EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACLG00000019558 (Gene tree)
Gene ID
113012261
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Astatotilapia_calliptera
Status
putative
Strand
Minus strand
Length
12851 bases
Position
chr19:8572014-8584864
Accession
113012261
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACLP00000028874PABPPF00658.187.4e-3111
ENSACLP00000028874RRM_5PF13893.69.6e-0911
ENSACLP00000028874RRM_1PF00076.226.5e-9014
ENSACLP00000028874RRM_1PF00076.226.5e-9024
ENSACLP00000028874RRM_1PF00076.226.5e-9034
ENSACLP00000028874RRM_1PF00076.226.5e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACLT00000029551-4007-ENSACLP00000028874627 (aa)XP_026008144UPI000329CE30
Gene Model
Click here to download ENSACLG00000019558's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000019558's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACLG00000019558pabpc45137.500ENSACLG00000010181-6137.500
ENSACLG00000019558pabpc45641.429ENSACLG00000002393rbms2a7533.981
ENSACLG00000019558pabpc46033.010ENSACLG00000013048RBMS15633.010
ENSACLG00000019558pabpc49975.987ENSACLG00000014335pabpc1b9975.994
ENSACLG00000019558pabpc46034.940ENSACLG00000002786elavl48434.940
ENSACLG00000019558pabpc48491.304ENSACLG00000009399pabpc1a9791.304
ENSACLG00000019558pabpc45237.500ENSACLG00000013768-5638.372
ENSACLG00000019558pabpc49766.667ENSACLG00000024791pabpc1l9965.984
ENSACLG00000019558pabpc45936.145ENSACLG00000002715ELAVL28536.145
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACLG00000019558pabpc410084.873ENSG00000090621PABPC49996.396Homo_sapiens
ENSACLG00000019558pabpc49997.087ENSAPOG00000001161pabpc410096.810Acanthochromis_polyacanthus
ENSACLG00000019558pabpc49749.596ENSAMEG00000015083-9848.631Ailuropoda_melanoleuca
ENSACLG00000019558pabpc410080.120ENSAMEG00000011535-10079.522Ailuropoda_melanoleuca
ENSACLG00000019558pabpc410097.943ENSACIG00000023343pabpc410097.943Amphilophus_citrinellus
ENSACLG00000019558pabpc410096.651ENSAOCG00000021529pabpc410096.651Amphiprion_ocellaris
ENSACLG00000019558pabpc410096.651ENSAPEG00000019196pabpc410096.651Amphiprion_percula
ENSACLG00000019558pabpc410097.293ENSATEG00000007402pabpc410097.293Anabas_testudineus
ENSACLG00000019558pabpc49985.669ENSAPLG00000009729-10085.039Anas_platyrhynchos
ENSACLG00000019558pabpc49884.929ENSACAG00000002544PABPC410084.220Anolis_carolinensis
ENSACLG00000019558pabpc410083.048ENSANAG00000025079PABPC410082.969Aotus_nancymaae
ENSACLG00000019558pabpc49987.005ENSAMXG00000018779pabpc49987.005Astyanax_mexicanus
ENSACLG00000019558pabpc45884.431ENSBTAG00000048536-9384.431Bos_taurus
ENSACLG00000019558pabpc410081.957ENSBTAG00000017125PABPC410081.346Bos_taurus
ENSACLG00000019558pabpc47480.804ENSCJAG00000045953-8579.018Callithrix_jacchus
ENSACLG00000019558pabpc410083.048ENSCJAG00000002512-10082.969Callithrix_jacchus
ENSACLG00000019558pabpc410083.204ENSCAFG00000003081PABPC410083.125Canis_familiaris
ENSACLG00000019558pabpc410080.269ENSCAFG00020004161PABPC410079.671Canis_lupus_dingo
ENSACLG00000019558pabpc410079.970ENSCHIG00000019398-10079.372Capra_hircus
ENSACLG00000019558pabpc410065.432ENSCHIG00000023385-10064.969Capra_hircus
ENSACLG00000019558pabpc410083.750ENSTSYG00000006532PABPC410083.125Carlito_syrichta
ENSACLG00000019558pabpc49982.866ENSCAPG00000015984PABPC410082.456Cavia_aperea
ENSACLG00000019558pabpc410083.101ENSCPOG00000009552PABPC410083.125Cavia_porcellus
ENSACLG00000019558pabpc410082.893ENSCCAG00000037306PABPC410082.812Cebus_capucinus
ENSACLG00000019558pabpc410083.204ENSCATG00000042164PABPC410083.125Cercocebus_atys
ENSACLG00000019558pabpc410082.946ENSCLAG00000011899PABPC410083.281Chinchilla_lanigera
ENSACLG00000019558pabpc410080.120ENSCSAG00000001135PABPC410079.522Chlorocebus_sabaeus
ENSACLG00000019558pabpc48789.474ENSCHOG00000005327PABPC47990.027Choloepus_hoffmanni
ENSACLG00000019558pabpc49986.457ENSCPBG00000001038PABPC410085.827Chrysemys_picta_bellii
ENSACLG00000019558pabpc49983.438ENSCANG00000034177PABPC410083.360Colobus_angolensis_palliatus
ENSACLG00000019558pabpc49885.366ENSCGRG00001018166Pabpc410084.395Cricetulus_griseus_chok1gshd
ENSACLG00000019558pabpc49785.644ENSCGRG00000009777Pabpc410084.653Cricetulus_griseus_crigri
ENSACLG00000019558pabpc410095.853ENSCSEG00000000130pabpc410095.853Cynoglossus_semilaevis
ENSACLG00000019558pabpc49996.429ENSCVAG00000019246pabpc410096.429Cyprinodon_variegatus
ENSACLG00000019558pabpc49892.982ENSDARG00000059259pabpc410092.727Danio_rerio
ENSACLG00000019558pabpc49982.168ENSDNOG00000018444-10082.074Dasypus_novemcinctus
ENSACLG00000019558pabpc410082.083ENSDORG00000011581Pabpc410081.470Dipodomys_ordii
ENSACLG00000019558pabpc48554.312ENSETEG00000009172-9953.417Echinops_telfairi
ENSACLG00000019558pabpc410090.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSACLG00000019558pabpc49677.236ENSEBUG00000013782pabpc49977.083Eptatretus_burgeri
ENSACLG00000019558pabpc49876.630ENSEBUG00000000992pabpc49976.312Eptatretus_burgeri
ENSACLG00000019558pabpc410080.120ENSEASG00005014119PABPC410079.522Equus_asinus_asinus
ENSACLG00000019558pabpc410080.120ENSECAG00000009396PABPC410079.522Equus_caballus
ENSACLG00000019558pabpc49779.141ENSEEUG00000002962PABPC410078.176Erinaceus_europaeus
ENSACLG00000019558pabpc49892.994ENSELUG00000003195pabpc410092.175Esox_lucius
ENSACLG00000019558pabpc410083.204ENSFCAG00000015254-10083.125Felis_catus
ENSACLG00000019558pabpc49985.423ENSFALG00000000543PABPC410085.804Ficedula_albicollis
ENSACLG00000019558pabpc48852.229ENSFDAG00000010581-9950.000Fukomys_damarensis
ENSACLG00000019558pabpc410079.970ENSFDAG00000020016-10079.372Fukomys_damarensis
ENSACLG00000019558pabpc49996.486ENSFHEG00000007548pabpc410096.486Fundulus_heteroclitus
ENSACLG00000019558pabpc410091.223ENSGMOG00000019025pabpc410091.223Gadus_morhua
ENSACLG00000019558pabpc49986.457ENSGALG00000003800PABPC410085.827Gallus_gallus
ENSACLG00000019558pabpc49997.847ENSGAFG00000018195pabpc410097.847Gambusia_affinis
ENSACLG00000019558pabpc410094.418ENSGACG00000007179pabpc410094.418Gasterosteus_aculeatus
ENSACLG00000019558pabpc49986.614ENSGAGG00000001888PABPC410085.984Gopherus_agassizii
ENSACLG00000019558pabpc410083.048ENSGGOG00000004002PABPC410082.969Gorilla_gorilla
ENSACLG00000019558pabpc410099.841ENSHBUG00000020206pabpc410099.841Haplochromis_burtoni
ENSACLG00000019558pabpc410082.946ENSHGLG00000011162PABPC410082.969Heterocephalus_glaber_female
ENSACLG00000019558pabpc410082.946ENSHGLG00100001580PABPC410082.969Heterocephalus_glaber_male
ENSACLG00000019558pabpc410096.172ENSHCOG00000012694pabpc410096.172Hippocampus_comes
ENSACLG00000019558pabpc49792.742ENSIPUG00000016620pabpc410091.956Ictalurus_punctatus
ENSACLG00000019558pabpc410084.873ENSSTOG00000010416PABPC410084.236Ictidomys_tridecemlineatus
ENSACLG00000019558pabpc410080.982ENSJJAG00000007781Pabpc410080.245Jaculus_jaculus
ENSACLG00000019558pabpc410095.382ENSKMAG00000013597pabpc410095.382Kryptolebias_marmoratus
ENSACLG00000019558pabpc410095.556ENSLBEG00000013654pabpc410095.556Labrus_bergylta
ENSACLG00000019558pabpc49987.264ENSLACG00000011907PABPC410086.792Latimeria_chalumnae
ENSACLG00000019558pabpc49991.969ENSLOCG00000001877pabpc410091.969Lepisosteus_oculatus
ENSACLG00000019558pabpc410085.191ENSLAFG00000000151PABPC410084.554Loxodonta_africana
ENSACLG00000019558pabpc410083.204ENSMFAG00000041481PABPC410083.125Macaca_fascicularis
ENSACLG00000019558pabpc410080.120ENSMMUG00000007497PABPC410079.522Macaca_mulatta
ENSACLG00000019558pabpc410083.204ENSMNEG00000043054PABPC410083.125Macaca_nemestrina
ENSACLG00000019558pabpc410083.204ENSMLEG00000040716PABPC410083.125Mandrillus_leucophaeus
ENSACLG00000019558pabpc410097.289ENSMAMG00000010025pabpc410097.289Mastacembelus_armatus
ENSACLG00000019558pabpc410099.841ENSMZEG00005006141pabpc410099.841Maylandia_zebra
ENSACLG00000019558pabpc49883.615ENSMGAG00000005408PABPC410082.939Meleagris_gallopavo
ENSACLG00000019558pabpc47790.625ENSMAUG00000019763-8487.156Mesocricetus_auratus
ENSACLG00000019558pabpc45880.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSACLG00000019558pabpc47279.048ENSMAUG00000001295-9778.095Mesocricetus_auratus
ENSACLG00000019558pabpc48884.505ENSMICG00000016633-10084.324Microcebus_murinus
ENSACLG00000019558pabpc49975.000ENSMICG00000036729-10073.929Microcebus_murinus
ENSACLG00000019558pabpc410083.968ENSMOCG00000006763Pabpc410083.438Microtus_ochrogaster
ENSACLG00000019558pabpc410092.663ENSMMOG00000002363pabpc410092.823Mola_mola
ENSACLG00000019558pabpc49784.284ENSMODG00000017657-10083.056Monodelphis_domestica
ENSACLG00000019558pabpc46071.733ENSMODG00000018051-9671.733Monodelphis_domestica
ENSACLG00000019558pabpc410097.138ENSMALG00000011017pabpc410097.138Monopterus_albus
ENSACLG00000019558pabpc49970.918MGP_CAROLIEiJ_G0024864-10072.887Mus_caroli
ENSACLG00000019558pabpc410079.372MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSACLG00000019558pabpc410084.554ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSACLG00000019558pabpc49979.848MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSACLG00000019558pabpc49970.588MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSACLG00000019558pabpc410080.120ENSMPUG00000014414-10079.522Mustela_putorius_furo
ENSACLG00000019558pabpc49546.205ENSMPUG00000006836-10045.710Mustela_putorius_furo
ENSACLG00000019558pabpc410084.713ENSMLUG00000012068PABPC410084.076Myotis_lucifugus
ENSACLG00000019558pabpc410085.191ENSNGAG00000018292Pabpc410084.554Nannospalax_galili
ENSACLG00000019558pabpc46099.519ENSNBRG00000009708pabpc49899.519Neolamprologus_brichardi
ENSACLG00000019558pabpc46598.795ENSNBRG00000010047-7298.795Neolamprologus_brichardi
ENSACLG00000019558pabpc410083.204ENSNLEG00000011928PABPC410083.125Nomascus_leucogenys
ENSACLG00000019558pabpc48593.651ENSOPRG00000011984PABPC48693.651Ochotona_princeps
ENSACLG00000019558pabpc45382.857ENSODEG00000013457-10082.857Octodon_degus
ENSACLG00000019558pabpc49973.913ENSODEG00000017434-10073.292Octodon_degus
ENSACLG00000019558pabpc410083.048ENSODEG00000006592-10082.656Octodon_degus
ENSACLG00000019558pabpc410099.522ENSONIG00000008176pabpc410099.522Oreochromis_niloticus
ENSACLG00000019558pabpc49985.827ENSOANG00000010001PABPC410085.197Ornithorhynchus_anatinus
ENSACLG00000019558pabpc49580.534ENSOCUG00000000562PABPC48879.906Oryctolagus_cuniculus
ENSACLG00000019558pabpc49997.222ENSORLG00000017479pabpc49997.222Oryzias_latipes
ENSACLG00000019558pabpc49997.222ENSORLG00020018644pabpc410097.222Oryzias_latipes_hni
ENSACLG00000019558pabpc49997.222ENSORLG00015015042pabpc410097.222Oryzias_latipes_hsok
ENSACLG00000019558pabpc49995.955ENSOMEG00000014410pabpc410095.701Oryzias_melastigma
ENSACLG00000019558pabpc410081.860ENSOGAG00000004067PABPC410080.945Otolemur_garnettii
ENSACLG00000019558pabpc410079.970ENSOARG00000020060PABPC410079.372Ovis_aries
ENSACLG00000019558pabpc410083.048ENSPPAG00000043625PABPC410082.969Pan_paniscus
ENSACLG00000019558pabpc410083.204ENSPPRG00000024727PABPC410083.125Panthera_pardus
ENSACLG00000019558pabpc410083.204ENSPTIG00000005829PABPC410083.125Panthera_tigris_altaica
ENSACLG00000019558pabpc410083.048ENSPTRG00000000573PABPC410082.969Pan_troglodytes
ENSACLG00000019558pabpc410083.204ENSPANG00000009484PABPC410083.125Papio_anubis
ENSACLG00000019558pabpc410090.596ENSPKIG00000025356pabpc410090.596Paramormyrops_kingsleyae
ENSACLG00000019558pabpc49986.772ENSPSIG00000016892PABPC410086.142Pelodiscus_sinensis
ENSACLG00000019558pabpc410092.026ENSPMGG00000009073pabpc410091.228Periophthalmus_magnuspinnatus
ENSACLG00000019558pabpc410079.141ENSPEMG00000024193-10079.814Peromyscus_maniculatus_bairdii
ENSACLG00000019558pabpc410082.636ENSPEMG00000023569-10083.281Peromyscus_maniculatus_bairdii
ENSACLG00000019558pabpc48875.087ENSPMAG00000002836pabpc410075.958Petromyzon_marinus
ENSACLG00000019558pabpc49574.580ENSPMAG00000007885pabpc410073.931Petromyzon_marinus
ENSACLG00000019558pabpc49787.319ENSPCIG00000020674PABPC410095.146Phascolarctos_cinereus
ENSACLG00000019558pabpc49995.847ENSPFOG00000002682pabpc410095.847Poecilia_formosa
ENSACLG00000019558pabpc49996.006ENSPLAG00000010112pabpc410096.006Poecilia_latipinna
ENSACLG00000019558pabpc49995.847ENSPMEG00000019739pabpc410095.847Poecilia_mexicana
ENSACLG00000019558pabpc49996.326ENSPREG00000001589pabpc410096.326Poecilia_reticulata
ENSACLG00000019558pabpc410079.970ENSPPYG00000001506PABPC410079.372Pongo_abelii
ENSACLG00000019558pabpc410075.336ENSPCAG00000003341PABPC410074.738Procavia_capensis
ENSACLG00000019558pabpc410083.075ENSPCOG00000023725-10082.995Propithecus_coquereli
ENSACLG00000019558pabpc49969.444ENSPCOG00000025882-9581.905Propithecus_coquereli
ENSACLG00000019558pabpc49878.974ENSPVAG00000002187PABPC410078.311Pteropus_vampyrus
ENSACLG00000019558pabpc4100100.000ENSPNYG00000006134pabpc4100100.000Pundamilia_nyererei
ENSACLG00000019558pabpc49993.978ENSPNAG00000024355pabpc410093.978Pygocentrus_nattereri
ENSACLG00000019558pabpc410079.786ENSRNOG00000028592AABR07035074.110079.173Rattus_norvegicus
ENSACLG00000019558pabpc410081.930ENSRNOG00000015642Pabpc410081.317Rattus_norvegicus
ENSACLG00000019558pabpc410083.204ENSRBIG00000039761PABPC410083.125Rhinopithecus_bieti
ENSACLG00000019558pabpc410083.204ENSRROG00000033355PABPC410083.125Rhinopithecus_roxellana
ENSACLG00000019558pabpc410082.893ENSSBOG00000026193PABPC410082.812Saimiri_boliviensis_boliviensis
ENSACLG00000019558pabpc49787.319ENSSHAG00000018139PABPC410085.984Sarcophilus_harrisii
ENSACLG00000019558pabpc49991.176ENSSFOG00015023514pabpc410091.176Scleropages_formosus
ENSACLG00000019558pabpc410095.853ENSSMAG00000009007pabpc410095.853Scophthalmus_maximus
ENSACLG00000019558pabpc410096.332ENSSDUG00000012683pabpc410096.332Seriola_dumerili
ENSACLG00000019558pabpc410096.332ENSSLDG00000013025pabpc410096.332Seriola_lalandi_dorsalis
ENSACLG00000019558pabpc410073.842ENSSARG00000000310PABPC410073.244Sorex_araneus
ENSACLG00000019558pabpc49987.122ENSSPUG00000003204PABPC410086.486Sphenodon_punctatus
ENSACLG00000019558pabpc410096.651ENSSPAG00000009252pabpc410096.651Stegastes_partitus
ENSACLG00000019558pabpc410083.204ENSSSCG00000003660-10083.125Sus_scrofa
ENSACLG00000019558pabpc48945.213ENSSSCG00000036170-9645.213Sus_scrofa
ENSACLG00000019558pabpc49981.805ENSTGUG00000001266PABPC410081.955Taeniopygia_guttata
ENSACLG00000019558pabpc410094.577ENSTRUG00000005907pabpc410094.577Takifugu_rubripes
ENSACLG00000019558pabpc410087.937ENSTNIG00000016902pabpc410087.619Tetraodon_nigroviridis
ENSACLG00000019558pabpc49968.874ENSTBEG00000009035PABPC410068.377Tupaia_belangeri
ENSACLG00000019558pabpc49962.524ENSTTRG00000014340PABPC410067.550Tursiops_truncatus
ENSACLG00000019558pabpc410083.204ENSUAMG00000000303PABPC410083.125Ursus_americanus
ENSACLG00000019558pabpc410089.569ENSUMAG00000019585PABPC410092.048Ursus_maritimus
ENSACLG00000019558pabpc47170.796ENSVPAG00000010041PABPC47370.796Vicugna_pacos
ENSACLG00000019558pabpc410083.204ENSVVUG00000005215PABPC410083.125Vulpes_vulpes
ENSACLG00000019558pabpc46796.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSACLG00000019558pabpc49982.992ENSXETG00000010946pabpc410082.362Xenopus_tropicalis
ENSACLG00000019558pabpc49997.361ENSXCOG00000013190pabpc49696.698Xiphophorus_couchianus
ENSACLG00000019558pabpc49996.326ENSXMAG00000019007pabpc410096.326Xiphophorus_maculatus

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