EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000020380 (Gene tree)
Gene ID: 113021963
Gene Symbol: rbck1
Alias: zgc:91964
Full Name: RANBP2-type and C3HC4-type zinc finger containing 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 9878 bases
Position: chr5:5874791-5884668
Accession: 113021963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000030081	zf-RanBP	PF00641.18	4.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000030790	-	5037	-	ENSACLP00000030081	519 (aa)	XP_026022666	UPI000E40BCB5

Gene Model

Click here to download ENSACLG00000020380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000020380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000020380	rbck1	98	44.280	ENSACLG00000022609	shrprbck1r	76	44.925

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000020380	rbck1	98	58.447	ENSAMXG00000004941	rbck1	98	58.301	Astyanax_mexicanus
ENSACLG00000020380	rbck1	100	76.731	ENSCVAG00000002649	rbck1	100	76.731	Cyprinodon_variegatus
ENSACLG00000020380	rbck1	98	63.883	ENSELUG00000022786	rbck1	96	63.689	Esox_lucius
ENSACLG00000020380	rbck1	100	78.077	ENSFHEG00000016918	rbck1	100	77.692	Fundulus_heteroclitus
ENSACLG00000020380	rbck1	100	99.422	ENSHBUG00000008208	rbck1	100	99.422	Haplochromis_burtoni
ENSACLG00000020380	rbck1	100	99.807	ENSMZEG00005005317	rbck1	100	99.807	Maylandia_zebra
ENSACLG00000020380	rbck1	84	96.101	ENSNBRG00000006179	rbck1	91	96.101	Neolamprologus_brichardi
ENSACLG00000020380	rbck1	98	96.450	ENSONIG00000006803	rbck1	99	96.450	Oreochromis_niloticus
ENSACLG00000020380	rbck1	99	98.054	ENSPNYG00000012666	rbck1	99	98.054	Pundamilia_nyererei
ENSACLG00000020380	rbck1	100	81.714	ENSSDUG00000023631	rbck1	100	81.939	Seriola_dumerili
ENSACLG00000020380	rbck1	100	81.679	ENSSLDG00000008305	rbck1	100	81.179	Seriola_lalandi_dorsalis
ENSACLG00000020380	rbck1	99	81.190	ENSSPAG00000009432	rbck1	100	80.880	Stegastes_partitus