ENSACLG00000019371	ythdc1	59	66.133	ENSUAMG00000010388	YTHDC1	61	60.092	Ursus_americanus
ENSACLG00000019371	ythdc1	92	51.343	ENSUMAG00000013668	YTHDC1	61	51.810	Ursus_maritimus
ENSACLG00000019371	ythdc1	94	53.701	ENSVPAG00000009040	YTHDC1	92	52.269	Vicugna_pacos
ENSACLG00000019371	ythdc1	59	66.133	ENSVVUG00000005387	YTHDC1	61	60.092	Vulpes_vulpes
ENSACLG00000019371	ythdc1	94	57.078	ENSXETG00000017960	ythdc1	57	64.951	Xenopus_tropicalis
ENSACLG00000019371	ythdc1	52	76.415	ENSXCOG00000000530	ythdc1	82	66.667	Xiphophorus_couchianus
ENSACLG00000019371	ythdc1	94	80.908	ENSXMAG00000005196	ythdc1	94	79.782	Xiphophorus_maculatus