EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000020185 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 2034 bases
Position: chr2:33980253-33982286
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000029777	RVT_1	PF00078.27	1.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000030481	-	2034	-	ENSACLP00000029777	677 (aa)	-	-

Gene Model

Click here to download ENSACLG00000020185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000020185's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000020185	-	98	45.195	ENSACLG00000024387	-	54	45.195
ENSACLG00000020185	-	86	31.040	ENSACLG00000005847	-	76	31.040
ENSACLG00000020185	-	66	49.333	ENSACLG00000012278	-	57	49.333
ENSACLG00000020185	-	91	46.130	ENSACLG00000023495	-	51	46.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000020185	-	85	34.122	ENSAMXG00000037637	-	92	34.122	Astyanax_mexicanus
ENSACLG00000020185	-	86	43.121	ENSLACG00000016114	-	53	43.121	Latimeria_chalumnae
ENSACLG00000020185	-	89	32.372	ENSMALG00000004164	-	97	32.372	Monopterus_albus
ENSACLG00000020185	-	95	45.714	ENSMALG00000014073	-	91	45.714	Monopterus_albus
ENSACLG00000020185	-	86	74.403	ENSORLG00000028047	-	90	74.403	Oryzias_latipes
ENSACLG00000020185	-	87	45.363	ENSORLG00000021828	-	72	45.363	Oryzias_latipes
ENSACLG00000020185	-	88	30.065	ENSPKIG00000018433	-	92	30.065	Paramormyrops_kingsleyae