EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000019624 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 864 bases
Position: chr5:29170546-29171409
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000028930	FDF	PF09532.10	2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000029607	-	864	-	ENSACLP00000028930	287 (aa)	-	-

Gene Model

Click here to download ENSACLG00000019624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000019624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000019624	-	100	87.108	ENSACLG00000008384	-	99	90.244
ENSACLG00000019624	-	65	91.623	ENSACLG00000027552	-	66	91.623
ENSACLG00000019624	-	100	97.213	ENSACLG00000011955	-	100	97.213
ENSACLG00000019624	-	61	97.126	ENSACLG00000013004	-	62	97.126

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000019624	-	67	40.201	ENSAPOG00000001780	lsm14b	52	41.951	Acanthochromis_polyacanthus
ENSACLG00000019624	-	69	54.545	ENSACIG00000003147	LSM14B	90	51.220	Amphilophus_citrinellus
ENSACLG00000019624	-	80	56.118	ENSAOCG00000006667	LSM14B	59	56.118	Amphiprion_ocellaris
ENSACLG00000019624	-	67	40.201	ENSAOCG00000012380	lsm14b	52	42.105	Amphiprion_ocellaris
ENSACLG00000019624	-	67	43.814	ENSATEG00000016603	lsm14b	52	45.098	Anabas_testudineus
ENSACLG00000019624	-	77	40.517	ENSBTAG00000021558	LSM14B	54	41.270	Bos_taurus
ENSACLG00000019624	-	84	37.643	ENSTSYG00000031914	LSM14B	66	39.161	Carlito_syrichta
ENSACLG00000019624	-	78	39.916	ENSCAPG00000013059	LSM14B	53	49.398	Cavia_aperea
ENSACLG00000019624	-	78	40.336	ENSCPOG00000038080	LSM14B	53	50.000	Cavia_porcellus
ENSACLG00000019624	-	78	40.336	ENSCLAG00000003186	LSM14B	51	52.564	Chinchilla_lanigera
ENSACLG00000019624	-	50	46.405	ENSCGRG00000002484	-	79	46.591	Cricetulus_griseus_crigri
ENSACLG00000019624	-	71	53.081	ENSCSEG00000020669	LSM14B	54	51.643	Cynoglossus_semilaevis
ENSACLG00000019624	-	68	35.468	ENSETEG00000011188	-	50	48.696	Echinops_telfairi
ENSACLG00000019624	-	70	46.479	ENSELUG00000005780	lsm14b	53	45.540	Esox_lucius
ENSACLG00000019624	-	78	39.496	ENSFDAG00000002214	LSM14B	53	50.000	Fukomys_damarensis
ENSACLG00000019624	-	68	38.350	ENSFHEG00000006237	lsm14b	52	38.278	Fundulus_heteroclitus
ENSACLG00000019624	-	55	59.375	ENSGAFG00000013723	LSM14B	74	59.375	Gambusia_affinis
ENSACLG00000019624	-	77	41.379	ENSGAGG00000004106	LSM14B	63	50.617	Gopherus_agassizii
ENSACLG00000019624	-	84	37.452	ENSGGOG00000005630	LSM14B	53	50.000	Gorilla_gorilla
ENSACLG00000019624	-	79	38.843	ENSHGLG00000015055	LSM14B	53	50.000	Heterocephalus_glaber_female
ENSACLG00000019624	-	79	38.843	ENSHGLG00100015273	LSM14B	54	50.000	Heterocephalus_glaber_male
ENSACLG00000019624	-	79	49.362	ENSHCOG00000018747	LSM14B	59	51.082	Hippocampus_comes
ENSACLG00000019624	-	78	39.496	ENSSTOG00000020482	LSM14B	53	50.000	Ictidomys_tridecemlineatus
ENSACLG00000019624	-	78	39.914	ENSJJAG00000012728	Lsm14b	53	50.602	Jaculus_jaculus
ENSACLG00000019624	-	68	58.794	ENSKMAG00000012834	-	90	59.512	Kryptolebias_marmoratus
ENSACLG00000019624	-	80	54.310	ENSMAMG00000024124	LSM14B	58	54.310	Mastacembelus_armatus
ENSACLG00000019624	-	67	39.109	ENSMAMG00000020539	lsm14b	53	40.191	Mastacembelus_armatus
ENSACLG00000019624	-	60	97.661	ENSMZEG00005009676	-	59	97.661	Maylandia_zebra
ENSACLG00000019624	-	69	84.951	ENSMZEG00005026001	LSM14B	59	83.182	Maylandia_zebra
ENSACLG00000019624	-	100	90.244	ENSMZEG00005026087	-	100	90.592	Maylandia_zebra
ENSACLG00000019624	-	100	90.244	ENSMZEG00005002688	-	100	90.592	Maylandia_zebra
ENSACLG00000019624	-	78	40.171	ENSMAUG00000020700	Lsm14b	53	50.602	Mesocricetus_auratus
ENSACLG00000019624	-	85	38.462	ENSMICG00000014675	LSM14B	58	39.024	Microcebus_murinus
ENSACLG00000019624	-	60	44.199	ENSMOCG00000020600	Lsm14b	53	50.000	Microtus_ochrogaster
ENSACLG00000019624	-	70	39.024	ENSMALG00000004783	lsm14b	50	40.887	Monopterus_albus
ENSACLG00000019624	-	69	61.194	ENSMALG00000022251	LSM14B	53	61.463	Monopterus_albus
ENSACLG00000019624	-	78	39.316	ENSMUSG00000039108	Lsm14b	53	50.000	Mus_musculus
ENSACLG00000019624	-	78	39.916	ENSODEG00000004099	LSM14B	53	50.000	Octodon_degus
ENSACLG00000019624	-	84	49.187	ENSORLG00000028353	LSM14B	66	48.235	Oryzias_latipes
ENSACLG00000019624	-	84	49.593	ENSORLG00015013157	LSM14B	66	48.627	Oryzias_latipes_hsok
ENSACLG00000019624	-	77	41.079	ENSOGAG00000003915	LSM14B	55	41.667	Otolemur_garnettii
ENSACLG00000019624	-	57	45.714	ENSPSIG00000014762	LSM14B	63	46.154	Pelodiscus_sinensis
ENSACLG00000019624	-	70	40.196	ENSPFOG00000005631	lsm14b	53	39.524	Poecilia_formosa
ENSACLG00000019624	-	82	48.333	ENSPLAG00000005793	LSM14B	66	48.016	Poecilia_latipinna
ENSACLG00000019624	-	70	39.706	ENSPLAG00000002449	lsm14b	52	36.019	Poecilia_latipinna
ENSACLG00000019624	-	66	55.440	ENSPMEG00000022953	LSM14B	53	55.610	Poecilia_mexicana
ENSACLG00000019624	-	68	39.086	ENSPMEG00000000745	lsm14b	54	40.284	Poecilia_mexicana
ENSACLG00000019624	-	74	51.389	ENSPREG00000007828	LSM14B	74	51.364	Poecilia_reticulata
ENSACLG00000019624	-	84	37.838	ENSRROG00000042949	LSM14B	53	50.602	Rhinopithecus_roxellana
ENSACLG00000019624	-	85	36.538	ENSSBOG00000032820	LSM14B	51	50.602	Saimiri_boliviensis_boliviensis
ENSACLG00000019624	-	67	38.660	ENSSMAG00000012725	lsm14b	52	42.365	Scophthalmus_maximus
ENSACLG00000019624	-	69	63.366	ENSSDUG00000022770	LSM14B	55	63.768	Seriola_dumerili
ENSACLG00000019624	-	81	51.282	ENSSLDG00000011354	-	81	53.498	Seriola_lalandi_dorsalis
ENSACLG00000019624	-	84	42.213	ENSSPAG00000018854	-	82	41.767	Stegastes_partitus
ENSACLG00000019624	-	53	40.678	ENSSSCG00000026052	LSM14B	54	49.398	Sus_scrofa
ENSACLG00000019624	-	57	45.455	ENSTGUG00000007884	LSM14B	55	45.641	Taeniopygia_guttata
ENSACLG00000019624	-	75	39.631	ENSTRUG00000011354	lsm14b	55	39.171	Takifugu_rubripes
ENSACLG00000019624	-	69	56.281	ENSTRUG00000001529	LSM14B	53	57.843	Takifugu_rubripes
ENSACLG00000019624	-	78	39.056	ENSVVUG00000015920	LSM14B	55	50.299	Vulpes_vulpes
ENSACLG00000019624	-	67	37.563	ENSXMAG00000010013	lsm14b	54	40.187	Xiphophorus_maculatus