EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000019800 (Gene tree)
Gene ID: 113020220
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 9658 bases
Position: chr4:2575101-2584758
Accession: 113020220
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000029218	tRNA_int_end_N2	PF12928.7	5.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000029904	-	4612	-	ENSACLP00000029218	512 (aa)	XP_026019775	UPI000E406A88
ENSACLT00000029879	-	4701	-	ENSACLP00000029193	463 (aa)	-	-

Gene Model

Click here to download ENSACLG00000019800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000019800's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000019800	tsen54	96	46.139	ENSG00000182173	TSEN54	100	66.667	Homo_sapiens
ENSACLG00000019800	tsen54	100	78.723	ENSAPOG00000009659	tsen54	100	77.512	Acanthochromis_polyacanthus
ENSACLG00000019800	tsen54	96	44.487	ENSAMEG00000009414	TSEN54	96	44.747	Ailuropoda_melanoleuca
ENSACLG00000019800	tsen54	100	79.884	ENSAOCG00000000152	tsen54	98	79.884	Amphiprion_ocellaris
ENSACLG00000019800	tsen54	100	78.917	ENSAPEG00000018931	tsen54	98	79.497	Amphiprion_percula
ENSACLG00000019800	tsen54	100	74.060	ENSATEG00000019860	tsen54	100	74.812	Anabas_testudineus
ENSACLG00000019800	tsen54	86	45.969	ENSAPLG00000009419	TSEN54	99	45.259	Anas_platyrhynchos
ENSACLG00000019800	tsen54	97	45.785	ENSACAG00000006714	TSEN54	98	46.023	Anolis_carolinensis
ENSACLG00000019800	tsen54	96	45.825	ENSANAG00000024061	TSEN54	96	46.243	Aotus_nancymaae
ENSACLG00000019800	tsen54	97	58.218	ENSAMXG00000006546	tsen54	97	58.648	Astyanax_mexicanus
ENSACLG00000019800	tsen54	96	44.381	ENSBTAG00000000824	TSEN54	97	44.834	Bos_taurus
ENSACLG00000019800	tsen54	96	45.243	ENSCJAG00000014278	TSEN54	96	45.857	Callithrix_jacchus
ENSACLG00000019800	tsen54	96	45.000	ENSCAFG00000004798	TSEN54	97	45.155	Canis_familiaris
ENSACLG00000019800	tsen54	96	45.000	ENSCAFG00020000312	TSEN54	97	45.155	Canis_lupus_dingo
ENSACLG00000019800	tsen54	96	44.722	ENSCHIG00000019908	TSEN54	97	44.574	Capra_hircus
ENSACLG00000019800	tsen54	86	44.589	ENSTSYG00000037439	TSEN54	99	44.805	Carlito_syrichta
ENSACLG00000019800	tsen54	96	46.050	ENSCCAG00000036624	TSEN54	96	45.857	Cebus_capucinus
ENSACLG00000019800	tsen54	96	46.435	ENSCATG00000042877	TSEN54	96	46.360	Cercocebus_atys
ENSACLG00000019800	tsen54	96	45.315	ENSCLAG00000002924	TSEN54	96	45.315	Chinchilla_lanigera
ENSACLG00000019800	tsen54	96	46.332	ENSCSAG00000004809	TSEN54	97	46.552	Chlorocebus_sabaeus
ENSACLG00000019800	tsen54	97	47.297	ENSCPBG00000028071	TSEN54	98	47.269	Chrysemys_picta_bellii
ENSACLG00000019800	tsen54	96	46.435	ENSCANG00000028053	TSEN54	92	53.757	Colobus_angolensis_palliatus
ENSACLG00000019800	tsen54	96	44.788	ENSCGRG00001020029	Tsen54	97	44.788	Cricetulus_griseus_chok1gshd
ENSACLG00000019800	tsen54	84	42.794	ENSCGRG00000016289	Tsen54	99	42.794	Cricetulus_griseus_crigri
ENSACLG00000019800	tsen54	80	56.368	ENSCSEG00000020586	tsen54	99	56.368	Cynoglossus_semilaevis
ENSACLG00000019800	tsen54	80	55.529	ENSDARG00000036844	tsen54	100	56.145	Danio_rerio
ENSACLG00000019800	tsen54	96	44.359	ENSDNOG00000018452	TSEN54	97	45.124	Dasypus_novemcinctus
ENSACLG00000019800	tsen54	96	46.471	ENSDORG00000004073	Tsen54	97	46.471	Dipodomys_ordii
ENSACLG00000019800	tsen54	96	31.407	ENSEBUG00000005203	TSEN54	95	32.115	Eptatretus_burgeri
ENSACLG00000019800	tsen54	96	45.243	ENSEASG00005000579	TSEN54	97	45.243	Equus_asinus_asinus
ENSACLG00000019800	tsen54	96	45.243	ENSECAG00000004924	TSEN54	97	45.243	Equus_caballus
ENSACLG00000019800	tsen54	86	43.601	ENSEEUG00000008467	TSEN54	99	43.167	Erinaceus_europaeus
ENSACLG00000019800	tsen54	99	59.480	ENSELUG00000017703	tsen54	92	58.748	Esox_lucius
ENSACLG00000019800	tsen54	96	45.192	ENSFCAG00000023712	TSEN54	97	45.714	Felis_catus
ENSACLG00000019800	tsen54	93	45.842	ENSFALG00000001119	TSEN54	92	46.029	Ficedula_albicollis
ENSACLG00000019800	tsen54	86	43.844	ENSFDAG00000019090	TSEN54	99	43.413	Fukomys_damarensis
ENSACLG00000019800	tsen54	100	71.760	ENSFHEG00000005470	tsen54	100	71.760	Fundulus_heteroclitus
ENSACLG00000019800	tsen54	83	57.360	ENSGMOG00000013146	tsen54	99	57.360	Gadus_morhua
ENSACLG00000019800	tsen54	93	42.942	ENSGALG00000047163	TSEN54	96	42.430	Gallus_gallus
ENSACLG00000019800	tsen54	100	67.754	ENSGAFG00000005111	tsen54	100	67.754	Gambusia_affinis
ENSACLG00000019800	tsen54	96	65.408	ENSGACG00000014987	tsen54	100	64.811	Gasterosteus_aculeatus
ENSACLG00000019800	tsen54	97	47.297	ENSGAGG00000006825	TSEN54	96	47.280	Gopherus_agassizii
ENSACLG00000019800	tsen54	96	46.318	ENSGGOG00000009417	TSEN54	99	46.615	Gorilla_gorilla
ENSACLG00000019800	tsen54	90	98.701	ENSHBUG00000018296	tsen54	92	98.701	Haplochromis_burtoni
ENSACLG00000019800	tsen54	96	46.272	ENSHGLG00000007979	TSEN54	97	45.731	Heterocephalus_glaber_female
ENSACLG00000019800	tsen54	96	45.315	ENSHGLG00100005497	TSEN54	97	44.782	Heterocephalus_glaber_male
ENSACLG00000019800	tsen54	81	63.679	ENSHCOG00000007481	tsen54	100	63.915	Hippocampus_comes
ENSACLG00000019800	tsen54	97	52.539	ENSIPUG00000000590	tsen54	97	51.953	Ictalurus_punctatus
ENSACLG00000019800	tsen54	96	44.802	ENSSTOG00000012883	TSEN54	97	45.211	Ictidomys_tridecemlineatus
ENSACLG00000019800	tsen54	96	45.665	ENSJJAG00000007365	Tsen54	97	45.665	Jaculus_jaculus
ENSACLG00000019800	tsen54	100	69.850	ENSKMAG00000006944	tsen54	100	69.850	Kryptolebias_marmoratus
ENSACLG00000019800	tsen54	100	70.532	ENSLBEG00000004199	tsen54	100	70.342	Labrus_bergylta
ENSACLG00000019800	tsen54	96	43.378	ENSLACG00000009497	TSEN54	99	42.610	Latimeria_chalumnae
ENSACLG00000019800	tsen54	99	55.805	ENSLOCG00000011191	tsen54	99	55.268	Lepisosteus_oculatus
ENSACLG00000019800	tsen54	92	44.694	ENSLAFG00000011655	TSEN54	92	44.856	Loxodonta_africana
ENSACLG00000019800	tsen54	96	46.332	ENSMFAG00000000712	TSEN54	89	55.556	Macaca_fascicularis
ENSACLG00000019800	tsen54	96	46.332	ENSMNEG00000029199	TSEN54	89	55.556	Macaca_nemestrina
ENSACLG00000019800	tsen54	86	44.565	ENSMLEG00000044168	TSEN54	88	44.685	Mandrillus_leucophaeus
ENSACLG00000019800	tsen54	100	74.427	ENSMAMG00000019773	tsen54	100	74.427	Mastacembelus_armatus
ENSACLG00000019800	tsen54	100	99.609	ENSMZEG00005000884	tsen54	100	99.609	Maylandia_zebra
ENSACLG00000019800	tsen54	93	42.970	ENSMGAG00000009556	TSEN54	92	43.800	Meleagris_gallopavo
ENSACLG00000019800	tsen54	96	45.124	ENSMAUG00000016838	Tsen54	97	44.788	Mesocricetus_auratus
ENSACLG00000019800	tsen54	96	46.548	ENSMICG00000044012	TSEN54	96	47.723	Microcebus_murinus
ENSACLG00000019800	tsen54	96	45.962	ENSMOCG00000021585	Tsen54	97	45.192	Microtus_ochrogaster
ENSACLG00000019800	tsen54	96	65.392	ENSMMOG00000020189	tsen54	99	67.203	Mola_mola
ENSACLG00000019800	tsen54	96	43.985	ENSMODG00000007438	TSEN54	95	43.879	Monodelphis_domestica
ENSACLG00000019800	tsen54	99	74.335	ENSMALG00000020573	tsen54	99	74.905	Monopterus_albus
ENSACLG00000019800	tsen54	96	45.665	MGP_CAROLIEiJ_G0017417	Tsen54	97	45.665	Mus_caroli
ENSACLG00000019800	tsen54	96	46.065	ENSMUSG00000020781	Tsen54	97	46.050	Mus_musculus
ENSACLG00000019800	tsen54	96	46.958	MGP_PahariEiJ_G0018547	Tsen54	97	46.516	Mus_pahari
ENSACLG00000019800	tsen54	96	45.873	MGP_SPRETEiJ_G0018262	Tsen54	97	45.665	Mus_spretus
ENSACLG00000019800	tsen54	96	43.182	ENSMPUG00000013870	TSEN54	97	43.939	Mustela_putorius_furo
ENSACLG00000019800	tsen54	96	42.389	ENSMLUG00000015298	TSEN54	96	44.600	Myotis_lucifugus
ENSACLG00000019800	tsen54	96	45.648	ENSNGAG00000015673	Tsen54	97	45.261	Nannospalax_galili
ENSACLG00000019800	tsen54	88	41.176	ENSMEUG00000011908	TSEN54	99	41.176	Notamacropus_eugenii
ENSACLG00000019800	tsen54	96	42.913	ENSOPRG00000012513	TSEN54	96	42.270	Ochotona_princeps
ENSACLG00000019800	tsen54	100	95.517	ENSONIG00000009543	tsen54	100	95.517	Oreochromis_niloticus
ENSACLG00000019800	tsen54	96	42.125	ENSOCUG00000009875	TSEN54	97	42.166	Oryctolagus_cuniculus
ENSACLG00000019800	tsen54	100	65.049	ENSORLG00000000852	tsen54	100	65.107	Oryzias_latipes
ENSACLG00000019800	tsen54	100	65.437	ENSORLG00020018221	tsen54	100	65.497	Oryzias_latipes_hni
ENSACLG00000019800	tsen54	98	66.203	ENSORLG00015009413	tsen54	99	66.267	Oryzias_latipes_hsok
ENSACLG00000019800	tsen54	100	66.277	ENSOMEG00000014402	tsen54	97	66.277	Oryzias_melastigma
ENSACLG00000019800	tsen54	96	44.316	ENSOGAG00000001442	TSEN54	97	44.380	Otolemur_garnettii
ENSACLG00000019800	tsen54	86	41.756	ENSOARG00000010361	TSEN54	99	41.978	Ovis_aries
ENSACLG00000019800	tsen54	94	45.635	ENSPPAG00000043519	TSEN54	99	46.032	Pan_paniscus
ENSACLG00000019800	tsen54	96	45.385	ENSPPRG00000009162	TSEN54	97	45.905	Panthera_pardus
ENSACLG00000019800	tsen54	86	44.708	ENSPTIG00000019312	TSEN54	96	44.924	Panthera_tigris_altaica
ENSACLG00000019800	tsen54	96	46.332	ENSPTRG00000009646	TSEN54	97	46.743	Pan_troglodytes
ENSACLG00000019800	tsen54	96	46.332	ENSPANG00000020133	TSEN54	88	56.173	Papio_anubis
ENSACLG00000019800	tsen54	99	53.734	ENSPKIG00000023018	tsen54	99	54.098	Paramormyrops_kingsleyae
ENSACLG00000019800	tsen54	80	44.676	ENSPSIG00000012807	TSEN54	100	43.750	Pelodiscus_sinensis
ENSACLG00000019800	tsen54	93	49.068	ENSPMGG00000019578	tsen54	100	49.068	Periophthalmus_magnuspinnatus
ENSACLG00000019800	tsen54	96	45.507	ENSPEMG00000014857	Tsen54	97	45.698	Peromyscus_maniculatus_bairdii
ENSACLG00000019800	tsen54	100	69.143	ENSPFOG00000022740	tsen54	100	69.143	Poecilia_formosa
ENSACLG00000019800	tsen54	100	69.290	ENSPLAG00000014847	tsen54	100	69.290	Poecilia_latipinna
ENSACLG00000019800	tsen54	100	69.098	ENSPMEG00000022876	tsen54	100	69.098	Poecilia_mexicana
ENSACLG00000019800	tsen54	100	68.906	ENSPREG00000013090	tsen54	100	68.906	Poecilia_reticulata
ENSACLG00000019800	tsen54	91	45.455	ENSPPYG00000008629	TSEN54	99	46.947	Pongo_abelii
ENSACLG00000019800	tsen54	92	41.152	ENSPCAG00000002093	TSEN54	96	41.152	Procavia_capensis
ENSACLG00000019800	tsen54	96	44.553	ENSPCOG00000027880	TSEN54	97	45.648	Propithecus_coquereli
ENSACLG00000019800	tsen54	96	44.828	ENSPVAG00000008446	TSEN54	97	45.298	Pteropus_vampyrus
ENSACLG00000019800	tsen54	94	97.526	ENSPNYG00000010217	tsen54	100	97.526	Pundamilia_nyererei
ENSACLG00000019800	tsen54	98	54.808	ENSPNAG00000003770	tsen54	98	54.826	Pygocentrus_nattereri
ENSACLG00000019800	tsen54	96	45.298	ENSRNOG00000004598	Tsen54	97	45.298	Rattus_norvegicus
ENSACLG00000019800	tsen54	96	46.243	ENSRBIG00000043040	TSEN54	92	54.335	Rhinopithecus_bieti
ENSACLG00000019800	tsen54	96	46.243	ENSRROG00000030797	TSEN54	97	46.169	Rhinopithecus_roxellana
ENSACLG00000019800	tsen54	96	43.107	ENSSBOG00000013543	TSEN54	96	43.738	Saimiri_boliviensis_boliviensis
ENSACLG00000019800	tsen54	96	44.340	ENSSHAG00000018127	TSEN54	96	44.423	Sarcophilus_harrisii
ENSACLG00000019800	tsen54	80	53.774	ENSSFOG00015004093	tsen54	99	54.118	Scleropages_formosus
ENSACLG00000019800	tsen54	97	70.874	ENSSMAG00000012449	tsen54	98	71.068	Scophthalmus_maximus
ENSACLG00000019800	tsen54	100	76.471	ENSSDUG00000021506	tsen54	100	77.230	Seriola_dumerili
ENSACLG00000019800	tsen54	100	76.281	ENSSLDG00000016303	tsen54	100	77.040	Seriola_lalandi_dorsalis
ENSACLG00000019800	tsen54	79	43.155	ENSSPUG00000008988	TSEN54	98	42.597	Sphenodon_punctatus
ENSACLG00000019800	tsen54	93	75.615	ENSSPAG00000008098	-	100	75.615	Stegastes_partitus
ENSACLG00000019800	tsen54	81	69.031	ENSSPAG00000008047	tsen54	100	69.031	Stegastes_partitus
ENSACLG00000019800	tsen54	96	45.472	ENSSSCG00000036852	TSEN54	97	45.472	Sus_scrofa
ENSACLG00000019800	tsen54	86	45.254	ENSTGUG00000008548	TSEN54	99	44.835	Taeniopygia_guttata
ENSACLG00000019800	tsen54	100	68.093	ENSTRUG00000004230	tsen54	100	68.093	Takifugu_rubripes
ENSACLG00000019800	tsen54	96	65.269	ENSTNIG00000011281	tsen54	98	65.936	Tetraodon_nigroviridis
ENSACLG00000019800	tsen54	86	42.672	ENSTTRG00000015828	TSEN54	99	42.950	Tursiops_truncatus
ENSACLG00000019800	tsen54	80	41.876	ENSUAMG00000010045	TSEN54	99	41.591	Ursus_americanus
ENSACLG00000019800	tsen54	83	43.237	ENSUMAG00000008979	TSEN54	99	43.018	Ursus_maritimus
ENSACLG00000019800	tsen54	96	45.243	ENSVVUG00000011411	TSEN54	97	45.401	Vulpes_vulpes
ENSACLG00000019800	tsen54	97	44.942	ENSXETG00000012532	tsen54	100	62.500	Xenopus_tropicalis
ENSACLG00000019800	tsen54	97	60.643	ENSXCOG00000018245	tsen54	100	63.549	Xiphophorus_couchianus
ENSACLG00000019800	tsen54	100	68.945	ENSXMAG00000018818	tsen54	100	68.945	Xiphophorus_maculatus