EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000019871 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 7577 bases
Position: chr12:2780757-2788333
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000029329	Transposase_22	PF02994.14	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000030016	-	954	-	ENSACLP00000029329	317 (aa)	-	-

Gene Model

Click here to download ENSACLG00000019871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000019871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000019871	-	56	37.158	ENSACLG00000014552	-	73	37.158
ENSACLG00000019871	-	53	35.503	ENSACLG00000015122	-	52	35.503
ENSACLG00000019871	-	53	36.686	ENSACLG00000006745	-	55	36.686
ENSACLG00000019871	-	53	36.047	ENSACLG00000002811	-	74	36.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000019871	-	50	40.127	ENSACIG00000023411	-	58	40.127	Amphilophus_citrinellus
ENSACLG00000019871	-	60	34.158	ENSELUG00000014404	-	73	34.158	Esox_lucius
ENSACLG00000019871	-	56	41.341	ENSKMAG00000016728	-	61	41.341	Kryptolebias_marmoratus
ENSACLG00000019871	-	51	45.238	ENSPFOG00000020770	-	54	45.238	Poecilia_formosa
ENSACLG00000019871	-	52	43.373	ENSPNYG00000001982	-	66	43.373	Pundamilia_nyererei