EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000019663 (Gene tree)
Gene ID: 113022856
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: protein LSM14 homolog B-B-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 6926 bases
Position: chr5:29207452-29214377
Accession: 113022856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000028995	FDF	PF09532.10	2.7e-08	1	1
ENSACLP00000028995	SM-ATX	PF14438.6	3e-07	1	1
ENSACLP00000028995	LSM14	PF12701.7	2.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000029675	-	6033	-	ENSACLP00000028995	366 (aa)	XP_026024526	UPI000E416EFC

Gene Model

Click here to download ENSACLG00000019663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000019663's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000019663	lsm14b	91	41.470	ENSACLG00000021578	lsm14aa	84	41.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000019663	lsm14b	91	54.696	ENSG00000149657	LSM14B	80	65.556	Homo_sapiens
ENSACLG00000019663	lsm14b	100	82.162	ENSAPOG00000001780	lsm14b	100	82.162	Acanthochromis_polyacanthus
ENSACLG00000019663	lsm14b	92	47.395	ENSAMEG00000013430	LSM14B	91	43.951	Ailuropoda_melanoleuca
ENSACLG00000019663	lsm14b	61	39.592	ENSACIG00000003147	LSM14B	87	35.983	Amphilophus_citrinellus
ENSACLG00000019663	lsm14b	99	82.369	ENSACIG00000012266	lsm14b	99	82.369	Amphilophus_citrinellus
ENSACLG00000019663	lsm14b	100	83.243	ENSAOCG00000012380	lsm14b	100	83.243	Amphiprion_ocellaris
ENSACLG00000019663	lsm14b	93	48.525	ENSAOCG00000006667	LSM14B	89	48.286	Amphiprion_ocellaris
ENSACLG00000019663	lsm14b	100	74.185	ENSAPEG00000023633	lsm14b	100	71.816	Amphiprion_percula
ENSACLG00000019663	lsm14b	100	71.925	ENSATEG00000016603	lsm14b	100	71.390	Anabas_testudineus
ENSACLG00000019663	lsm14b	65	43.929	ENSATEG00000015895	LSM14B	87	42.500	Anabas_testudineus
ENSACLG00000019663	lsm14b	81	45.455	ENSAPLG00000013203	LSM14B	89	43.017	Anas_platyrhynchos
ENSACLG00000019663	lsm14b	99	51.759	ENSACAG00000016195	LSM14B	99	50.758	Anolis_carolinensis
ENSACLG00000019663	lsm14b	92	52.877	ENSANAG00000037915	LSM14B	89	49.459	Aotus_nancymaae
ENSACLG00000019663	lsm14b	90	59.831	ENSAMXG00000002865	lsm14b	90	60.224	Astyanax_mexicanus
ENSACLG00000019663	lsm14b	92	48.139	ENSBTAG00000021558	LSM14B	90	45.185	Bos_taurus
ENSACLG00000019663	lsm14b	92	52.877	ENSCJAG00000014434	LSM14B	89	48.774	Callithrix_jacchus
ENSACLG00000019663	lsm14b	81	44.780	ENSCAFG00000012518	LSM14B	89	42.061	Canis_familiaris
ENSACLG00000019663	lsm14b	92	53.867	ENSCAFG00020022150	LSM14B	89	50.275	Canis_lupus_dingo
ENSACLG00000019663	lsm14b	92	54.121	ENSCHIG00000010284	-	89	50.820	Capra_hircus
ENSACLG00000019663	lsm14b	99	38.710	ENSCHIG00000022681	-	90	38.122	Capra_hircus
ENSACLG00000019663	lsm14b	81	49.691	ENSTSYG00000031914	LSM14B	79	48.137	Carlito_syrichta
ENSACLG00000019663	lsm14b	81	51.692	ENSCAPG00000013059	LSM14B	89	48.598	Cavia_aperea
ENSACLG00000019663	lsm14b	81	51.852	ENSCPOG00000038080	LSM14B	89	48.750	Cavia_porcellus
ENSACLG00000019663	lsm14b	91	37.396	ENSCCAG00000024900	-	74	35.215	Cebus_capucinus
ENSACLG00000019663	lsm14b	92	52.877	ENSCCAG00000021267	LSM14B	89	48.919	Cebus_capucinus
ENSACLG00000019663	lsm14b	91	54.696	ENSCATG00000036006	LSM14B	89	50.681	Cercocebus_atys
ENSACLG00000019663	lsm14b	81	50.617	ENSCLAG00000003186	LSM14B	89	47.335	Chinchilla_lanigera
ENSACLG00000019663	lsm14b	92	48.883	ENSCSAG00000015729	LSM14B	90	46.173	Chlorocebus_sabaeus
ENSACLG00000019663	lsm14b	67	34.672	ENSCHOG00000006997	-	86	31.727	Choloepus_hoffmanni
ENSACLG00000019663	lsm14b	92	48.628	ENSCPBG00000027065	LSM14B	91	46.954	Chrysemys_picta_bellii
ENSACLG00000019663	lsm14b	81	50.309	ENSCANG00000036986	LSM14B	89	45.897	Colobus_angolensis_palliatus
ENSACLG00000019663	lsm14b	92	54.396	ENSCGRG00001018399	Lsm14b	89	50.270	Cricetulus_griseus_chok1gshd
ENSACLG00000019663	lsm14b	60	40.659	ENSCGRG00000006111	-	90	35.034	Cricetulus_griseus_crigri
ENSACLG00000019663	lsm14b	52	43.062	ENSCGRG00000002484	-	78	39.216	Cricetulus_griseus_crigri
ENSACLG00000019663	lsm14b	94	47.123	ENSCSEG00000020669	LSM14B	90	46.067	Cynoglossus_semilaevis
ENSACLG00000019663	lsm14b	99	72.460	ENSCSEG00000004722	lsm14b	99	71.390	Cynoglossus_semilaevis
ENSACLG00000019663	lsm14b	63	36.614	ENSCVAG00000012433	-	89	34.286	Cyprinodon_variegatus
ENSACLG00000019663	lsm14b	99	54.987	ENSDARG00000025386	lsm14b	99	55.297	Danio_rerio
ENSACLG00000019663	lsm14b	60	39.583	ENSDNOG00000025246	LSM14B	88	35.172	Dasypus_novemcinctus
ENSACLG00000019663	lsm14b	81	50.152	ENSDORG00000016683	Lsm14b	78	47.077	Dipodomys_ordii
ENSACLG00000019663	lsm14b	93	43.869	ENSETEG00000001869	-	90	42.897	Echinops_telfairi
ENSACLG00000019663	lsm14b	57	39.167	ENSETEG00000011188	-	99	36.626	Echinops_telfairi
ENSACLG00000019663	lsm14b	60	45.041	ENSEASG00005023218	LSM14B	85	41.772	Equus_asinus_asinus
ENSACLG00000019663	lsm14b	92	54.396	ENSECAG00000010659	LSM14B	89	50.820	Equus_caballus
ENSACLG00000019663	lsm14b	90	53.602	ENSELUG00000016299	LSM14B	90	53.314	Esox_lucius
ENSACLG00000019663	lsm14b	99	61.518	ENSELUG00000005780	lsm14b	99	58.115	Esox_lucius
ENSACLG00000019663	lsm14b	92	54.121	ENSFCAG00000003248	LSM14B	89	50.546	Felis_catus
ENSACLG00000019663	lsm14b	81	44.565	ENSFALG00000010618	LSM14B	90	41.555	Ficedula_albicollis
ENSACLG00000019663	lsm14b	81	50.462	ENSFDAG00000002214	LSM14B	89	46.541	Fukomys_damarensis
ENSACLG00000019663	lsm14b	72	50.182	ENSFHEG00000003362	LSM14B	69	50.182	Fundulus_heteroclitus
ENSACLG00000019663	lsm14b	100	72.581	ENSFHEG00000006237	lsm14b	100	72.581	Fundulus_heteroclitus
ENSACLG00000019663	lsm14b	99	66.398	ENSGMOG00000017115	lsm14b	99	62.366	Gadus_morhua
ENSACLG00000019663	lsm14b	92	50.811	ENSGALG00000005125	LSM14B	90	49.462	Gallus_gallus
ENSACLG00000019663	lsm14b	100	67.560	ENSGAFG00000020318	lsm14b	100	67.560	Gambusia_affinis
ENSACLG00000019663	lsm14b	65	41.200	ENSGAFG00000013723	LSM14B	85	40.000	Gambusia_affinis
ENSACLG00000019663	lsm14b	99	72.267	ENSGACG00000009973	lsm14b	99	72.267	Gasterosteus_aculeatus
ENSACLG00000019663	lsm14b	59	41.102	ENSGAGG00000004106	LSM14B	80	40.000	Gopherus_agassizii
ENSACLG00000019663	lsm14b	82	50.303	ENSGGOG00000005630	LSM14B	85	45.970	Gorilla_gorilla
ENSACLG00000019663	lsm14b	92	53.846	ENSHGLG00000015055	LSM14B	89	50.273	Heterocephalus_glaber_female
ENSACLG00000019663	lsm14b	81	50.000	ENSHGLG00100015273	LSM14B	89	47.319	Heterocephalus_glaber_male
ENSACLG00000019663	lsm14b	94	49.036	ENSHCOG00000018747	LSM14B	90	48.116	Hippocampus_comes
ENSACLG00000019663	lsm14b	68	54.054	ENSHCOG00000004867	lsm14b	100	52.713	Hippocampus_comes
ENSACLG00000019663	lsm14b	90	59.664	ENSIPUG00000014946	lsm14b	94	61.069	Ictalurus_punctatus
ENSACLG00000019663	lsm14b	81	50.617	ENSSTOG00000020482	LSM14B	89	47.335	Ictidomys_tridecemlineatus
ENSACLG00000019663	lsm14b	91	53.804	ENSJJAG00000012728	Lsm14b	89	50.409	Jaculus_jaculus
ENSACLG00000019663	lsm14b	52	36.449	ENSKMAG00000012834	-	86	42.424	Kryptolebias_marmoratus
ENSACLG00000019663	lsm14b	100	72.162	ENSKMAG00000017524	lsm14b	100	72.162	Kryptolebias_marmoratus
ENSACLG00000019663	lsm14b	65	41.667	ENSLBEG00000007951	LSM14B	85	36.957	Labrus_bergylta
ENSACLG00000019663	lsm14b	91	48.010	ENSLACG00000003849	LSM14B	91	47.727	Latimeria_chalumnae
ENSACLG00000019663	lsm14b	99	57.732	ENSLOCG00000003746	lsm14b	99	57.474	Lepisosteus_oculatus
ENSACLG00000019663	lsm14b	82	47.892	ENSLAFG00000007492	LSM14B	89	44.940	Loxodonta_africana
ENSACLG00000019663	lsm14b	91	54.420	ENSMFAG00000041479	LSM14B	89	50.409	Macaca_fascicularis
ENSACLG00000019663	lsm14b	91	54.420	ENSMMUG00000014084	LSM14B	89	50.409	Macaca_mulatta
ENSACLG00000019663	lsm14b	91	54.420	ENSMNEG00000045573	LSM14B	89	50.409	Macaca_nemestrina
ENSACLG00000019663	lsm14b	81	51.235	ENSMLEG00000040895	LSM14B	89	46.505	Mandrillus_leucophaeus
ENSACLG00000019663	lsm14b	100	75.668	ENSMAMG00000020539	lsm14b	100	75.668	Mastacembelus_armatus
ENSACLG00000019663	lsm14b	95	52.329	ENSMAMG00000024124	LSM14B	89	52.047	Mastacembelus_armatus
ENSACLG00000019663	lsm14b	100	99.454	ENSMZEG00005000987	lsm14b	100	99.454	Maylandia_zebra
ENSACLG00000019663	lsm14b	91	48.199	ENSMZEG00005026001	LSM14B	93	49.153	Maylandia_zebra
ENSACLG00000019663	lsm14b	82	46.687	ENSMGAG00000005300	LSM14B	89	46.313	Meleagris_gallopavo
ENSACLG00000019663	lsm14b	92	54.294	ENSMAUG00000020700	Lsm14b	89	49.731	Mesocricetus_auratus
ENSACLG00000019663	lsm14b	92	53.533	ENSMICG00000014675	LSM14B	66	73.188	Microcebus_murinus
ENSACLG00000019663	lsm14b	92	52.011	ENSMOCG00000020600	Lsm14b	89	50.272	Microtus_ochrogaster
ENSACLG00000019663	lsm14b	61	40.370	ENSMOCG00000005119	-	91	34.783	Microtus_ochrogaster
ENSACLG00000019663	lsm14b	90	50.000	ENSMMOG00000017321	LSM14B	89	46.991	Mola_mola
ENSACLG00000019663	lsm14b	90	68.079	ENSMMOG00000020042	lsm14b	93	68.079	Mola_mola
ENSACLG00000019663	lsm14b	60	40.702	ENSMODG00000016690	LSM14B	88	37.857	Monodelphis_domestica
ENSACLG00000019663	lsm14b	91	45.304	ENSMALG00000022251	LSM14B	89	48.424	Monopterus_albus
ENSACLG00000019663	lsm14b	99	75.616	ENSMALG00000004783	lsm14b	96	76.022	Monopterus_albus
ENSACLG00000019663	lsm14b	92	54.396	MGP_CAROLIEiJ_G0024770	Lsm14b	89	50.811	Mus_caroli
ENSACLG00000019663	lsm14b	92	54.396	ENSMUSG00000039108	Lsm14b	89	50.811	Mus_musculus
ENSACLG00000019663	lsm14b	92	54.396	MGP_PahariEiJ_G0026214	Lsm14b	89	50.811	Mus_pahari
ENSACLG00000019663	lsm14b	92	54.396	MGP_SPRETEiJ_G0025693	Lsm14b	89	50.811	Mus_spretus
ENSACLG00000019663	lsm14b	86	43.570	ENSMPUG00000007584	LSM14B	91	40.957	Mustela_putorius_furo
ENSACLG00000019663	lsm14b	90	53.352	ENSMLUG00000000304	LSM14B	89	50.137	Myotis_lucifugus
ENSACLG00000019663	lsm14b	81	50.617	ENSNLEG00000015757	LSM14B	89	45.897	Nomascus_leucogenys
ENSACLG00000019663	lsm14b	66	72.143	ENSMEUG00000008267	-	63	73.188	Notamacropus_eugenii
ENSACLG00000019663	lsm14b	92	54.121	ENSODEG00000004099	LSM14B	89	50.546	Octodon_degus
ENSACLG00000019663	lsm14b	100	96.730	ENSONIG00000020318	lsm14b	100	96.730	Oreochromis_niloticus
ENSACLG00000019663	lsm14b	72	54.851	ENSOANG00000003370	LSM14B	91	53.558	Ornithorhynchus_anatinus
ENSACLG00000019663	lsm14b	81	50.464	ENSOCUG00000006279	LSM14B	89	47.003	Oryctolagus_cuniculus
ENSACLG00000019663	lsm14b	93	46.927	ENSORLG00000028353	LSM14B	91	46.264	Oryzias_latipes
ENSACLG00000019663	lsm14b	100	74.054	ENSORLG00000013525	lsm14b	100	75.946	Oryzias_latipes
ENSACLG00000019663	lsm14b	62	34.118	ENSORLG00020018191	-	85	32.530	Oryzias_latipes_hni
ENSACLG00000019663	lsm14b	100	74.054	ENSORLG00020020553	lsm14b	100	75.946	Oryzias_latipes_hni
ENSACLG00000019663	lsm14b	93	46.927	ENSORLG00015013157	LSM14B	91	46.264	Oryzias_latipes_hsok
ENSACLG00000019663	lsm14b	100	74.054	ENSORLG00015016862	lsm14b	100	75.946	Oryzias_latipes_hsok
ENSACLG00000019663	lsm14b	63	38.912	ENSOMEG00000000171	-	83	35.586	Oryzias_melastigma
ENSACLG00000019663	lsm14b	100	73.514	ENSOMEG00000023917	lsm14b	100	75.405	Oryzias_melastigma
ENSACLG00000019663	lsm14b	92	47.891	ENSOGAG00000003915	LSM14B	90	45.567	Otolemur_garnettii
ENSACLG00000019663	lsm14b	83	44.474	ENSOARG00000014706	LSM14B	88	41.576	Ovis_aries
ENSACLG00000019663	lsm14b	82	50.303	ENSPPAG00000035799	LSM14B	85	45.970	Pan_paniscus
ENSACLG00000019663	lsm14b	92	54.396	ENSPPRG00000009197	LSM14B	89	50.820	Panthera_pardus
ENSACLG00000019663	lsm14b	60	43.673	ENSPTIG00000021518	LSM14B	88	40.417	Panthera_tigris_altaica
ENSACLG00000019663	lsm14b	91	54.696	ENSPTRG00000013696	LSM14B	89	50.681	Pan_troglodytes
ENSACLG00000019663	lsm14b	91	54.420	ENSPANG00000011747	LSM14B	89	50.409	Papio_anubis
ENSACLG00000019663	lsm14b	91	61.714	ENSPKIG00000003275	lsm14b	85	83.696	Paramormyrops_kingsleyae
ENSACLG00000019663	lsm14b	81	52.632	ENSPSIG00000014762	LSM14B	89	49.686	Pelodiscus_sinensis
ENSACLG00000019663	lsm14b	91	54.144	ENSPEMG00000017688	Lsm14b	90	50.270	Peromyscus_maniculatus_bairdii
ENSACLG00000019663	lsm14b	92	55.402	ENSPCIG00000013405	LSM14B	89	51.791	Phascolarctos_cinereus
ENSACLG00000019663	lsm14b	100	70.620	ENSPFOG00000005631	lsm14b	100	70.620	Poecilia_formosa
ENSACLG00000019663	lsm14b	100	70.081	ENSPLAG00000002449	lsm14b	100	70.081	Poecilia_latipinna
ENSACLG00000019663	lsm14b	90	47.839	ENSPLAG00000005793	LSM14B	90	47.059	Poecilia_latipinna
ENSACLG00000019663	lsm14b	100	70.889	ENSPMEG00000000745	lsm14b	100	70.889	Poecilia_mexicana
ENSACLG00000019663	lsm14b	90	47.701	ENSPMEG00000022953	LSM14B	90	48.387	Poecilia_mexicana
ENSACLG00000019663	lsm14b	61	37.349	ENSPREG00000007828	LSM14B	85	37.344	Poecilia_reticulata
ENSACLG00000019663	lsm14b	92	49.591	ENSPPYG00000011194	LSM14B	89	48.056	Pongo_abelii
ENSACLG00000019663	lsm14b	92	53.846	ENSPCOG00000013625	LSM14B	89	50.273	Propithecus_coquereli
ENSACLG00000019663	lsm14b	72	42.561	ENSPVAG00000017918	LSM14B	100	39.514	Pteropus_vampyrus
ENSACLG00000019663	lsm14b	90	60.458	ENSPNAG00000012777	lsm14b	90	60.458	Pygocentrus_nattereri
ENSACLG00000019663	lsm14b	92	49.257	ENSRNOG00000054557	Lsm14b	90	46.078	Rattus_norvegicus
ENSACLG00000019663	lsm14b	81	50.154	ENSRBIG00000033461	LSM14B	88	45.758	Rhinopithecus_bieti
ENSACLG00000019663	lsm14b	83	51.360	ENSRROG00000042949	LSM14B	81	47.024	Rhinopithecus_roxellana
ENSACLG00000019663	lsm14b	81	49.249	ENSSBOG00000032820	LSM14B	89	45.732	Saimiri_boliviensis_boliviensis
ENSACLG00000019663	lsm14b	81	52.469	ENSSHAG00000015528	LSM14B	86	48.171	Sarcophilus_harrisii
ENSACLG00000019663	lsm14b	90	61.782	ENSSFOG00015004627	lsm14b	91	61.782	Scleropages_formosus
ENSACLG00000019663	lsm14b	97	47.949	ENSSMAG00000000135	LSM14B	91	46.322	Scophthalmus_maximus
ENSACLG00000019663	lsm14b	100	78.457	ENSSMAG00000012725	lsm14b	100	78.515	Scophthalmus_maximus
ENSACLG00000019663	lsm14b	100	80.214	ENSSDUG00000020977	lsm14b	100	80.214	Seriola_dumerili
ENSACLG00000019663	lsm14b	91	53.276	ENSSDUG00000022770	LSM14B	89	52.326	Seriola_dumerili
ENSACLG00000019663	lsm14b	61	44.223	ENSSLDG00000011354	-	87	37.358	Seriola_lalandi_dorsalis
ENSACLG00000019663	lsm14b	51	40.376	ENSSARG00000007749	-	96	36.818	Sorex_araneus
ENSACLG00000019663	lsm14b	92	48.387	ENSSPUG00000014360	LSM14B	96	48.870	Sphenodon_punctatus
ENSACLG00000019663	lsm14b	66	38.235	ENSSPAG00000018854	-	86	32.114	Stegastes_partitus
ENSACLG00000019663	lsm14b	100	78.533	ENSSPAG00000020915	lsm14b	100	78.261	Stegastes_partitus
ENSACLG00000019663	lsm14b	91	54.875	ENSSSCG00000026052	LSM14B	88	38.129	Sus_scrofa
ENSACLG00000019663	lsm14b	81	49.544	ENSTGUG00000007884	LSM14B	89	45.373	Taeniopygia_guttata
ENSACLG00000019663	lsm14b	100	74.194	ENSTRUG00000011354	lsm14b	100	74.194	Takifugu_rubripes
ENSACLG00000019663	lsm14b	91	51.685	ENSTRUG00000001529	LSM14B	90	51.003	Takifugu_rubripes
ENSACLG00000019663	lsm14b	100	65.903	ENSTNIG00000002445	lsm14b	100	65.903	Tetraodon_nigroviridis
ENSACLG00000019663	lsm14b	74	82.051	ENSTTRG00000011043	LSM14B	89	35.772	Tursiops_truncatus
ENSACLG00000019663	lsm14b	90	47.472	ENSUAMG00000025298	LSM14B	89	43.611	Ursus_americanus
ENSACLG00000019663	lsm14b	90	47.472	ENSUMAG00000000480	LSM14B	89	43.611	Ursus_maritimus
ENSACLG00000019663	lsm14b	81	50.462	ENSVVUG00000015920	LSM14B	88	48.125	Vulpes_vulpes
ENSACLG00000019663	lsm14b	86	53.488	ENSXETG00000001997	lsm14b	99	50.000	Xenopus_tropicalis
ENSACLG00000019663	lsm14b	100	70.541	ENSXMAG00000010013	lsm14b	100	70.541	Xiphophorus_maculatus