EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000020159 (Gene tree)
Gene ID: 113025848
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 50870 bases
Position: chr7:24989107-25039976
Accession: 113025848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000029778	DRY_EERY	PF09750.9	1.5e-31	1	1
ENSACLP00000029873	DRY_EERY	PF09750.9	1.5e-31	1	1
ENSACLP00000029832	DRY_EERY	PF09750.9	1.6e-31	1	1
ENSACLP00000029751	DRY_EERY	PF09750.9	1.6e-31	1	1
ENSACLP00000029778	Surp	PF01805.20	2.9e-28	1	2
ENSACLP00000029778	Surp	PF01805.20	2.9e-28	2	2
ENSACLP00000029873	Surp	PF01805.20	3e-28	1	2
ENSACLP00000029873	Surp	PF01805.20	3e-28	2	2
ENSACLP00000029751	Surp	PF01805.20	3.3e-28	1	2
ENSACLP00000029751	Surp	PF01805.20	3.3e-28	2	2
ENSACLP00000029832	Surp	PF01805.20	3.3e-28	1	2
ENSACLP00000029832	Surp	PF01805.20	3.3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000030577	-	7990	-	ENSACLP00000029873	911 (aa)	-	-
ENSACLT00000030482	-	3141	-	ENSACLP00000029778	907 (aa)	-	-
ENSACLT00000030535	-	8107	-	ENSACLP00000029832	950 (aa)	-	-
ENSACLT00000030455	-	3273	-	ENSACLP00000029751	951 (aa)	XP_026029830	UPI000329E3FF

Gene Model

Click here to download ENSACLG00000020159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000020159's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000020159	sfswap	85	68.097	ENSG00000061936	SFSWAP	84	66.346	Homo_sapiens
ENSACLG00000020159	sfswap	100	97.826	ENSAPOG00000005784	sfswap	75	97.826	Acanthochromis_polyacanthus
ENSACLG00000020159	sfswap	95	52.155	ENSAMEG00000013818	SFSWAP	73	60.174	Ailuropoda_melanoleuca
ENSACLG00000020159	sfswap	100	85.146	ENSAOCG00000016469	sfswap	75	86.408	Amphiprion_ocellaris
ENSACLG00000020159	sfswap	100	85.146	ENSAPEG00000004965	sfswap	76	86.685	Amphiprion_percula
ENSACLG00000020159	sfswap	79	81.843	ENSATEG00000021053	sfswap	89	77.579	Anabas_testudineus
ENSACLG00000020159	sfswap	67	58.716	ENSACAG00000007220	SFSWAP	72	56.732	Anolis_carolinensis
ENSACLG00000020159	sfswap	97	52.995	ENSANAG00000001518	SFSWAP	73	59.034	Aotus_nancymaae
ENSACLG00000020159	sfswap	74	66.760	ENSAMXG00000008657	sfswap	72	65.915	Astyanax_mexicanus
ENSACLG00000020159	sfswap	83	59.397	ENSBTAG00000000439	SFSWAP	77	58.587	Bos_taurus
ENSACLG00000020159	sfswap	97	52.690	ENSCJAG00000003613	SFSWAP	77	58.723	Callithrix_jacchus
ENSACLG00000020159	sfswap	97	50.552	ENSCAFG00000006625	SFSWAP	71	59.596	Canis_familiaris
ENSACLG00000020159	sfswap	87	43.853	ENSCAFG00020011254	SFSWAP	68	52.930	Canis_lupus_dingo
ENSACLG00000020159	sfswap	83	59.684	ENSCHIG00000008838	SFSWAP	72	60.086	Capra_hircus
ENSACLG00000020159	sfswap	86	66.978	ENSCAPG00000004394	SFSWAP	69	59.153	Cavia_aperea
ENSACLG00000020159	sfswap	93	65.365	ENSCPOG00000005280	SFSWAP	73	59.116	Cavia_porcellus
ENSACLG00000020159	sfswap	91	68.508	ENSCCAG00000037255	SFSWAP	72	59.307	Cebus_capucinus
ENSACLG00000020159	sfswap	91	68.508	ENSCATG00000031094	SFSWAP	73	59.091	Cercocebus_atys
ENSACLG00000020159	sfswap	77	60.317	ENSCHOG00000003578	SFSWAP	64	60.317	Choloepus_hoffmanni
ENSACLG00000020159	sfswap	83	59.463	ENSCPBG00000024757	SFSWAP	77	60.169	Chrysemys_picta_bellii
ENSACLG00000020159	sfswap	91	68.232	ENSCANG00000036501	SFSWAP	73	58.949	Colobus_angolensis_palliatus
ENSACLG00000020159	sfswap	84	66.848	ENSCGRG00001011284	Sfswap	74	58.665	Cricetulus_griseus_chok1gshd
ENSACLG00000020159	sfswap	84	66.848	ENSCGRG00000017417	Sfswap	74	58.665	Cricetulus_griseus_crigri
ENSACLG00000020159	sfswap	80	76.223	ENSCSEG00000003773	sfswap	98	71.987	Cynoglossus_semilaevis
ENSACLG00000020159	sfswap	71	64.507	ENSCVAG00000001205	-	70	72.360	Cyprinodon_variegatus
ENSACLG00000020159	sfswap	74	69.275	ENSDARG00000005980	sfswap	73	67.416	Danio_rerio
ENSACLG00000020159	sfswap	87	53.754	ENSDNOG00000018742	SFSWAP	69	59.249	Dasypus_novemcinctus
ENSACLG00000020159	sfswap	97	48.020	ENSDORG00000010352	Sfswap	72	52.436	Dipodomys_ordii
ENSACLG00000020159	sfswap	69	32.475	FBgn0003638	su(w[a])	56	57.303	Drosophila_melanogaster
ENSACLG00000020159	sfswap	85	33.508	ENSEBUG00000016748	SFSWAP	76	36.932	Eptatretus_burgeri
ENSACLG00000020159	sfswap	97	53.211	ENSEASG00005016502	SFSWAP	74	58.832	Equus_asinus_asinus
ENSACLG00000020159	sfswap	96	52.923	ENSECAG00000007657	SFSWAP	74	58.832	Equus_caballus
ENSACLG00000020159	sfswap	83	51.499	ENSEEUG00000001713	SFSWAP	71	50.697	Erinaceus_europaeus
ENSACLG00000020159	sfswap	88	63.624	ENSELUG00000010942	sfswap	94	63.636	Esox_lucius
ENSACLG00000020159	sfswap	97	52.594	ENSFCAG00000010778	SFSWAP	73	58.916	Felis_catus
ENSACLG00000020159	sfswap	70	59.424	ENSFALG00000009577	SFSWAP	70	59.794	Ficedula_albicollis
ENSACLG00000020159	sfswap	99	51.032	ENSFDAG00000017235	SFSWAP	73	58.807	Fukomys_damarensis
ENSACLG00000020159	sfswap	51	82.877	ENSGMOG00000009205	sfswap	69	82.877	Gadus_morhua
ENSACLG00000020159	sfswap	81	79.296	ENSGAFG00000006272	sfswap	81	78.919	Gambusia_affinis
ENSACLG00000020159	sfswap	70	89.655	ENSGACG00000017647	sfswap	92	68.314	Gasterosteus_aculeatus
ENSACLG00000020159	sfswap	83	59.605	ENSGAGG00000002611	SFSWAP	77	59.831	Gopherus_agassizii
ENSACLG00000020159	sfswap	77	68.464	ENSGGOG00000014877	SFSWAP	73	59.310	Gorilla_gorilla
ENSACLG00000020159	sfswap	100	97.930	ENSHBUG00000005629	sfswap	100	97.930	Haplochromis_burtoni
ENSACLG00000020159	sfswap	91	67.680	ENSHGLG00000019216	SFSWAP	73	59.639	Heterocephalus_glaber_female
ENSACLG00000020159	sfswap	91	67.867	ENSHGLG00100019350	SFSWAP	73	59.778	Heterocephalus_glaber_male
ENSACLG00000020159	sfswap	100	69.990	ENSHCOG00000009475	sfswap	77	72.715	Hippocampus_comes
ENSACLG00000020159	sfswap	85	69.899	ENSIPUG00000010598	sfswap	82	65.912	Ictalurus_punctatus
ENSACLG00000020159	sfswap	69	60.000	ENSSTOG00000000773	SFSWAP	73	58.506	Ictidomys_tridecemlineatus
ENSACLG00000020159	sfswap	87	58.693	ENSJJAG00000006609	Sfswap	74	58.921	Jaculus_jaculus
ENSACLG00000020159	sfswap	79	80.880	ENSKMAG00000013168	sfswap	75	81.018	Kryptolebias_marmoratus
ENSACLG00000020159	sfswap	76	80.171	ENSLBEG00000010239	sfswap	78	80.456	Labrus_bergylta
ENSACLG00000020159	sfswap	70	60.292	ENSLACG00000018678	SFSWAP	69	59.455	Latimeria_chalumnae
ENSACLG00000020159	sfswap	100	55.501	ENSLOCG00000006202	sfswap	76	62.701	Lepisosteus_oculatus
ENSACLG00000020159	sfswap	95	53.021	ENSMFAG00000037352	SFSWAP	70	58.949	Macaca_fascicularis
ENSACLG00000020159	sfswap	97	53.604	ENSMMUG00000020343	SFSWAP	73	58.949	Macaca_mulatta
ENSACLG00000020159	sfswap	97	53.604	ENSMNEG00000041002	SFSWAP	73	58.949	Macaca_nemestrina
ENSACLG00000020159	sfswap	91	65.460	ENSMLEG00000035728	SFSWAP	73	57.632	Mandrillus_leucophaeus
ENSACLG00000020159	sfswap	100	80.938	ENSMAMG00000006631	sfswap	76	84.078	Mastacembelus_armatus
ENSACLG00000020159	sfswap	100	100.000	ENSMZEG00005017834	SFSWAP	100	100.000	Maylandia_zebra
ENSACLG00000020159	sfswap	84	62.187	ENSMODG00000015581	SFSWAP	68	55.075	Monodelphis_domestica
ENSACLG00000020159	sfswap	80	93.182	ENSMALG00000012603	sfswap	82	79.201	Monopterus_albus
ENSACLG00000020159	sfswap	84	67.209	MGP_CAROLIEiJ_G0027780	Sfswap	84	64.423	Mus_caroli
ENSACLG00000020159	sfswap	91	67.778	ENSMUSG00000029439	Sfswap	84	64.423	Mus_musculus
ENSACLG00000020159	sfswap	93	65.183	MGP_PahariEiJ_G0024360	Sfswap	84	65.385	Mus_pahari
ENSACLG00000020159	sfswap	84	67.209	MGP_SPRETEiJ_G0028779	Sfswap	84	64.423	Mus_spretus
ENSACLG00000020159	sfswap	80	65.946	ENSMPUG00000002218	SFSWAP	73	58.414	Mustela_putorius_furo
ENSACLG00000020159	sfswap	71	59.942	ENSMLUG00000011296	SFSWAP	77	59.167	Myotis_lucifugus
ENSACLG00000020159	sfswap	69	59.317	ENSNGAG00000018167	Sfswap	74	57.750	Nannospalax_galili
ENSACLG00000020159	sfswap	94	98.107	ENSNBRG00000020857	sfswap	100	98.107	Neolamprologus_brichardi
ENSACLG00000020159	sfswap	95	52.911	ENSNLEG00000008386	SFSWAP	74	60.333	Nomascus_leucogenys
ENSACLG00000020159	sfswap	75	58.824	ENSOPRG00000006983	-	68	53.055	Ochotona_princeps
ENSACLG00000020159	sfswap	100	94.136	ENSONIG00000003757	sfswap	99	96.495	Oreochromis_niloticus
ENSACLG00000020159	sfswap	79	79.586	ENSORLG00000010983	sfswap	77	79.448	Oryzias_latipes
ENSACLG00000020159	sfswap	79	79.724	ENSORLG00020010779	sfswap	77	79.586	Oryzias_latipes_hni
ENSACLG00000020159	sfswap	79	80.028	ENSORLG00015023093	sfswap	77	79.890	Oryzias_latipes_hsok
ENSACLG00000020159	sfswap	79	81.145	ENSOMEG00000022065	sfswap	77	81.276	Oryzias_melastigma
ENSACLG00000020159	sfswap	83	59.684	ENSOARG00000014314	SFSWAP	74	58.726	Ovis_aries
ENSACLG00000020159	sfswap	91	68.508	ENSPPAG00000036706	SFSWAP	76	59.310	Pan_paniscus
ENSACLG00000020159	sfswap	97	50.532	ENSPPRG00000017318	SFSWAP	69	59.098	Panthera_pardus
ENSACLG00000020159	sfswap	96	51.196	ENSPTIG00000004304	SFSWAP	70	63.969	Panthera_tigris_altaica
ENSACLG00000020159	sfswap	91	69.382	ENSPTRG00000005640	SFSWAP	76	59.310	Pan_troglodytes
ENSACLG00000020159	sfswap	91	68.508	ENSPANG00000019737	SFSWAP	73	59.091	Papio_anubis
ENSACLG00000020159	sfswap	76	65.241	ENSPKIG00000008327	sfswap	76	65.884	Paramormyrops_kingsleyae
ENSACLG00000020159	sfswap	66	64.103	ENSPEMG00000001237	Sfswap	74	58.156	Peromyscus_maniculatus_bairdii
ENSACLG00000020159	sfswap	50	52.258	ENSPMAG00000008279	sfswap	99	54.241	Petromyzon_marinus
ENSACLG00000020159	sfswap	95	52.270	ENSPCIG00000006062	SFSWAP	68	60.389	Phascolarctos_cinereus
ENSACLG00000020159	sfswap	100	76.255	ENSPFOG00000019657	sfswap	79	79.865	Poecilia_formosa
ENSACLG00000020159	sfswap	81	79.865	ENSPLAG00000008513	sfswap	79	79.865	Poecilia_latipinna
ENSACLG00000020159	sfswap	79	80.753	ENSPMEG00000008716	sfswap	79	79.892	Poecilia_mexicana
ENSACLG00000020159	sfswap	81	79.459	ENSPREG00000006692	sfswap	79	79.487	Poecilia_reticulata
ENSACLG00000020159	sfswap	91	68.508	ENSPPYG00000005129	SFSWAP	74	59.375	Pongo_abelii
ENSACLG00000020159	sfswap	53	61.460	ENSPCAG00000004977	-	59	57.800	Procavia_capensis
ENSACLG00000020159	sfswap	91	67.127	ENSPCOG00000023786	SFSWAP	72	58.906	Propithecus_coquereli
ENSACLG00000020159	sfswap	75	65.882	ENSPVAG00000014918	SFSWAP	61	65.882	Pteropus_vampyrus
ENSACLG00000020159	sfswap	100	97.234	ENSPNYG00000012660	sfswap	100	97.029	Pundamilia_nyererei
ENSACLG00000020159	sfswap	70	66.385	ENSPNAG00000007073	sfswap	73	69.048	Pygocentrus_nattereri
ENSACLG00000020159	sfswap	91	67.778	ENSRNOG00000000931	Sfswap	98	43.952	Rattus_norvegicus
ENSACLG00000020159	sfswap	90	67.925	ENSRBIG00000036330	SFSWAP	72	58.466	Rhinopithecus_bieti
ENSACLG00000020159	sfswap	85	67.560	ENSRROG00000032001	SFSWAP	73	59.091	Rhinopithecus_roxellana
ENSACLG00000020159	sfswap	97	52.703	ENSSBOG00000026217	SFSWAP	78	56.217	Saimiri_boliviensis_boliviensis
ENSACLG00000020159	sfswap	93	50.784	ENSSHAG00000014232	SFSWAP	73	58.931	Sarcophilus_harrisii
ENSACLG00000020159	sfswap	69	69.055	ENSSFOG00015000766	sfswap	70	68.902	Scleropages_formosus
ENSACLG00000020159	sfswap	79	79.098	ENSSMAG00000018718	sfswap	76	79.235	Scophthalmus_maximus
ENSACLG00000020159	sfswap	79	84.848	ENSSDUG00000021680	sfswap	74	84.848	Seriola_dumerili
ENSACLG00000020159	sfswap	79	84.573	ENSSLDG00000010835	sfswap	74	84.573	Seriola_lalandi_dorsalis
ENSACLG00000020159	sfswap	70	69.643	ENSSARG00000000424	SFSWAP	74	59.472	Sorex_araneus
ENSACLG00000020159	sfswap	73	53.731	ENSSPUG00000010272	SFSWAP	70	56.529	Sphenodon_punctatus
ENSACLG00000020159	sfswap	79	85.000	ENSSPAG00000014310	sfswap	98	79.498	Stegastes_partitus
ENSACLG00000020159	sfswap	83	62.115	ENSSSCG00000009744	SFSWAP	87	52.212	Sus_scrofa
ENSACLG00000020159	sfswap	71	61.484	ENSTGUG00000004623	SFSWAP	73	61.245	Taeniopygia_guttata
ENSACLG00000020159	sfswap	73	66.486	ENSTTRG00000013478	SFSWAP	73	54.558	Tursiops_truncatus
ENSACLG00000020159	sfswap	95	51.658	ENSUAMG00000016807	SFSWAP	73	58.646	Ursus_americanus
ENSACLG00000020159	sfswap	71	58.153	ENSUMAG00000002957	SFSWAP	75	60.000	Ursus_maritimus
ENSACLG00000020159	sfswap	83	60.825	ENSVVUG00000010753	SFSWAP	71	59.596	Vulpes_vulpes
ENSACLG00000020159	sfswap	83	54.806	ENSXETG00000009350	sfswap	88	58.482	Xenopus_tropicalis
ENSACLG00000020159	sfswap	79	80.636	ENSXMAG00000009020	sfswap	79	80.135	Xiphophorus_maculatus